Type |
Details |
Score |
Gene |
Type: |
gene |
Organism: |
Homo sapiens |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
Rattus norvegicus |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
Danio rerio |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Usherin (also known as USH2A) is a single-pass type I membrane protein that is involved in hearing and vision. Usherin interacts with collagen IV and fibronectin via its laminin EGF-like domains. Interaction with collagen may be required for stable integration into the basement membrane [, ].Defects in USH2A are the cause of Usher syndrome type 2A (USH2A). USH is a genetically heterogeneous condition characterised by the association of retinitis pigmentosa and sensorineural deafness []. Defects in USH2A are the cause of retinitis pigmentosa type 39 (RP39). RP leads to degeneration of retinal photoreceptor cells. Patients typically have night vision blindness and loss of midperipheral visual field []. |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Publication |
First Author: |
Bhattacharya G |
Year: |
2004 |
Journal: |
J Cell Sci |
Title: |
A domain-specific usherin/collagen IV interaction may be required for stable integration into the basement membrane superstructure. |
Volume: |
117 |
Issue: |
Pt 2 |
Pages: |
233-42 |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
Homo sapiens |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
Homo sapiens |
|
•
•
•
•
•
|
Publication |
First Author: |
Rivolta C |
Year: |
2000 |
Journal: |
Am J Hum Genet |
Title: |
Missense mutation in the USH2A gene: association with recessive retinitis pigmentosa without hearing loss. |
Volume: |
66 |
Issue: |
6 |
Pages: |
1975-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Perrino PA |
Year: |
2020 |
Journal: |
Commun Biol |
Title: |
Multi-level evidence of an allelic hierarchy of USH2A variants in hearing, auditory processing and speech/language outcomes. |
Volume: |
3 |
Issue: |
1 |
Pages: |
180 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lu B |
Year: |
2010 |
Journal: |
Invest Ophthalmol Vis Sci |
Title: |
Cell transplantation to arrest early changes in an ush2a animal model. |
Volume: |
51 |
Issue: |
4 |
Pages: |
2269-76 |
|
•
•
•
•
•
|
Publication |
First Author: |
van Wijk E |
Year: |
2006 |
Journal: |
Hum Mol Genet |
Title: |
The DFNB31 gene product whirlin connects to the Usher protein network in the cochlea and retina by direct association with USH2A and VLGR1. |
Volume: |
15 |
Issue: |
5 |
Pages: |
751-65 |
|
•
•
•
•
•
|
Publication |
First Author: |
Huang D |
Year: |
2002 |
Journal: |
Genomics |
Title: |
Identification of the mouse and rat orthologs of the gene mutated in Usher syndrome type IIA and the cellular source of USH2A mRNA in retina, a target tissue of the disease. |
Volume: |
80 |
Issue: |
2 |
Pages: |
195-203 |
|
•
•
•
•
•
|
Publication |
First Author: |
Eudy JD |
Year: |
1998 |
Journal: |
Science |
Title: |
Mutation of a gene encoding a protein with extracellular matrix motifs in Usher syndrome type IIa. |
Volume: |
280 |
Issue: |
5370 |
Pages: |
1753-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bhattacharya G |
Year: |
2005 |
Journal: |
Biochemistry |
Title: |
Evidence for functional importance of usherin/fibronectin interactions in retinal basement membranes. |
Volume: |
44 |
Issue: |
34 |
Pages: |
11518-24 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus |
Length: |
214
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus |
Length: |
760
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus |
Length: |
5193
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Danciger JS |
Year: |
1999 |
Journal: |
Mamm Genome |
Title: |
Genetic and physical maps of the mouse rd3 locus; exclusion of the ortholog of USH2A. |
Volume: |
10 |
Issue: |
7 |
Pages: |
657-61 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu X |
Year: |
2007 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Usherin is required for maintenance of retinal photoreceptors and normal development of cochlear hair cells. |
Volume: |
104 |
Issue: |
11 |
Pages: |
4413-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Grati M |
Year: |
2012 |
Journal: |
J Neurosci |
Title: |
Localization of PDZD7 to the stereocilia ankle-link associates this scaffolding protein with the Usher syndrome protein network. |
Volume: |
32 |
Issue: |
41 |
Pages: |
14288-93 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen Q |
Year: |
2014 |
Journal: |
J Biol Chem |
Title: |
Whirlin and PDZ domain-containing 7 (PDZD7) proteins are both required to form the quaternary protein complex associated with Usher syndrome type 2. |
Volume: |
289 |
Issue: |
52 |
Pages: |
36070-88 |
|
•
•
•
•
•
|
Publication |
First Author: |
Adato A |
Year: |
2005 |
Journal: |
Hum Mol Genet |
Title: |
Usherin, the defective protein in Usher syndrome type IIA, is likely to be a component of interstereocilia ankle links in the inner ear sensory cells. |
Volume: |
14 |
Issue: |
24 |
Pages: |
3921-32 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zou J |
Year: |
2011 |
Journal: |
Invest Ophthalmol Vis Sci |
Title: |
Whirlin replacement restores the formation of the USH2 protein complex in whirlin knockout photoreceptors. |
Volume: |
52 |
Issue: |
5 |
Pages: |
2343-51 |
|
•
•
•
•
•
|
Publication |
First Author: |
Maerker T |
Year: |
2008 |
Journal: |
Hum Mol Genet |
Title: |
A novel Usher protein network at the periciliary reloading point between molecular transport machineries in vertebrate photoreceptor cells. |
Volume: |
17 |
Issue: |
1 |
Pages: |
