Type |
Details |
Score |
Gene |
Type: |
gene |
Organism: |
human |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
cattle |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chicken |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
zebrafish |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, western clawed |
|
•
•
•
•
•
|
Gene |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
dog, domestic |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chimpanzee |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhou J |
Year: |
2015 |
Journal: |
Hum Mol Genet |
Title: |
Accelerated reproductive aging in females lacking a novel centromere protein SYCP2L. |
Volume: |
24 |
Issue: |
22 |
Pages: |
6505-14 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785010 |
Assay Type: |
RT-PCR |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689428 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785022 |
Age: |
postnatal week 8 |
|
|
Specimen Label: |
brain |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785010 |
Assay Type: |
RT-PCR |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1672828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785022 |
Age: |
postnatal week 8 |
|
|
Specimen Label: |
lung |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785010 |
Assay Type: |
RT-PCR |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1610528 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785022 |
Age: |
postnatal week 8 |
|
|
Specimen Label: |
heart |
Detected: |
false |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785010 |
Assay Type: |
RT-PCR |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1702128 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785022 |
Age: |
postnatal week 8 |
|
|
Specimen Label: |
stomach |
Detected: |
false |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785010 |
Assay Type: |
RT-PCR |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1876728 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785022 |
Age: |
postnatal week 8 |
|
|
Specimen Label: |
spleen |
Detected: |
false |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785010 |
Assay Type: |
RT-PCR |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1684628 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785022 |
Age: |
postnatal week 8 |
|
|
Specimen Label: |
liver |
Detected: |
false |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785010 |
Assay Type: |
RT-PCR |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1737328 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785022 |
Age: |
postnatal week 8 |
|
|
Specimen Label: |
kidney |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785010 |
Assay Type: |
RT-PCR |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1797228 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785022 |
Age: |
postnatal week 8 |
|
|
Specimen Label: |
testis |
Detected: |
false |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785010 |
Assay Type: |
RT-PCR |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1929028 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785022 |
Age: |
postnatal week 8 |
|
|
Specimen Label: |
epididymis |
Detected: |
false |
Specimen Num: |
9 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785010 |
Assay Type: |
RT-PCR |
Annotation Date: |
2016-07-29 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785022 |
Age: |
postnatal week 8 |
|
|
Specimen Label: |
ovary |
Detected: |
true |
Specimen Num: |
10 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785010 |
Assay Type: |
RT-PCR |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271528 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785022 |
Age: |
postnatal week 8 |
|
|
Specimen Label: |
muscle |
Detected: |
false |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785010 |
Assay Type: |
RT-PCR |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752528 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785022 |
Age: |
postnatal week 8 |
|
|
Specimen Label: |
skin |
Detected: |
false |
Specimen Num: |
12 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Western blot |
Annotation Date: |
2016-08-01 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5787626 |
Age: |
postnatal day 10 |
|
|
Specimen Label: |
+/+ |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Western blot |
Annotation Date: |
2016-08-01 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5787626 |
Age: |
postnatal day 10 |
|
|
Specimen Label: |
+/- |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Western blot |
Annotation Date: |
2016-08-01 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5787626 |
Age: |
postnatal day 10 |
|
|
Specimen Label: |
-/- |
Detected: |
false |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3570528 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal adult |
|
Note: |
Expression was localized in the centromere. |
Specimen Label: |
2E |
Detected: |
true |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3570527 |
Pattern: |
Not Specified |
Stage: |
TS27 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal day 0 |
|
Note: |
Immunostaining was noted in the majority of oocytes and absent from a subset. Expression was nuclear. |
Specimen Label: |
1B |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:3570527 |
|
Stage: |
TS27 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal day 0 |
|
|
Specimen Label: |
1C |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:3570527 |
|
Stage: |
TS27 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal newborn |
|
Note: |
