Type |
Details |
Score |
Gene |
Type: |
gene |
Organism: |
human |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, western clawed |
|
•
•
•
•
•
|
Gene |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chimpanzee |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
dog, domestic |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
cattle |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chicken |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
zebrafish |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Transcription factor 7 (Tcf7), also referred to by the symbol Tcf1, is a transcriptional activator involved in T-cell lymphocyte differentiation []. It is necessary for the survival of CD4+ CD8+ immature thymocytes []. Tcf7 has multiple isoforms, and there is functional differences between these isoforms [, ]. |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7494317 |
Assay Type: |
RNA in situ |
Annotation Date: |
2023-07-03 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3821426 |
Pattern: |
Not Specified |
Stage: |
TS26 |
Assay Id: |
MGI:7494350 |
Age: |
embryonic day 18.5 |
Image: |
1F Tcf7 |
Note: |
Expression higher in osteogenic front. |
Specimen Label: |
1F Tcf7 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
334
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Van de Wetering M |
Year: |
1996 |
Journal: |
Mol Cell Biol |
Title: |
Extensive alternative splicing and dual promoter usage generate Tcf-1 protein isoforms with differential transcription control properties. |
Volume: |
16 |
Issue: |
3 |
Pages: |
745-52 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ioannidis V |
Year: |
2001 |
Journal: |
Nat Immunol |
Title: |
The beta-catenin--TCF-1 pathway ensures CD4(+)CD8(+) thymocyte survival. |
Volume: |
2 |
Issue: |
8 |
Pages: |
691-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Okamura RM |
Year: |
1998 |
Journal: |
Immunity |
Title: |
Redundant regulation of T cell differentiation and TCRalpha gene expression by the transcription factors LEF-1 and TCF-1. |
Volume: |
8 |
Issue: |
1 |
Pages: |
11-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kaur KD |
Year: |
2021 |
Journal: |
Mol Metab |
Title: |
TCF7 is not essential for glucose homeostasis in mice. |
Volume: |
48 |
|
Pages: |
101213 |
|
•
•
•
•
•
|
Publication |
First Author: |
Huls G |
Year: |
2013 |
Journal: |
Leukemia |
Title: |
Loss of Tcf7 diminishes hematopoietic stem/progenitor cell function. |
Volume: |
27 |
Issue: |
7 |
Pages: |
1613-4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mayer K |
Year: |
1995 |
Journal: |
Biochim Biophys Acta |
Title: |
The human high mobility group (HMG)-box transcription factor TCF-1: novel isoforms due to alternative splicing and usage of a new exon IXA. |
Volume: |
1263 |
Issue: |
2 |
Pages: |
169-72 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
192
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
419
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
419
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
303
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Harly C |
Year: |
2020 |
Journal: |
Front Immunol |
Title: |
A Shared Regulatory Element Controls the Initiation of Tcf7 Expression During Early T Cell and Innate Lymphoid Cell Developments. |
Volume: |
11 |
|
Pages: |
470 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6184917 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689419 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:6191438 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
Table S2 - E11.5 - Tcf7 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6184917 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689421 |
Pattern: |
Not Specified |
Stage: |
TS21 |
Assay Id: |
MGI:6191438 |
Age: |
embryonic day 13.5 |
|
|
Specimen Label: |
Table S2 - E13.5 - Tcf7 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6184917 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1689424 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:6191438 |
Age: |
embryonic day 15.5 |
|
|
Specimen Label: |
Table S2 - E15.5 - Tcf7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6184917 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1689426 |
Pattern: |
Not Specified |
Stage: |
TS26 |
Assay Id: |
MGI:6191438 |
Age: |
