|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 1 to 76 out of 76 for Tsx

0.035s

Categories

Hits by Category

Hits by Strain

Type Details Score
Protein Domain
IPR035352 | TSX
Type: Family
Description: The Tsx gene resides at the X-inactivation centre and once thought to encode a protein expressed in testis. However, this was disputed upon further analysis. ORF and immunostaining analysis concluded that Tsx may be non-coding. Tsx long transcript is abundantly expressed in meiotic germ cells, embryonic stem cells, and brain [].
•
•
•
•
•
Gene
29391 | Tsx
Type: gene
Organism: rat
•
•
•
•
•
Protein Coding Gene
MGI:108118 | Tsx
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Publication
21912526 | J:177104
First Author: Anguera MC
Year: 2011
Journal: PLoS Genet
Title: Tsx produces a long noncoding RNA and has general functions in the germline, stem cells, and brain.
Volume: 7
Issue: 9
Pages: e1002248
•
•
•
•
•
Protein
Q78Z65
Organism: Mus musculus/domesticus
Length: 144  
Fragment?: false
•
•
•
•
•
Protein
P70675
Organism: Mus musculus/domesticus
Length: 144  
Fragment?: false
•
•
•
•
•
Protein
F8SHC2
Organism: Mus musculus/domesticus
Length: 144  
Fragment?: false
•
•
•
•
•
Protein
F8SHA8
Organism: Mus musculus/domesticus
Length: 144  
Fragment?: false
•
•
•
•
•
Protein
Q9CU04
Organism: Mus musculus/domesticus
Length: 53  
Fragment?: true
•
•
•
•
•
Protein
F8SHF4
Organism: Mus musculus/domesticus
Length: 144  
Fragment?: false
•
•
•
•
•
Protein
F8SHE1
Organism: Mus musculus/domesticus
Length: 144  
Fragment?: false
•
•
•
•
•
Protein
F8SHC6
Organism: Mus musculus/domesticus
Length: 144  
Fragment?: false
•
•
•
•
•
Publication
8922998 | J:36484
First Author: Simmler MC
Year: 1996
Journal: Hum Mol Genet
Title: A 94 kb genomic sequence 3' to the murine Xist gene reveals an AT rich region containing a new testis specific gene Tsx.
Volume: 5
Issue: 11
Pages: 1713-26
•
•
•
•
•
Publication
9882475 | J:51926
First Author: Cunningham DB
Year: 1998
Journal: Dev Biol
Title: The mouse Tsx gene is expressed in Sertoli cells of the adult testis and transiently in premeiotic germ cells during puberty.
Volume: 204
Issue: 2
Pages: 345-60
•
•
•
•
•
Publication
12045143 | J:77062
First Author: Chureau C
Year: 2002
Journal: Genome Res
Title: Comparative sequence analysis of the X-inactivation center region in mouse, human, and bovine.
Volume: 12
Issue: 6
Pages: 894-908
•
•
•
•
•
Protein Coding Gene
MGP_CAROLIEiJ_G0033309 | -
Type: protein_coding_gene
Organism: Mus caroli
•
•
•
•
•
Protein Coding Gene
MGP_129S1SvImJ_G0035984 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_AJ_G0035965 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_AKRJ_G0035883 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_BALBcJ_G0035955 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_C3HHeJ_G0035661 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGI_C57BL6J_108118 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_C57BL6NJ_G0036481 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_CASTEiJ_G0034947 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_CBAJ_G0035636 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_DBA2J_G0035790 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_FVBNJ_G0035731 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_LPJ_G0035883 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_NODShiLtJ_G0035763 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_NZOHlLtJ_G0036507 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_PWKPhJ_G0034645 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_WSBEiJ_G0035087 | -
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein Coding Gene
MGP_PahariEiJ_G0031847 | -
Type: protein_coding_gene
Organism: Mus pahari
•
•
•
•
•
Protein Coding Gene
MGP_SPRETEiJ_G0034473 | -
Type: protein_coding_gene
Organism: Mus spretus
•
•
•
•
•
Publication
19114715 | J:147897
First Author: Unhavaithaya Y
Year: 2009
Journal: J Biol Chem
Title: MILI, a PIWI-interacting RNA-binding protein, is required for germ line stem cell self-renewal and appears to positively regulate translation.
Volume: 284
Issue: 10
Pages: 6507-19
•
•
•
•
•
Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
•
•
•
•
•
Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
•
•
•
•
•
Publication
12062093 | J:77015
First Author: Deng W
Year: 2002
Journal: Dev Cell
Title: miwi, a murine homolog of piwi, encodes a cytoplasmic protein essential for spermatogenesis.
Volume: 2
Issue: 6
Pages: 819-30
•
•
•
•
•
Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
•
•
•
•
•
Publication
21539824 | J:173639
First Author: Beyret E
Year: 2011
Journal: Dev Biol
Title: Pinpointing the expression of piRNAs and function of the PIWI protein subfamily during spermatogenesis in the mouse.
Volume: 355
Issue: 2
Pages: 215-26
•
•
•
•
•
Publication
15156143 | J:91129
First Author: Costoya JA
Year: 2004
Journal: Nat Genet
Title: Essential role of Plzf in maintenance of spermatogonial stem cells.
Volume: 36
Issue: 6
Pages: 653-9
•
•
•
•
•
Publication
- | J:136110
     
