Type |
Details |
Score |
Protein Domain |
Type: |
Family |
Description: |
This entry contains members of peptidase family C19 known as USP39 (MEROPS identifier C19.972; also known as U4/U6.U5 tri-snRNP-associated protein 2). The name is misleading because the active site residues are not conserved, and members of this cluster are known not to be ubiquitin hydrolases []. Homologues are found in eukaryotes [, ]. It is a component of the spliceosome where it regulates Aurora B mRNA levels, thus playing a role in cytokinesis and in the spindle checkpoint []. |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
human |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, western clawed |
|
•
•
•
•
•
|
Gene |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
dog, domestic |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chimpanzee |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
cattle |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chicken |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
zebrafish |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
van Leuken RJ |
Year: |
2008 |
Journal: |
Cell Cycle |
Title: |
Usp39 is essential for mitotic spindle checkpoint integrity and controls mRNA-levels of aurora B. |
Volume: |
7 |
Issue: |
17 |
Pages: |
2710-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lygerou Z |
Year: |
1999 |
Journal: |
Mol Cell Biol |
Title: |
A novel genetic screen for snRNP assembly factors in yeast identifies a conserved protein, Sad1p, also required for pre-mRNA splicing. |
Volume: |
19 |
Issue: |
3 |
Pages: |
2008-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hadjivassiliou H |
Year: |
2014 |
Journal: |
RNA |
Title: |
The crystal structure of S. cerevisiae Sad1, a catalytically inactive deubiquitinase that is broadly required for pre-mRNA splicing. |
Volume: |
20 |
Issue: |
5 |
Pages: |
656-69 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
564
 |
Fragment?: |
false |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1826406 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-08-25 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3270422 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:4354782 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
Table S5 - Usp39 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1826406 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-08-25 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271122 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:4354782 |
Age: |
embryonic day 14.5 |
|
Note: |
Expression is present in the upper and lower cortical plate. |
Specimen Label: |
Table S5 - Usp39 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1826406 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-08-25 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754722 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:4354782 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
Table S5 - Usp39 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zheng J |
Year: |
2023 |
Journal: |
Cell Death Dis |
Title: |
USP39 promotes hepatocellular carcinogenesis through regulating alternative splicing in cooperation with SRSF6/HNRNPC. |
Volume: |
14 |
Issue: |
10 |
Pages: |
670 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cui D |
Year: |
2023 |
Journal: |
Nat Commun |
Title: |
Spliceosome component Usp39 contributes to hepatic lipid homeostasis through the regulation of autophagy. |
Volume: |
14 |
Issue: |
1 |
Pages: |
7032 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ruan GX |
Year: |
2022 |
Journal: |
Cell Rep |
Title: |
The spliceosome component Usp39 controls B cell development by regulating immunoglobulin gene rearrangement. |
Volume: |
38 |
Issue: |
6 |
Pages: |
110338 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kimura-Yoshida C |
Year: |
2022 |
Journal: |
Commun Biol |
Title: |
USP39 is essential for mammalian epithelial morphogenesis through upregulation of planar cell polarity components. |
Volume: |
5 |
Issue: |
1 |
Pages: |
378 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus spretus |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1331893 |
Assay Type: |
RT-PCR |
Annotation Date: |
1999-03-18 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603911 |
|
Stage: |
TS11 |
Assay Id: |
MGI:1331894 |
Age: |
embryonic day 7.5 |
|
|
Specimen Label: |
1x |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1331893 |
Assay Type: |
RT-PCR |
Annotation Date: |
1999-03-18 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603911 |
|
Stage: |
TS11 |
Assay Id: |
MGI:1331894 |
Age: |
embryonic day 7.5 |
|
|
Specimen Label: |
10x |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1331893 |
Assay Type: |
RT-PCR |
Annotation Date: |
1999-03-18 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603911 |
|
Stage: |
TS11 |
Assay Id: |
MGI:1331894 |
Age: |
embryonic day 7.5 |
|
|
Specimen Label: |
100x |
Detected: |
false |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1331893 |
Assay Type: |
RT-PCR |
Annotation Date: |
1999-03-18 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1604211 |
|
Stage: |
TS11 |
Assay Id: |
MGI:1331894 |
Age: |
embryonic day 7.5 |
|
|
Specimen Label: |
1x |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1331893 |
Assay Type: |
RT-PCR |
Annotation Date: |
1999-03-18 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1604211 |
|
Stage: |
TS11 |
Assay Id: |
MGI:1331894 |
Age: |
embryonic day 7.5 |
|
|
Specimen Label: |
10x |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1331893 |
Assay Type: |
RT-PCR |
Annotation Date: |
1999-03-18 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1604211 |
|
Stage: |
TS11 |
Assay Id: |
MGI:1331894 |
Age: |
embryonic day 7.5 |
|
|
Specimen Label: |
100x |
Detected: |
false |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4947607 |