embryonic day 18.5 |
|
|
Specimen Label: |
Table S2 - E18.5 - Tcf7 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6184917 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1689428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6191438 |
Age: |
postnatal day 4 |
|
|
Specimen Label: |
Table S2 - P4 - Tcf7 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6184917 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1689428 |
|
Stage: |
TS28 |
Assay Id: |
MGI:6191438 |
Age: |
postnatal day 14 |
|
|
Specimen Label: |
Table S2 - P14 - Tcf7 |
Detected: |
false |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6184917 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1689428 |
|
Stage: |
TS28 |
Assay Id: |
MGI:6191438 |
Age: |
postnatal day 28 |
|
|
Specimen Label: |
Table S2 - P28 - Tcf7 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Luo Y |
Year: |
2022 |
Journal: |
Front Immunol |
Title: |
EZH2 restricts Tcf7 DNA methylation and promotes TFH differentiation during acute viral infection. |
Volume: |
13 |
|
Pages: |
942465 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pais Ferreira D |
Year: |
2020 |
Journal: |
Immunity |
Title: |
Central memory CD8+ TÂ cells derive from stem-like Tcf7hi effector cells in the absence of cytotoxic differentiation. |
Volume: |
53 |
Issue: |
5 |
Pages: |
985-1000.e11 |
|
•
•
•
•
•
|
Publication |
First Author: |
Du W |
Year: |
2023 |
Journal: |
J Exp Med |
Title: |
WNT signaling in the tumor microenvironment promotes immunosuppression in murine pancreatic cancer. |
Volume: |
220 |
Issue: |
1 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Fahl SP |
Year: |
2021 |
Journal: |
Cell Rep |
Title: |
The E protein-TCF1 axis controls γδ T cell development and effector fate. |
Volume: |
34 |
Issue: |
5 |
Pages: |
108716 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu Z |
Year: |
2019 |
Journal: |
J Immunol |
Title: |
Cutting Edge: Transcription Factor BCL6 Is Required for the Generation, but Not Maintenance, of Memory CD8+ T Cells in Acute Viral Infection. |
Volume: |
203 |
Issue: |
2 |
Pages: |
323-327 |
|
•
•
•
•
•
|
Publication |
First Author: |
Barra MM |
Year: |
2015 |
Journal: |
PLoS One |
Title: |
Premature expression of Foxp3 in double-negative thymocytes. |
Volume: |
10 |
Issue: |
5 |
Pages: |
e0127038 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ladle BH |
Year: |
2016 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
De novo DNA methylation by DNA methyltransferase 3a controls early effector CD8+ T-cell fate decisions following activation. |
Volume: |
113 |
Issue: |
38 |
Pages: |
10631-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
van der Veeken J |
Year: |
2020 |
Journal: |
Immunity |
Title: |
The Transcription Factor Foxp3 Shapes Regulatory T Cell Identity by Tuning the Activity of trans-Acting Intermediaries. |
Volume: |
53 |
Issue: |
5 |
Pages: |
971-984.e5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li Q |
Year: |
2018 |
Journal: |
Mol Cell Biol |
Title: |
TCF7/TCF1 feedback controls osteocalcin signaling in brown adipocytes independent of canonical WNT/β-catenin pathway. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Liu J |
Year: |
2021 |
Journal: |
Front Immunol |
Title: |
Tcf1 Sustains the Expression of Multiple Regulators in Promoting Early Natural Killer Cell Development. |
Volume: |
12 |
|
Pages: |
791220 |
|
•
•
•
•
•
|
Publication |
First Author: |
Choi YS |
Year: |
2015 |
Journal: |
Nat Immunol |
Title: |
LEF-1 and TCF-1 orchestrate T(FH) differentiation by regulating differentiation circuits upstream of the transcriptional repressor Bcl6. |
Volume: |
16 |
Issue: |
9 |
Pages: |
980-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gautam S |
Year: |
2019 |
Journal: |
Nat Immunol |
Title: |
The transcription factor c-Myb regulates CD8+ T cell stemness and antitumor immunity. |
Volume: |
20 |
Issue: |
3 |
Pages: |
337-349 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim MV |
Year: |
2013 |
Journal: |
Immunity |
Title: |
The transcription factor Foxo1 controls central-memory CD8+ T cell responses to infection. |
Volume: |
39 |
Issue: |
2 |
Pages: |
286-97 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wu J |
Year: |
2020 |
Journal: |
Cell Rep |
Title: |
T Cell Factor 1 Suppresses CD103+ Lung Tissue-Resident Memory T Cell Development. |
