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Search results 1 to 100 out of 108 for Surf4

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Hits by Pathway

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Hits by Strain

Type Details Score
Gene
6836 | SURF4
Type: gene
Organism: human
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Gene
493450 | surf4
Type: gene
Organism: frog, western clawed
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Gene
619346 | Surf4
Type: gene
Organism: rat
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Gene
491269 | SURF4
Type: gene
Organism: dog, domestic
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Gene
526045 | SURF4
Type: gene
Organism: cattle
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Gene
100608057 | SURF4
Type: gene
Organism: chimpanzee
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Gene
374273 | SURF4
Type: gene
Organism: chicken
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Gene
394102 | surf4
Type: gene
Organism: zebrafish
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Gene
100429963 | SURF4
Type: gene
Organism: macaque, rhesus
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Protein Domain
IPR002995 | Surf4
Type: Family
Description: The surfeit locus gene SURF4 (or surf-4) encodes a conserved integral eukaryotic membrane protein of about 270 to 300 amino-acid residues that seems to be located in the endoplasmic reticulum [].
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Protein Coding Gene
MGI:98445 | Surf4
Type: protein_coding_gene
Organism: mouse, laboratory
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GXD Expression
GXD Expression
 
Probe: MGI:216619
Assay Type: RNA in situ
Annotation Date: 2009-01-15
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:3564922
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:3826128
Age: embryonic day 14.5
Image: Additional file 4 Surf4
Specimen Label: Additional file 4 Surf4
Detected: true
Specimen Num: 1
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Publication
7540914 | J:28355
First Author: Reeves JE
Year: 1995
Journal: Mol Membr Biol
Title: The surf-4 gene encodes a novel 30 kDa integral membrane protein.
Volume: 12
Issue: 2
Pages: 201-8
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Publication
31978056 | J:284050
First Author: Emmer BT
Year: 2020
Journal: PLoS One
Title: Murine Surf4 is essential for early embryonic development.
Volume: 15
Issue: 1
Pages: e0227450
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Publication
38042368 | J:343810
 
First Author: Guo CG
Year: 2023
Journal: Mol Metab
Title: Intestinal SURF4 is essential for apolipoprotein transport and lipoprotein secretion.
Volume: 79
Pages: 101847
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Publication
36193893 | J:330402
   
First Author: Tang VT
Year: 2022
Journal: Elife
Title: Hepatic inactivation of murine <i>Surf4</i> results in marked reduction in plasma cholesterol.
Volume: 11
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Protein
Q64310
Organism: Mus musculus/domesticus
Length: 269  
Fragment?: false
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Protein
Q545Q2
Organism: Mus musculus/domesticus
Length: 269  
Fragment?: false
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Protein
F7CH13
Organism: Mus musculus/domesticus
Length: 124  
Fragment?: true
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Protein
E0CXD9
Organism: Mus musculus/domesticus
Length: 82  
Fragment?: false
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Protein
Q3U7E6
Organism: Mus musculus/domesticus
Length: 269  
Fragment?: false
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Publication
33186557 | J:302969
First Author: Wang X
Year: 2021
Journal: Cell Metab
Title: Receptor-Mediated ER Export of Lipoproteins Controls Lipid Homeostasis in Mice and Humans.
Volume: 33
Issue: 2
Pages: 350-366.e7
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Publication
8586415 | J:29914
First Author: Garson K
Year: 1995
Journal: Genomics
Title: Surf5: a gene in the tightly clustered mouse surfeit locus is highly conserved and transcribed divergently from the rpL7A (Surf3) gene.
Volume: 30
Issue: 2
Pages: 163-70
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Publication
34118252 | J:331531
 
First Author: Wang B
Year: 2021
Journal: J Lipid Res
Title: Atherosclerosis-associated hepatic secretion of VLDL but not PCSK9 is dependent on cargo receptor protein Surf4.
Volume: 62
Pages: 100091
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Protein Coding Gene
MGP_CAROLIEiJ_G0023330 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0025502 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0025479 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0025449 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0025475 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0025236 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_98445 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0025919 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0024699 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0025214 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0025347 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0025309 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0025433 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0025340 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0025978 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0024447 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0024768 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0024787 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0024247 | -
Type: protein_coding_gene
Organism: Mus spretus
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Publication
11316816 | J:70135
First Author: Caldwell SR
Year: 2001
Journal: J Biol Chem
Title: Degradation of endoplasmic reticulum (ER) quality control substrates requires transport between the ER and Golgi.
Volume: 276
Issue: 26
Pages: 23296-303
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GXD Expression
GXD Expression
     
Probe: MGI:2651415
Assay Type: RT-PCR
Annotation Date: 2003-03-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603911
Stage: TS11
Assay Id: MGI:2651435
Age: embryonic day 7.5
Specimen Label: +/+
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:2651415
Assay Type: RT-PCR
Annotation Date: 2003-03-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603911
Stage: TS11
Assay Id: MGI:2651435
Age: embryonic day 7.5
Specimen Label: -/-
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:2651415
Assay Type: RT-PCR
Annotation Date: 2003-03-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603911
Stage: TS11
Assay Id: MGI:2651435
Age: embryonic day 7.5
Specimen Label: -/-
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
     
Probe: MGI:2651415
Assay Type: RT-PCR
Annotation Date: 2003-03-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603911
Stage: TS11
Assay Id: MGI:2651435
Age: embryonic day 7.5
Specimen Label: -/-
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
     