Assay Type: |
RT-PCR |
Annotation Date: |
2011-04-22 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360453 |
|
Stage: |
TS03 |
Assay Id: |
MGI:4947615 |
Age: |
embryonic day 3.0 |
|
|
Specimen Label: |
KK |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4947607 |
Assay Type: |
RT-PCR |
Annotation Date: |
2011-04-22 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360453 |
|
Stage: |
TS03 |
Assay Id: |
MGI:4947615 |
Age: |
embryonic day 3.0 |
|
|
Specimen Label: |
KB |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2914820 |
|
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8313 |
|
Specimen Label: |
GUDMAP:8313 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1737920 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8315 |
|
Specimen Label: |
GUDMAP:8315 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1797020 |
|
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8313 |
|
Specimen Label: |
GUDMAP:8313 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1737320 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8314 |
Note: |
ubiquitous signal with a range of signal strengths detected |
Specimen Label: |
GUDMAP:8314 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2893720 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8316 |
Note: |
signal appears to be absent from the rostral tip of the duct (syn: duct ostium) |
Specimen Label: |
GUDMAP:8316 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1795920 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8316 |
|
Specimen Label: |
GUDMAP:8316 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2888020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8316 |
|
Specimen Label: |
GUDMAP:8316 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-11-11 |
Strength: |
Ambiguous |
Sex: |
Male |
Emaps: |
EMAPS:2915820 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:4838230 |
Age: |
embryonic day 12.5 |
|
Note: |
It was uncertain whether expression was present in the paramesonephric duct. |
Specimen Label: |
GUDMAP:8313 |
|
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:2915820 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8313 |
|
Specimen Label: |
GUDMAP:8313 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3059316 |
Assay Type: |
RNA in situ |
Annotation Date: |
2005-12-16 |
Strength: |
Trace |
Sex: |
Not Specified |
Emaps: |
EMAPS:160415 |
Pattern: |
Not Specified |
Stage: |
TS05 |
Assay Id: |
MGI:3607337 |
Age: |
embryonic day 3.5 |
Image: |
blastocyst |
Note: |
When a less concentrated dilution of probe is used, no expression is seen. |
Specimen Label: |
blastocyst |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1736620 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8314 |
|
Specimen Label: |
GUDMAP:8314 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1736620 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8315 |
|
Specimen Label: |
GUDMAP:8315 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-11-11 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1868720 |
|
Stage: |
TS20 |
Assay Id: |
MGI:4838230 |
Age: |
embryonic day 12.5 |
|
|
Specimen Label: |
GUDMAP:8313 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1736820 |
|
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8314 |
|
Specimen Label: |
GUDMAP:8314 |
Detected: |
false |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2890920 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8316 |
|
Specimen Label: |
GUDMAP:8316 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1796820 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8313 |
|
Specimen Label: |
GUDMAP:8313 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-11-11 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:2909820 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:4838230 |
Age: |
embryonic day 12.5 |
|
|
Specimen Label: |
GUDMAP:8313 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:2909820 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8313 |
|
Specimen Label: |
GUDMAP:8313 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:2759117 |
Pattern: |
Not Specified |
Stage: |
TS17 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 10.5 |
Image: |
GUDMAP:8312 |
|
Specimen Label: |
GUDMAP:8312 |
|
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-11-11 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2913820 |
|
Stage: |
TS20 |
Assay Id: |
MGI:4838230 |
Age: |
embryonic day 12.5 |
|
Note: |
No expression is found at the gonad-mesonephros border on the mesonephric side. |
Specimen Label: |
GUDMAP:8313 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:2913820 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8313 |
|
Specimen Label: |
GUDMAP:8313 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1636717 |
Pattern: |
Regionally restricted |
Stage: |
TS17 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 10.5 |
Image: |
GUDMAP:8312 |
|
Specimen Label: |
GUDMAP:8312 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2891420 |
|
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8316 |
|
Specimen Label: |
GUDMAP:8316 |
Detected: |
false |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-11-11 |
Strength: |
Ambiguous |
Sex: |
Male |
Emaps: |
EMAPS:1797220 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:4838230 |
Age: |
embryonic day 12.5 |
|
Note: |
It was uncertain whether expression was present at the gonad-mesonephros border on the gonad side. |
Specimen Label: |
GUDMAP:8313 |
|
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1797220 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8313 |
|
Specimen Label: |
GUDMAP:8313 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:1674517 |
Pattern: |
Not Specified |
Stage: |
TS17 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 10.5 |
Image: |
GUDMAP:8312 |