Signal was absent in pachytene stage oocyte. |
Specimen Label: |
2A |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:3570527 |
|
Stage: |
TS27 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal newborn |
|
Note: |
Signal was absent in early diplotene stage oocyte. |
Specimen Label: |
2B |
Detected: |
false |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3570527 |
Pattern: |
Not Specified |
Stage: |
TS27 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal newborn |
|
Note: |
Expression was detected in the synaptonemal complex lateral elements in late diplotene stage oocyte. Signal existed as a pair of bright dots at one end of the lateral elements. |
Specimen Label: |
2C |
Detected: |
true |
Specimen Num: |
9 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3570527 |
Pattern: |
Not Specified |
Stage: |
TS27 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal newborn |
|
Note: |
Expression was localized in the centromere. |
Specimen Label: |
2D |
Detected: |
true |
Specimen Num: |
10 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2896523 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5785023 |
Age: |
embryonic day 15.5 |
|
|
Specimen Label: |
S2 Leptotene |
Detected: |
false |
Specimen Num: |
14 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2896523 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5785023 |
Age: |
embryonic day 15.5 |
|
|
Specimen Label: |
S2 Zygotene |
Detected: |
false |
Specimen Num: |
15 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3075728 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal week 8 |
|
Note: |
Expression was nuclear. |
Specimen Label: |
1D |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3102526 |
Pattern: |
Not Specified |
Stage: |
TS26 |
Assay Id: |
MGI:5785023 |
Age: |
embryonic day 18.5 |
|
Note: |
Expression was localized to the synaptonemal complex in late diplotene oocytes. |
Specimen Label: |
S2 Late diplotene |
Detected: |
true |
Specimen Num: |
16 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2906528 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal week 8 |
|
Note: |
Expression was nuclear. |
Specimen Label: |
1E |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3076528 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal week 8 |
|
Note: |
Expression was nuclear. |
Specimen Label: |
1G |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal day 10 |
|
|
Specimen Label: |
S1C +/+ |
Detected: |
true |
Specimen Num: |
12 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
|
Stage: |
TS28 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal day 10 |
|
|
Specimen Label: |
S1C -/- |
Detected: |
false |
Specimen Num: |
13 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5785012 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2016-07-29 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2986428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:5785023 |
Age: |
postnatal week 8 |
|
Note: |
Expression was nuclear. |
Specimen Label: |
1F |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Mouse Synonym Curation |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
Journal: |
Database Download |
Title: |
Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Function or Process or Component Unknown following Literature Review |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hansen GM |
Year: |
2008 |
Journal: |
Genome Res |
Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
Volume: |
18 |
Issue: |
10 |
Pages: |
1670-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
|
Title: |
Human to Mouse ISO GO annotation transfer |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
253
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Fragment?: |
true |
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Publication |
First Author: |
Kneissel S |
Year: |
2001 |
Journal: |
Mol Biol Cell |
Title: |
A novel karyoskeletal protein: characterization of protein NO145, the major component of nucleolar cortical skeleton in Xenopus oocytes. |
Volume: |
12 |
Issue: |
12 |
Pages: |
3904-18 |
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Protein Domain |
Type: |
Family |
Description: |
This entry includes synaptonemal complex protein 2 (SYCP2) and synaptonemal complex protein 2-like (SYCP2L).SYCP2 is one of the major components of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase [].SYCP2L has partial sequence homology to a SYCP2 and is the major component of nucleolar cortical skeleton in Xenopus oocytes []. In humans, SYCP2L promotes primordial oocytes survival, thus being associated with age at natural menopause (ANM) []. |
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Publication |
First Author: |
Meuwissen RL |
Year: |
1992 |
Journal: |
EMBO J |
Title: |
A coiled-coil related protein specific for synapsed regions of meiotic prophase chromosomes. |
Volume: |
11 |
Issue: |
13 |
Pages: |
5091-100 |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
621
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Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
842
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Fragment?: |
false |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
185
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Fragment?: |
true |
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•
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1500
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Fragment?: |
false |
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•
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