71-86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Roeseler DA |
Year: |
2012 |
Journal: |
PLoS One |
Title: |
Elongation factor 1 alpha1 and genes associated with Usher syndromes are downstream targets of GBX2. |
Volume: |
7 |
Issue: |
11 |
Pages: |
e47366 |
|
•
•
•
•
•
|
Publication |
First Author: |
Reiners J |
Year: |
2005 |
Journal: |
Hum Mol Genet |
Title: |
Scaffold protein harmonin (USH1C) provides molecular links between Usher syndrome type 1 and type 2. |
Volume: |
14 |
Issue: |
24 |
Pages: |
3933-43 |
|
•
•
•
•
•
|
Publication |
First Author: |
Reiners J |
Year: |
2006 |
Journal: |
Exp Eye Res |
Title: |
Molecular basis of human Usher syndrome: deciphering the meshes of the Usher protein network provides insights into the pathomechanisms of the Usher disease. |
Volume: |
83 |
Issue: |
1 |
Pages: |
97-119 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus musculus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus spretus |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6272745 |
Assay Type: |
RT-PCR |
Annotation Date: |
2019-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1716828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:6272754 |
Age: |
postnatal day 15 |
|
|
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6272745 |
Assay Type: |
RT-PCR |
Annotation Date: |
2019-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1619428 |
|
Stage: |
TS28 |
Assay Id: |
MGI:6272754 |
Age: |
postnatal day 15 |
|
|
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6272745 |
Assay Type: |
RT-PCR |
Annotation Date: |
2019-01-09 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1797228 |
|
Stage: |
TS28 |
Assay Id: |
MGI:6272754 |
Age: |
postnatal day 15 |
|
|
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425541 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1760623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4829124 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_016522_10 |
|
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425541 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1760623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4829124 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_016522_11 |
|
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425541 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1760623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4829124 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_016522_12 |
|
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425541 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1760623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4829124 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_016522_13 |
|
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425541 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1760623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4829124 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_016522_14 |
|
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425541 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1760623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4829124 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_016522_15 |
|
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425541 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1760623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4829124 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_016522_17 |
|
Detected: |
true |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425541 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1760623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4829124 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_016522_18 |
|
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6272749 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2019-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1619428 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:6272758 |
Age: |
postnatal day 5 |
|
Note: |
Expression was detected at the base of the stereocilia of vestibular hair cells. |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6272749 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2019-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1619428 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:6272758 |
Age: |
postnatal day 15 |
|
Note: |
Expression was detected at the base of the stereocilia of vestibular hair cells. |
Detected: |
true |
Specimen Num: |
9 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6272749 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2019-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1906126 |
Pattern: |
Regionally restricted |
Stage: |
TS26 |
Assay Id: |
MGI:6272758 |
Age: |
embryonic day 18.0 |
|
Note: |
Expression was detected all along the stereocilia of outer hair cells, whereas no labeling is found in the stereocilia of inner hair cells. |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6272749 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2019-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1906126 |
Pattern: |
Regionally restricted |
Stage: |
TS26 |
Assay Id: |
MGI:6272758 |
Age: |
embryonic day 20.0 |
|
Note: |
At E20, the outer hair cell labeling becomes restricted to the base of the stereocilia and also appears at the base of the inner hair cell sterocilia. |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6272749 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2019-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1906127 |
Pattern: |