Note: |
possible signal in caudal mesonephros adjacent to metanephros |
Specimen Label: |
GUDMAP:8312 |
|
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2891920 |
|
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8316 |
|
Specimen Label: |
GUDMAP:8316 |
Detected: |
false |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:2759917 |
Pattern: |
Not Specified |
Stage: |
TS17 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 10.5 |
Image: |
GUDMAP:8312 |
Note: |
signal in duct lumen only |
Specimen Label: |
GUDMAP:8312 |
|
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2914320 |
|
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8313 |
|
Specimen Label: |
GUDMAP:8313 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1737517 |
Pattern: |
Not Specified |
Stage: |
TS17 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 10.5 |
Image: |
GUDMAP:8312 |
|
Specimen Label: |
GUDMAP:8312 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Ambiguous |
Sex: |
Male |
Emaps: |
EMAPS:1797320 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8313 |
|
Specimen Label: |
GUDMAP:8313 |
|
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3059316 |
Assay Type: |
RNA in situ |
Annotation Date: |
2005-12-16 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:160465 |
|
Stage: |
TS05 |
Assay Id: |
MGI:3607337 |
Age: |
embryonic day 3.5 |
Image: |
blastocyst |
|
Specimen Label: |
blastocyst |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:3087020 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8315 |
Note: |
rostral expression; strongest signal in rostral bladder |
Specimen Label: |
GUDMAP:8315 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2892420 |
|
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8316 |
|
Specimen Label: |
GUDMAP:8316 |
Detected: |
false |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1896111 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796220 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:5538928 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:8316 |
Note: |
speckled signal pattern is indicative of mesenchymal stroma |
Specimen Label: |
GUDMAP:8316 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Makarova OV |
Year: |
2001 |
Journal: |
EMBO J |
Title: |
The 65 and 110 kDa SR-related proteins of the U4/U6.U5 tri-snRNP are essential for the assembly of mature spliceosomes. |
Volume: |
20 |
Issue: |
10 |
Pages: |
2553-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ding R |
Year: |
2024 |
Journal: |
Immunity |
Title: |
Lactate modulates RNA splicing to promote CTLA-4 expression in tumor-infiltrating regulatory TÂ cells. |
Volume: |
57 |
Issue: |
3 |
Pages: |
528-540.e6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lesh JS |
Year: |
1997 |
Journal: |
Mamm Genome |
Title: |
Mapping of the mouse corticotropin-releasing hormone receptor 2 gene (Crhr2) to chromosome 6. |
Volume: |
8 |
Issue: |
12 |
Pages: |
944-5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hao L |
Year: |
2009 |
Journal: |
Biol Reprod |
Title: |
The unfolded protein response contributes to preimplantation mouse embryo death in the DDK syndrome. |
Volume: |
80 |
Issue: |
5 |
Pages: |
944-53 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yoshikawa T |
Year: |
2006 |
Journal: |
Gene Expr Patterns |
Title: |
High-throughput screen for genes predominantly expressed in the ICM of mouse blastocysts by whole mount in situ hybridization. |
Volume: |
6 |
Issue: |
2 |
Pages: |
213-24 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ko MS |
Year: |
1998 |
Journal: |
Hum Mol Genet |
Title: |
Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. |
Volume: |
7 |
Issue: |
12 |
Pages: |
1967-78 |
|
•
•
•
•
•
|
Publication |
First Author: |
Combes AN |
Year: |
2009 |
Journal: |
Dev Dyn |
Title: |
Three-dimensional visualization of testis cord morphogenesis, a novel tubulogenic mechanism in development. |
Volume: |
238 |
Issue: |
5 |
Pages: |
1033-41 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sansom SN |
Year: |
2009 |
Journal: |
PLoS Genet |
Title: |
The level of the transcription factor Pax6 is essential for controlling the balance between neural stem cell self-renewal and neurogenesis. |
Volume: |
5 |
Issue: |
6 |
Pages: |
e1000511 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mammalian Functional Genomics Centre |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the NorCOMM project by the Mammalian Functional Genomics Centre (Mfgc), University of Manitoba |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Backcross DNA Panel Mapping Resource |
Year: |
1999 |
Journal: |
Database Release |
Title: |
JAX BSS Panel Mapping Data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information Editorial Staff Collaboration |
Year: |
2001 |
|
Title: |
LocusLink Collaboration |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Ko MS |
Year: |
2000 |
Journal: |
Development |
Title: |
Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
Volume: |
127 |
Issue: |
8 |
Pages: |
1737-49 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dickinson ME |
Year: |
2016 |
Journal: |
Nature |
Title: |
High-throughput discovery of novel developmental phenotypes. |
Volume: |
537 |
Issue: |
7621 |
Pages: |
508-514 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hansen J |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
Volume: |
100 |
Issue: |
17 |
Pages: |
9918-22 |
|
•
•
•
•
•
|
Publication |
First Author: |
Stryke D |
Year: |
2003 |
Journal: |
Nucleic Acids Res |
Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
Volume: |
31 |
Issue: |
1 |
Pages: |
278-81 |
|
•
•
•
•
•
|
Publication |
First Author: |
International Knockout Mouse Consortium |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of modified allele data from IKMC and creation of new knockout alleles |
|
|
|
|
•
•
•
•
•
|