Volume: |
31 |
Issue: |
1 |
Pages: |
107484 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bao K |
Year: |
2024 |
Journal: |
Nat Commun |
Title: |
TCF-1 and TOX regulate the memory formation of intestinal group 2 innate lymphoid cells in asthma. |
Volume: |
15 |
Issue: |
1 |
Pages: |
7850 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yu S |
Year: |
2012 |
Journal: |
Immunity |
Title: |
The TCF-1 and LEF-1 transcription factors have cooperative and opposing roles in T cell development and malignancy. |
Volume: |
37 |
Issue: |
5 |
Pages: |
813-26 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang Q |
Year: |
2013 |
Journal: |
Immunity |
Title: |
T cell factor 1 is required for group 2 innate lymphoid cell generation. |
Volume: |
38 |
Issue: |
4 |
Pages: |
694-704 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shan Q |
Year: |
2017 |
Journal: |
Nat Immunol |
Title: |
The transcription factor Runx3 guards cytotoxic CD8+ effector T cells against deviation towards follicular helper T cell lineage. |
Volume: |
18 |
Issue: |
8 |
Pages: |
931-939 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bélanger S |
Year: |
2023 |
Journal: |
J Immunol |
Title: |
The Chromatin Regulator Mll1 Supports T Follicular Helper Cell Differentiation by Controlling Expression of Bcl6, LEF-1, and TCF-1. |
Volume: |
210 |
Issue: |
11 |
Pages: |
1752-1760 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mammadli M |
Year: |
2023 |
Journal: |
Int J Mol Sci |
Title: |
TCF-1 Is Required for CD4 T Cell Persistence Functions during AlloImmunity. |
Volume: |
24 |
Issue: |
5 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Donnarumma T |
Year: |
2016 |
Journal: |
Cell Rep |
Title: |
Opposing Development of Cytotoxic and Follicular Helper CD4Â T Cells Controlled by the TCF-1-Bcl6 Nexus. |
Volume: |
17 |
Issue: |
6 |
Pages: |
1571-1583 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kasal DN |
Year: |
2021 |
Journal: |
J Exp Med |
Title: |
Multi-transcription factor reporter mice delineate early precursors to the ILC and LTi lineages. |
Volume: |
218 |
Issue: |
2 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Kaur K |
Year: |
2015 |
Journal: |
Diabetes |
Title: |
Elevated Hepatic miR-22-3p Expression Impairs Gluconeogenesis by Silencing the Wnt-Responsive Transcription Factor Tcf7. |
Volume: |
64 |
Issue: |
11 |
Pages: |
3659-69 |
|
•
•
•
•
•
|
Publication |
First Author: |
Barra MM |
Year: |
2015 |
Journal: |
J Immunol |
Title: |
Transcription Factor 7 Limits Regulatory T Cell Generation in the Thymus. |
Volume: |
195 |
Issue: |
7 |
Pages: |
3058-70 |
|
•
•
•
•
•
|
Publication |
First Author: |
Xu L |
Year: |
2017 |
Journal: |
Immunity |
Title: |
The Kinase mTORC1 Promotes the Generation and Suppressive Function of Follicular Regulatory T Cells. |
Volume: |
47 |
Issue: |
3 |
Pages: |
538-551.e5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Herzig Y |
Year: |
2017 |
Journal: |
Nat Immunol |
Title: |
Transcriptional programs that control expression of the autoimmune regulator gene Aire. |
Volume: |
18 |
Issue: |
2 |
Pages: |
161-172 |
|
•
•
•
•
•
|
Publication |
First Author: |
Campbell JE |
Year: |
2016 |
Journal: |
Nat Med |
Title: |
TCF1 links GIPR signaling to the control of beta cell function and survival. |
Volume: |
22 |
Issue: |
1 |
Pages: |
84-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Railo A |
Year: |
2009 |
Journal: |
Exp Cell Res |
Title: |
Genomic response to Wnt signalling is highly context-dependent--evidence from DNA microarray and chromatin immunoprecipitation screens of Wnt/TCF targets. |
Volume: |
315 |
Issue: |
16 |
Pages: |
2690-704 |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE65361 |
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus spretus |
|
•
•
•
•
•
|
Publication |
First Author: |
Oosterwegel M |
Year: |
1991 |
Journal: |
J Exp Med |
Title: |
Cloning of murine TCF-1, a T cell-specific transcription factor interacting with functional motifs in the CD3-epsilon and T cell receptor alpha enhancers. |
Volume: |
173 |
Issue: |
5 |
Pages: |
1133-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
Verbeek S |
Year: |
1995 |
Journal: |
Nature |
Title: |
An HMG-box-containing T-cell factor required for thymocyte differentiation. |
Volume: |