Probe: MGI:2651415
Assay Type: RT-PCR
Annotation Date: 2003-03-17
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1603911
Stage: TS11
Assay Id: MGI:2651435
Age: embryonic day 7.5
Specimen Label: -/-
Detected: true
Specimen Num: 5
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Publication
37884645 | J:342001
First Author: Wang X
Year: 2023
Journal: Nat Cell Biol
Title: Manganese regulation of COPII condensation controls circulating lipid homeostasis.
Volume: 25
Issue: 11
Pages: 1650-1663
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Publication
39499573 | J:360800
 
First Author: Everett LA
Year: 2024
Journal: JCI Insight
Title: LMAN1 serves as a cargo receptor for thrombopoietin.
Volume: 9
Issue: 24
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Publication
2300057 | J:10274
First Author: Huxley C
Year: 1990
Journal: Mol Cell Biol
Title: The mouse surfeit locus contains a cluster of six genes associated with four CpG-rich islands in 32 kilobases of genomic DNA.
Volume: 10
Issue: 2
Pages: 605-14
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Publication
8639267 | J:32572
First Author: Magoulas C
Year: 1996
Journal: DNA Cell Biol
Title: The Surf-6 gene of the mouse surfeit locus encodes a novel nucleolar protein.
Volume: 15
Issue: 4
Pages: 305-16
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Publication
8280054 | J:16324
 
First Author: Yu LC
Year: 1993
Journal: Biochem J
Title: Primary structure and characterization of an androgen-stimulated autoantigen purified from mouse seminal-vesicle secretion.
Volume: 296 ( Pt 3)
Pages: 571-6
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Publication
34015269 | J:316120
First Author: Huang D
Year: 2021
Journal: Cell Metab
Title: TMEM41B acts as an ER scramblase required for lipoprotein biogenesis and lipid homeostasis.
Volume: 33
Issue: 8
Pages: 1655-1670.e8
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Publication
2648130 | J:9681
First Author: Giallongo A
Year: 1989
Journal: Mol Cell Biol
Title: Ribosomal protein L7a is encoded by a gene (Surf-3) within the tightly clustered mouse surfeit locus.
Volume: 9
Issue: 1
Pages: 224-31
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Publication
21976701 | J:235257
First Author: Matsuzaki F
Year: 2011
Journal: Mol Biol Cell
Title: Protrudin serves as an adaptor molecule that connects KIF5 and its cargoes in vesicular transport during process formation.
Volume: 22
Issue: 23
Pages: 4602-20
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Publication
12566387 | J:81773
First Author: Agostino A
Year: 2003
Journal: Hum Mol Genet
Title: Constitutive knockout of Surf1 is associated with high embryonic lethality, mitochondrial disease and cytochrome c oxidase deficiency in mice.
Volume: 12
Issue: 4
Pages: 399-413
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Publication
18554416 | J:139177
First Author: Hoffman BG
Year: 2008
Journal: Genome Biol
Title: Identification of transcripts with enriched expression in the developing and adult pancreas.
Volume: 9
Issue: 6
Pages: R99
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Publication
- | J:15839
       
First Author: International Committee on Standardized Genetic Nomenclature for Mice
Year: 1993
Title: Nomenclature rule change to delete hyphens and parentheses from mouse locus symbols
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Publication
- | J:94790
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Mouse Synonym Curation
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Publication
- | J:188991
     
First Author: The Jackson Laboratory
Year: 2012
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by The Jackson Laboratory
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Publication
- | J:136110
     
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
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Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
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Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:326541
       
First Author: Cyagen Biosciences Inc.
Year: 2022
Title: Cyagen Biosciences Website.
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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HT Experiment
GSE214393 | Hepatic inactivation of murine Surf4 results in marked reduction in plasma cholesterol
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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Publication
34859075 | J:315151
 
First Author: Chang X
Year: 2021
Journal: Front Cardiovasc Med
Title: Loss of Hepatic Surf4 Depletes Lipid Droplets in the Adrenal Cortex but Does Not Impair Adrenal Hormone Production.
Volume: 8
Pages: 764024
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Publication
36288700 | J:334128
First Author: Stomberski CT
Year: 2022
Journal: Cell Rep
Title: A multienzyme S-nitrosylation cascade regulates cholesterol homeostasis.
Volume: 41
Issue: 4
Pages: 111538
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Publication
32725126 | J:298711
 
First Author: Deng Z
Year: 2020
Journal: J Exp Med
Title: A defect in COPI-mediated transport of STING causes immune dysregulation in COPA syndrome.
Volume: 217
Issue: 11
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Protein Domain
IPR045214 | Surf1/Surf4
Type: Family
Description: This entry includes SURF1 and Shy1 proteins. The surfeit locus 1 gene (SURF1 or surf-1) encodes a conserved protein of about 300 amino-acid residues that seems to be involved in the biogenesis ofcytochrome c oxidase []. Vertebrate SURF1 is evolutionary related to yeastprotein Shy1, which is a mitochondrial inner membrane protein required for assembly of cytochrome c oxidase []. There seems to be two transmembrane regions in these proteins,one in the N-terminal, the other in the C-terminal.Defects in SURF1 are a cause of Leigh syndrome (LS). LS is a severe neurological disorder characterised by bilaterally symmetrical necrotic lesions in subcortical brain regions that is commonly associated with systemic cytochrome c oxidase (COX) deficiency [, , ]. The surfeit locus gene SURF4 (or surf-4) encodes a conserved integral eukaryotic membrane protein of about 270 to 300 amino-acid residues that seems to be located in the endoplasmic reticulum [].
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Protein
P09925
Organism: Mus musculus/domesticus
Length: 306  
Fragment?: false
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Protein
A0A0A6YVY3
Organism: Mus musculus/domesticus
Length: 63  
Fragment?: true
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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