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
•
•
•
•
•
Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
•
•
•
•
•
Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
•
•
•
•
•
Publication
- | J:73796
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Function or Process or Component Unknown following Literature Review
•
•
•
•
•
Publication
10567576 | J:58604
First Author: Debrand E
Year: 1999
Journal: Mol Cell Biol
Title: Functional analysis of the DXPas34 locus, a 3' regulator of Xist expression.
Volume: 19
Issue: 12
Pages: 8513-25
•
•
•
•
•
Publication
14749728 | J:88278
First Author: Morey C
Year: 2004
Journal: EMBO J
Title: The region 3' to Xist mediates X chromosome counting and H3 Lys-4 dimethylation within the Xist gene.
Volume: 23
Issue: 3
Pages: 594-604
•
•
•
•
•
Publication
16648467 | J:109073
First Author: Rowntree RK
Year: 2006
Journal: Mol Cell Biol
Title: Mapping of DNA replication origins to noncoding genes of the X-inactivation center.
Volume: 26
Issue: 10
Pages: 3707-17
•
•
•
•
•
Publication
24048575 | J:356411
First Author: Bao J
Year: 2013
Journal: Biol Reprod
Title: Expression profiling reveals developmentally regulated lncRNA repertoire in the mouse male germline.
Volume: 89
Issue: 5
Pages: 107
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:5707836
Assay Type: Immunohistochemistry
Annotation Date: 2016-02-10
Strength: Present
Sex: Male
Emaps: EMAPS:2910628
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:5707858
Age: postnatal adult
Image: 3C
Specimen Label: 3C
Detected: true
Specimen Num: 1
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:5707836
Assay Type: Immunohistochemistry
Annotation Date: 2016-02-10
Strength: Present
Sex: Male
Emaps: EMAPS:2910628
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:5707858
Age: postnatal adult
Image: S2C
Specimen Label: S2C
Detected: true
Specimen Num: 2
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:5707836
Assay Type: Immunohistochemistry
Annotation Date: 2016-02-10
Strength: Present
Sex: Male
Emaps: EMAPS:2910628
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:5707858
Age: postnatal adult
Image: S2D
Specimen Label: S2D
Detected: true
Specimen Num: 3
•
•
•
•
•
GXD Expression
GXD Expression
   
