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Search results 1 to 92 out of 92 for Utp18

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Hits by Pathway

Hits by Category

Hits by Strain

Type Details Score
Gene
51096 | UTP18
Type: gene
Organism: human
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Gene
549389 | utp18
Type: gene
Organism: frog, western clawed
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Gene
303456 | Utp18
Type: gene
Organism: rat
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Gene
491088 | UTP18
Type: gene
Organism: dog, domestic
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Gene
748116 | UTP18
Type: gene
Organism: chimpanzee
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Gene
505846 | UTP18
Type: gene
Organism: cattle
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Gene
767797 | utp18
Type: gene
Organism: zebrafish
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Gene
708052 | UTP18
Type: gene
Organism: macaque, rhesus
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Gene
417388 | UTP18
Type: gene
Organism: chicken
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Protein Coding Gene
MGI:1923402 | Utp18
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Domain
IPR045161 | Utp18
Type: Family
Description: Utp18 is a small-subunit (SSU) processome protein involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly [].
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Protein Coding Gene
MGP_CAROLIEiJ_G0016968 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_AJ_G0018912 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0018882 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0018699 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_1923402 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0018254 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0018670 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0018767 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0018848 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0019377 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0018024 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0018099 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0017814 | -
Type: protein_coding_gene
Organism: Mus spretus
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GXD Expression
GXD Expression
     
Probe: MGI:7284456
Assay Type: RT-PCR
Annotation Date: 2022-06-10
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1610524
Stage: TS24
Assay Id: MGI:7284709
Age: embryonic day 16.5
Specimen Label: WT
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:7284456
Assay Type: RT-PCR
Annotation Date: 2022-06-10
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1610524
Stage: TS24
Assay Id: MGI:7284709
Age: embryonic day 16.5
Specimen Label: DKO
Detected: true
Specimen Num: 2
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Protein Coding Gene
MGP_129S1SvImJ_G0018944 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0018885 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0019337 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0018778 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0018794 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0018303 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein
Q5SSI6
Organism: Mus musculus/domesticus
Length: 552  
Fragment?: false
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Protein
Q3U3Q3
Organism: Mus musculus/domesticus
Length: 552  
Fragment?: false
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Protein
Q3TJX6
Organism: Mus musculus/domesticus
Length: 439  
Fragment?: false
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Protein
Q8BHW1
Organism: Mus musculus/domesticus
Length: 300  
Fragment?: true
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Publication
15590835 | -
First Author: Bernstein KA
Year: 2004
Journal: Eukaryot Cell
Title: The small-subunit processome is a ribosome assembly intermediate.
Volume: 3
Issue: 6
Pages: 1619-26
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Publication
20833366 | J:164279
First Author: Trivedi CM
Year: 2010
Journal: Dev Cell
Title: Hopx and Hdac2 interact to modulate Gata4 acetylation and embryonic cardiac myocyte proliferation.
Volume: 19
Issue: 3
Pages: 450-9
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Publication
- | J:188991
     
First Author: The Jackson Laboratory
Year: 2012
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by The Jackson Laboratory
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Publication
17967808 | J:152068
First Author: Friedel RH
Year: 2007
Journal: Brief Funct Genomic Proteomic
Title: EUCOMM--the European conditional mouse mutagenesis program.
Volume: 6
Issue: 3
Pages: 180-5
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Publication
- | J:238766
     
First Author: Shanghai Model Organisms Center
Year: 2017
Journal: MGI Direct Data Submission
Title: Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China
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Publication
- | J:84900
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Journal: Database Download
Title: Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database
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Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
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Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Allele
Utp18<em1Smoc> | MGI:7293160
Name: UTP18 small subunit processome component; endonuclease-mediated mutation 1, Shanghai Model Organisms Center
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
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Strain
MGI:6476588 | C57BL/6JSmoc-Utp18<em1Smoc>/Smoc
Attribute String: coisogenic, endonuclease-mediated mutation, mutant strain
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Gene
735130 | utp18.L
Type: gene
Organism: frog, African clawed
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Allele
Utp18<+> | MGI:3527240
   
Name: UTP18 small subunit processome component; wild type
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Allele
Utp18<Gt(XE508)Byg> | MGI:4126244
 