374 |
Issue: |
6517 |
Pages: |
70-4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Held W |
Year: |
1999 |
Journal: |
Immunity |
Title: |
Clonal acquisition of the Ly49A NK cell receptor is dependent on the trans-acting factor TCF-1. |
Volume: |
11 |
Issue: |
4 |
Pages: |
433-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tiemessen MM |
Year: |
2012 |
Journal: |
PLoS Biol |
Title: |
The nuclear effector of Wnt-signaling, Tcf1, functions as a T-cell-specific tumor suppressor for development of lymphomas. |
Volume: |
10 |
Issue: |
11 |
Pages: |
e1001430 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yu Q |
Year: |
2011 |
Journal: |
J Immunol |
Title: |
T cell factor-1 negatively regulates expression of IL-17 family of cytokines and protects mice from experimental autoimmune encephalomyelitis. |
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186 |
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PLoS One |
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Eur J Immunol |
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26 |
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J Immunol |
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Critical involvement of Tcf-1 in expansion of thymocytes. |
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Year: |
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Journal: |
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Title: |
TCF-1 mediates repression of Notch pathway in T lineage-committed early thymocytes. |
Volume: |
121 |
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First Author: |
Johnson JL |
Year: |
2018 |
Journal: |
Immunity |
Title: |
Lineage-Determining Transcription Factor TCF-1 Initiates the Epigenetic Identity of T Cells. |
Volume: |
48 |
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2 |
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Year: |
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J Immunol |
Title: |
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Year: |
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Journal: |
Proc Natl Acad Sci U S A |
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Essential role of the Wnt pathway effector Tcf-1 for the establishment of functional CD8 T cell memory. |
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Year: |
2016 |
Journal: |
Immunity |
Title: |
T Cell Factor 1-Expressing Memory-like CD8(+) T Cells Sustain the Immune Response to Chronic Viral Infections. |
Volume: |
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Publication |
First Author: |
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Year: |
2019 |
Journal: |
Immunity |
Title: |
Intratumoral Tcf1+PD-1+CD8+ T Cells with Stem-like Properties Promote Tumor Control in Response to Vaccination and Checkpoint Blockade Immunotherapy. |
Volume: |
50 |
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1 |
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Year: |
2010 |
Journal: |
Immunity |
Title: |
Differentiation and persistence of memory CD8(+) T cells depend on T cell factor 1. |
Volume: |
33 |
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Journal: |
Nature |
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Year: |
2019 |
Journal: |
Front Immunol |
Title: |
The Transcription Factor TCF1 Preserves the Effector Function of Exhausted CD8 T Cells During Chronic Viral Infection. |
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Year: |
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Journal: |
J Immunol |
Title: |
Differential Requirements for Tcf1 Long Isoforms in CD8+ and CD4+ T Cell Responses to Acute Viral Infection. |
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199 |
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Year: |
2017 |
Journal: |
J Immunol |
Title: |
Cutting Edge: β-Catenin-Interacting Tcf1 Isoforms Are Essential for Thymocyte Survival but Dispensable for Thymic Maturation Transitions. |
Volume: |
198 |
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9 |
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J Biol Chem |
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The human T cell transcription factor-1 gene. Structure, localization, and promoter characterization. |
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