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Search results 1 to 74 out of 74 for Taf1c

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Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
Gene
9013 | TAF1C
Type: gene
Organism: human
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Gene
509238 | TAF1C
Type: gene
Organism: cattle
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Gene
336342 | taf1c
Type: gene
Organism: zebrafish
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Gene
715012 | TAF1C
Type: gene
Organism: macaque, rhesus
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Gene
101750393 | TAF1C
Type: gene
Organism: chicken
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Gene
100496040 | taf1c
Type: gene
Organism: frog, western clawed
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Gene
361420 | Taf1c
Type: gene
Organism: rat
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Gene
609622 | TAF1C
Type: gene
Organism: dog, domestic
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Gene
454279 | TAF1C
Type: gene
Organism: chimpanzee
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Protein Domain
IPR038801 | TAF1C
Type: Family
Description: TAF1C is a component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (preinitiation complex) during RNA polymerase I-dependent transcription [].
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Protein Coding Gene
MGI:109576 | Taf1c
Type: protein_coding_gene
Organism: mouse, laboratory
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Publication
15970593 | -
First Author: Friedrich JK
Year: 2005
Journal: J Biol Chem
Title: TBP-TAF complex SL1 directs RNA polymerase I pre-initiation complex formation and stabilizes upstream binding factor at the rDNA promoter.
Volume: 280
Issue: 33
Pages: 29551-8
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Protein
Q6PDZ2
Organism: Mus musculus/domesticus
Length: 836  
Fragment?: false
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Protein
Q3U0N4
Organism: Mus musculus/domesticus
Length: 836  
Fragment?: false
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Protein Coding Gene
MGP_CAROLIEiJ_G0031623 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0034187 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0034167 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0034094 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0034161 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0033872 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_109576 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0034681 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0033199 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0033845 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0034001 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0033944 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0034090 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0033991 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0034699 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0032901 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0033315 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0023221 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0032741 | -
Type: protein_coding_gene
Organism: Mus spretus
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Publication
26593443 | J:228011
 
First Author: Okuda H
Year: 2015
Journal: Nat Commun
Title: AF4 uses the SL1 components of RNAP1 machinery to initiate MLL fusion- and AEP-dependent transcription.
Volume: 6
Pages: 8869
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GXD Expression
GXD Expression
 
Probe: MGI:4844541
Assay Type: RNA in situ
Annotation Date: 2010-12-22
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1640519
Pattern: Regionally restricted
Stage: TS19
Assay Id: MGI:4848468
Age: embryonic day 11.5
Note: Staining is present in the antero-distal, posterior-distal and interdigital regions of the limb.
Specimen Label: Table S4 - E11.5
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:4844541
Assay Type: RNA in situ
Annotation Date: 2010-12-22
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:3270519
Pattern: Regionally restricted
Stage: TS19
Assay Id: MGI:4848468
Age: embryonic day 11.5
Note: Staining is present in the progress zone and middle limb.
Specimen Label: Table S4 - E11.5
Detected: true
Specimen Num: 1
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Publication
2924801 | J:35896
First Author: Almendral JM
Year: 1989
Journal: Exp Cell Res
Title: Expression, cloning and cDNA sequence of a fibroblast serum-regulated gene encoding a putative actin-associated protein (p27).
Volume: 181
Issue: 2
Pages: 518-30
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Publication
24928901 | J:216243
First Author: Murano K
Year: 2014
Journal: J Cell Sci
Title: Reconstitution of human rRNA gene transcription in mouse cells by a complete SL1 complex.
Volume: 127
Issue: Pt 15
Pages: 3309-19
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Publication
9050847 | J:39012
First Author: Heix J
Year: 1997
Journal: Proc Natl Acad Sci U S A
Title: Cloning of murine RNA polymerase I-specific TAF factors: conserved interactions between the subunits of the species-specific transcription initiation factor TIF-IB/SL1.
Volume: 94
Issue: 5
Pages: 1733-8
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Publication
28893950 | J:245730
First Author: Bardot P
Year: 2017
Journal: Development
Title: The TAF10-containing TFIID and SAGA transcriptional complexes are dispensable for early somitogenesis in the mouse embryo.
Volume: 144
Issue: 20
Pages: 3808-3818
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Publication
- | J:157064
     
First Author: University of California, Davis
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by the University of California, Davis
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Publication
20059953 | J:156017
First Author: Yokoyama S
Year: 2009
Journal: Dev Cell
Title: A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Volume: 17
Issue: 6
Pages: 836-48
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Publication
- | J:94790
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Mouse Synonym Curation
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Publication
- | J:265051
     
First Author: MGI and IMPC
Year: 2018
Journal: Database Release
Title: MGI Load of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC)
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Publication
- | J:346132
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2016
Title: Automatic assignment of GO terms using logical inference, based on on inter-ontology links
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
16602821 | J:162220
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
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Publication
- | J:78475
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
7491500 | -
First Author: Beckmann H
Year: 1995
Journal: Science
Title: Coactivator and promoter-selective properties of RNA polymerase I TAFs.
Volume: 270
Issue: 5241
Pages: 1506-9
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Protein Domain
IPR016629 | RNA_pol_I_TAF1A/TAFI48_chr
Type: Family
Description: This entry represents subunit A (TATA-binding protein-associated factor TAFI48 or TAF1A) of RNA polymerase I. It is a component of the transcription factor SL1/TIFIB complex involved in the assembly of the pre-initiation complex (PIC). The SL1/TIFIB complex is composed of TBP (TATA-binding protein) and TAF1A (TAFI48), TAF1B (TAFI63) and TAF1C (TAFI110) []. Human ribosomal RNA synthesis by RNA polymerase I requires the activator UBF and the promoter selectivity factor SL1/TIFIB. Both TAF1B/TAFI63 and TAF1C/TAFI110 contact the promoter, whereas TAF1A/TAFI48 serves as a target for interaction with UBF and is required to form a transcriptionally active SL1/TIFIB complex responsive to UBF []. Interaction of the SL1/TIFIB subunits with TBP excluded interaction with the transcription factor IID (TFIID) subunits []. This mutually exclusive binding directs the formation of promoter- and RNA polymerase-selective TBP-TAF complexes. Therefore, TAF1A/TAFI48 may function both as a target to mediate UBF activation and as a class-specific promoter selectivity factor.
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Protein
P97357
Organism: Mus musculus/domesticus
Length: 453  
Fragment?: false
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Protein
Q3V054
Organism: Mus musculus/domesticus
Length: 456  
Fragment?: true
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Protein
B9EHT7
Organism: Mus musculus/domesticus
Length: 440  
Fragment?: false
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Publication
17318177 | -
First Author: Gorski JJ
Year: 2007
Journal: EMBO J
Title: A novel TBP-associated factor of SL1 functions in RNA polymerase I transcription.
Volume: 26
Issue: 6
Pages: 1560-8
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