Regionally restricted |
Stage: |
TS27 |
Assay Id: |
MGI:6272758 |
Age: |
postnatal day 0 |
|
Note: |
Intense labeling at the base of growing sterocilia persisted at P0. |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6272749 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2019-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1906128 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:6272758 |
Age: |
postnatal day 5 |
|
Note: |
Expression was detected at the base of the stereocilia of both outer and inner hair cells. |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6272749 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2019-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1906128 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:6272758 |
Age: |
postnatal day 5 |
|
Note: |
Expression was detected at the base of the stereocilia of inner hair cells. |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6272749 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2019-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1906128 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:6272758 |
Age: |
postnatal day 10 |
|
Note: |
Labeling of sterocilia starts to fade out first in inner hair cells at P10. |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6272749 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2019-01-09 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1906128 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:6272758 |
Age: |
postnatal day 15 |
|
Note: |
Usherin is no longer detected in the sterocilia, but a strong labeling can be seen in the apical part of the cell soma in both hair cells and supporting cells. |
Detected: |
true |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425541 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1761223 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4829124 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_016522_15 |
|
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Eudy JD |
Year: |
2000 |
Journal: |
GenBank Submission |
Title: |
Mus musculus putative extracellular matrix protein MUSH2A mRNA, complete cds |
|
|
Pages: |
AF151717 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang J |
Year: |
2010 |
Journal: |
PLoS Genet |
Title: |
Ablation of whirlin long isoform disrupts the USH2 protein complex and causes vision and hearing loss. |
Volume: |
6 |
Issue: |
5 |
Pages: |
e1000955 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zou J |
Year: |
2015 |
Journal: |
Hum Mol Genet |
Title: |
Individual USH2 proteins make distinct contributions to the ankle link complex during development of the mouse cochlear stereociliary bundle. |
Volume: |
24 |
Issue: |
24 |
Pages: |
6944-57 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zou J |
Year: |
2014 |
Journal: |
Hum Mol Genet |
Title: |
Deletion of PDZD7 disrupts the Usher syndrome type 2 protein complex in cochlear hair cells and causes hearing loss in mice. |
Volume: |
23 |
Issue: |
9 |
Pages: |
2374-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zallocchi M |
Year: |
2010 |
Journal: |
Biochemistry |
Title: |
Biochemical characterization of native Usher protein complexes from a vesicular subfraction of tracheal epithelial cells. |
Volume: |
49 |
Issue: |
6 |
Pages: |
1236-47 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cosgrove D |
Year: |
2014 |
Journal: |
Int J Biochem Cell Biol |
Title: |
Usher protein functions in hair cells and photoreceptors. |
Volume: |
46 |
|
Pages: |
80-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Michalski N |
Year: |
2007 |
Journal: |
J Neurosci |
Title: |
Molecular characterization of the ankle-link complex in cochlear hair cells and its role in the hair bundle functioning. |
Volume: |
27 |
Issue: |
24 |
Pages: |
6478-88 |
|
•
•
•
•
•
|
Publication |
First Author: |
Collin GB |
Year: |
2020 |
Journal: |
Cells |
Title: |
Mouse Models of Inherited Retinal Degeneration with Photoreceptor Cell Loss. |
Volume: |
9 |
Issue: |
4 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bailey PJ |
Year: |
2006 |
Journal: |
Exp Cell Res |
Title: |
A global genomic transcriptional code associated with CNS-expressed genes. |
Volume: |
312 |
Issue: |
16 |
Pages: |
3108-19 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2001 |
|
Title: |
RIKEN Data Curation in Mouse Genome Informatics |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2001 |
|
Title: |
Gene Ontology Annotation by the MGI Curatorial Staff |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Mouse Synonym Curation |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
Journal: |
Database Download |
Title: |
Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Wellcome Trust Sanger Institute |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
Skarnes WC |
Year: |
2011 |
Journal: |
Nature |
Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
Volume: |
474 |
Issue: |
7351 |
Pages: |
337-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
|
Title: |
Rat to Mouse ISO GO annotation transfer |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
|
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
|
Title: |
Human to Mouse ISO GO annotation transfer |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2000 |
|
Title: |
Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Gaudet P |
Year: |
2011 |
Journal: |
Brief Bioinform |
Title: |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. |
Volume: |
12 |
Issue: |
5 |
Pages: |
449-62 |
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|