Name: UTP18 small subunit processome component; gene trap XE508, BayGenomics
Allele Type: Gene trapped
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Allele
Utp18<Gt(OST70931)Lex> | MGI:4173466
 
Name: UTP18 small subunit processome component; gene trap OST70931, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Utp18<Gt(OST436773)Lex> | MGI:4316739
 
Name: UTP18 small subunit processome component; gene trap OST436773, Lexicon Genetics
Allele Type: Gene trapped
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Allele
Utp18<em1(IMPC)J> | MGI:7539038
Name: UTP18 small subunit processome component; endonuclease-mediated mutation 1, Jackson
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
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Allele
Utp18<Gt(DB0155)Wtsi> | MGI:3872142
 
Name: UTP18 small subunit processome component; gene trap DB0155, Wellcome Trust Sanger Institute
Allele Type: Gene trapped
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Allele
Utp18<Gt(EUCJ0023g04)Hmgu> | MGI:4869906
 
Name: UTP18 small subunit processome component; gene trap EUCJ0023g04, Helmholtz Zentrum Muenchen GmbH
Allele Type: Gene trapped
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Allele
Utp18<Gt(EUCJ0148h09)Hmgu> | MGI:4870610
 
Name: UTP18 small subunit processome component; gene trap EUCJ0148h09, Helmholtz Zentrum Muenchen GmbH
Allele Type: Gene trapped
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Strain
MGI:7539039 | C57BL/6NJ-Utp18<em1(IMPC)J>/Mmjax
Attribute String: coisogenic, endonuclease-mediated mutation, mutant strain
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Genotype
Genotype
Symbol: Utp18/Utp18
Background: C57BL/6NJ-Utp18/Mmjax
Zygosity: hm
Has Mutant Allele: true
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Protein Domain
IPR007319 | SSU_processome_Utp21
Type: Domain
Description: A large ribonuclear protein complex is requiredfor the processing of the small-ribosomal-subunit rRNA - the small-subunit (SSU) processome [, ]. This preribosomal complex contains the U3 snoRNA and at least 40 proteins, which have the following properties: They are nucleolar.They are able to coimmunoprecipitate with the U3 snoRNA and Mpp10 (a protein specific to the SSU processome). They are required for 18S rRNA biogenesis.There appears to be a linkage between polymerase I transcription and the formation of the SSU processome; as some, but not all, of the SSU processome components are required for pre-rRNA transcription initiation. These SSU processome components have been termed t-Utps. They form a pre-complex with pre-18S rRNA in the absence of snoRNA U3 and other SSU processome components. It has been proposed that the t-Utp complex proteins are both rDNA and rRNA binding proteins that are involved in the initiation of pre18S rRNA transcription. Initially binding to rDNA then associating with the 5' end of the nascent pre18S rRNA. The t-Utpcomplex forms the nucleus around which the rest of the SSU processome components, including snoRNA U3, assemble []. From electron microscopy the SSU processome may correspond to the terminal knobs visualized at the 5' ends of nascent 18S rRNA. Utp21 is a component of the SSU processome, which is required for pre-18S rRNA processing. It interacts with Utp18 [].
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Protein
Q3TAQ9
Organism: Mus musculus/domesticus
Length: 899  
Fragment?: false
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Protein
Q6NSU4
Organism: Mus musculus/domesticus
Length: 333  
Fragment?: true
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Protein
Q8VDN1
Organism: Mus musculus/domesticus
Length: 340  
Fragment?: true
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Protein
Q505Q0
Organism: Mus musculus/domesticus
Length: 899  
Fragment?: false
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Protein
Q3TA68
Organism: Mus musculus/domesticus
Length: 883  
Fragment?: false
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Publication
15489292 | -
First Author: Gallagher JE
Year: 2004
Journal: Genes Dev
Title: RNA polymerase I transcription and pre-rRNA processing are linked by specific SSU processome components.
Volume: 18
Issue: 20
Pages: 2506-17
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Publication
12068309 | -
First Author: Dragon F
Year: 2002
Journal: Nature
Title: A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis.
Volume: 417
Issue: 6892
Pages: 967-70
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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