Probe: MGI:5816888
Assay Type: Immunohistochemistry
Annotation Date: 2017-01-08
Strength: Present
Sex: Male
Emaps: EMAPS:2910628
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:5816886
Age: postnatal adult
Specimen Label: 3D
Detected: true
Specimen Num: 1
•
•
•
•
•
Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
•
•
•
•
•
Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
•
•
•
•
•
Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
•
•
•
•
•
Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
•
•
•
•
•
Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
•
•
•
•
•
Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
•
•
•
•
•
Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
•
•
•
•
•
Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
•
•
•
•
•
Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
•
•
•
•
•
Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
•
•
•
•
•
Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
•
•
•
•
•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
•
•
•
•
•
Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
•
•
•
•
•
Publication
2265760 | -
First Author: Bremer E
Year: 1990
Journal: Gene
Title: Analysis of the tsx gene, which encodes a nucleoside-specific channel-forming protein (Tsx) in the outer membrane of Escherichia coli.
Volume: 96
Issue: 1
Pages: 59-65
•
•
•
•
•
Protein Domain
IPR003055 | Channel_Tsx
Type: Family
Description: The tsx gene of Escherichia coli encodes an outer membrane protein, Tsx,which constitutes the receptor for colicin K and Bacteriophage T6, and functions as a substrate-specific channel for nucleosides and deoxy-nucleosides []. The protein contains 294 amino acids, the first 22 of which are characteristic of a bacterial signal sequence peptide. The putative mature form of Tsx contains 272 residues with a calculated Mr of31418. The Tsx sequence shows an even distribution of charged residuesand lacks extensive hydrophobic stretches []. Tsx shows no significant similarities to the channel-forming proteins OmpC, OmpF, PhoE and LamB from the E. coli outer membrane.
•
•
•
•
•
UniProt Feature
UniProt Feature
Begin: 1
Description: Testis-specific protein TSX
Type: chain
End: 144
•
•
•
•
•
Protein Domain
IPR036777 | Channel_Tsx-like_sf
Type: Homologous_superfamily
Description: The tsx gene of Escherichia coli encodes an outer membrane protein, Tsx, which constitutes the receptor for colicin K and Bacteriophage T6, and functions as a substrate-specific channel for nucleosides and deoxy-nucleosides []. The protein contains 294 amino acids, the first 22 of which are characteristic of a bacterial signal sequence peptide. The putative mature form of Tsx contains 272 residues with a calculated Mr of 31418. The Tsx sequence shows an even distribution of charged residues and lacks extensive hydrophobic stretches []. Tsx shows no significant similarities to the channel-forming proteins OmpC, OmpF, PhoE and LamB from the E. coli outer membrane.This entry also contains related proteins of unknown function.
•
•
•
•
•
Protein Domain
IPR018013 | Channel_Tsx-like
Type: Family
Description: The tsx gene of Escherichia coli encodes an outer membrane protein, Tsx, which constitutes the receptor for colicin K and Bacteriophage T6, and functions as a substrate-specific channel for nucleosides and deoxy-nucleosides []. The protein contains 294 amino acids, the first 22 of which are characteristic of a bacterial signal sequence peptide. The putative mature form of Tsx contains 272 residues with a calculated Mrof 31418. The Tsx sequence shows an even distribution of charged residues and lacks extensive hydrophobic stretches []. Tsx shows no significant similarities to the channel-forming proteins OmpC, OmpF, PhoE and LamB from the E. coli outer membrane.This entry also contains related proteins of unknown function.
•
•
•
•
•
Publication
20870776 | -
First Author: Barnéoud-Arnoulet A
Year: 2010
Journal: J Bacteriol
Title: Interaction of the colicin K bactericidal toxin with components of its import machinery in the periplasm of Escherichia coli.
Volume: 192
Issue: 22
Pages: 5934-42
•
•
•
•
•
Publication
7592493 | -
First Author: Pilsl H
Year: 1995
Journal: J Bacteriol
Title: Strong function-related homology between the pore-forming colicins K and 5.
Volume: 177
Issue: 23
Pages: 6973-7
•
•
•
•
•
Protein Domain
IPR035265 | Colicin-K_immunity
Type: Family
Description: Colicins are bacterial toxins produced by Escherichia coli strains and are active against E. coli or related strains. These bacterial antibiotic toxins play an important role in the E. coli colonization of environmental niches. Colicin K uses the Tsx nucleoside-specific receptor for binding at the cell surface, the OmpA protein for translocation through the outer membrane, and the TolABQR proteins for the transit through the periplasm. The N-terminal domain interacts with components of its import machinery, including the TolB and TolQ proteins []. Members of this family are colicin K immunity proteins. These proteins are able to protect a cell against colicin K [].
•
•
•
•
•
Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
•
•
•
•
•
Publication
21183079 | J:292518
First Author: Huttlin EL
Year: 2010
Journal: Cell
Title: A tissue-specific atlas of mouse protein phosphorylation and expression.
Volume: 143
Issue: 7
Pages: 1174-89
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom