Type |
Details |
Score |
Gene |
Type: |
gene |
Organism: |
human |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, western clawed |
|
•
•
•
•
•
|
Gene |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
dog, domestic |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chimpanzee |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
cattle |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chicken |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
zebrafish |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Ventral anterior homeobox 1 (Vax1) is a transcription factor expressed in the forebrain. It plays an important role in the brain development and the growth of retinal ganglion cells' axons [, ]. It has been linked to several developmental anomalies, such as nonsyndromic cleft lip with or without cleft palate (NSCL/P) and anophthalmia/microphthalmia (A/M) [, ]. |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim N |
Year: |
2014 |
Journal: |
Elife |
Title: |
Regulation of retinal axon growth by secreted Vax1 homeodomain protein. |
Volume: |
3 |
|
Pages: |
e02671 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bertuzzi S |
Year: |
1999 |
Journal: |
Genes Dev |
Title: |
The homeodomain protein vax1 is required for axon guidance and major tract formation in the developing forebrain. |
Volume: |
13 |
Issue: |
23 |
Pages: |
3092-105 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271120 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 12.5 |
Image: |
Vax1 - E12.5 |
Note: |
Staining is either absent or ubiquitous in the postmitotic neurons in the cortical plate of the cerebral cortex. |
Specimen Label: |
Vax1 - E12.5 |
|
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271122 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 14.5 |
Image: |
Vax1 - E14.5 |
Note: |
Staining is either absent or ubiquitous in the postmitotic neurons in the cortical plate of the cerebral cortex. |
Specimen Label: |
Vax1 - E14.5 |
|
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271124 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 16.5 |
Image: |
Vax1 - E16.5 |
Note: |
Staining is either absent or ubiquitous in the postmitotic neurons in the cortical plate of the cerebral cortex. |
Specimen Label: |
Vax1 - E16.5 |
|
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271220 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 12.5 |
Image: |
Vax1 - E12.5 |
Note: |
Staining is either absent or ubiquitous in the postmitotic neurons in the intermediate zone of the cerebral cortex. |
Specimen Label: |
Vax1 - E12.5 |
|
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271222 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 14.5 |
Image: |
Vax1 - E14.5 |
Note: |
Staining is either absent or ubiquitous in the postmitotic neurons in the intermediate zone of the cerebral cortex. |
Specimen Label: |
Vax1 - E14.5 |
|
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271224 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 16.5 |
Image: |
Vax1 - E16.5 |
Note: |
Staining is either absent or ubiquitous in the postmitotic neurons in the intermediate zone of the cerebral cortex. |
Specimen Label: |
Vax1 - E16.5 |
|
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754320 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 12.5 |
Image: |
Vax1 - E12.5 |
Note: |
Staining is either absent or ubiquitous in the ventricular zone of the dorsal thalamus and prethalamus. |
Specimen Label: |
Vax1 - E12.5 |
|
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754322 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 14.5 |
Image: |
Vax1 - E14.5 |
Note: |
Staining is either absent or ubiquitous in the ventricular zone of the dorsal thalamus and prethalamus. |
Specimen Label: |
Vax1 - E14.5 |
|
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754324 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 16.5 |
Image: |
Vax1 - E16.5 |
Note: |
Staining is either absent or ubiquitous in the ventricular zone of the dorsal thalamus and prethalamus. |
Specimen Label: |
Vax1 - E16.5 |
|
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Very strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1753720 |
Pattern: |
Non-Uniform |
Stage: |
TS20 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 12.5 |
Image: |
Vax1 - E12.5 |
Note: |
There is very strong staining in the mantle zone of the AVH and anterior ID. Staining is either absent or ubiquitous in the mantle zone of the dorsal and ventral POAs, the PVH, VMH and ARH nuclei and posterior ID. |
Specimen Label: |
Vax1 - E12.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Very strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1753722 |
Pattern: |
Non-Uniform |
Stage: |
TS22 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 14.5 |
Image: |
Vax1 - E14.5 |
Note: |
There is very strong staining in the MZ of the anterior ID, moderate staining in the AVH & moderate, scattered staining in the VMH nucleus. Staining is either absent or ubiquitous in the MZ of dorsal & ventral POAs, the PVH & ARH nuclei & posterior ID. |
Specimen Label: |
Vax1 - E14.5 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1753724 |
Pattern: |
Non-Uniform |
Stage: |
TS24 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 16.5 |
Image: |
Vax1 - E16.5 |
Note: |
There is strong staining in the MZ of the DAH and the SCH, DMH and VMH nuclei, strong, scattered staining in the AVH and weak staining in the dorsal POA. Staining is either absent or ubiquitous in the MZ of the ventral POA, PVH and ARH nuclei and the PH. |
Specimen Label: |
Vax1 - E16.5 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1691319 |
Pattern: |
Non-Uniform |
Stage: |
TS19 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 11.5 |
Image: |
Vax1 - E11.5 |
Note: |
There is strong staining in the ventricular zone of the ganglionic eminences. Staining is either absent or ubiquitous in the ventricular zone of the cerebral cortex. |
Specimen Label: |
Vax1 - E11.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271820 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 12.5 |
Image: |
Vax1 - E12.5 |
Note: |
Staining is either absent or ubiquitous in the mantle zone of the premam, mam and supramam zones and the TT. |
Specimen Label: |
Vax1 - E12.5 |
|
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271822 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 14.5 |
Image: |
Vax1 - E14.5 |
Note: |
Staining is either absent or ubiquitous in the mantle zone of the premam, mam and supramam zones and the TT. |
Specimen Label: |
Vax1 - E14.5 |
|
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271824 |
Pattern: |
Non-Uniform |
Stage: |
TS24 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 16.5 |
Image: |
Vax1 - E16.5 |
Note: |
There is weak staining in the mantle zone of the premam zone. Staining is either absent or ubiquitous in the mantle zone of the mam and supramam zones. |
Specimen Label: |
Vax1 - E16.5 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Very strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1690819 |
Pattern: |
Non-Uniform |
Stage: |
TS19 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 11.5 |
Image: |
Vax1 - E11.5 |
Note: |
Staining is very strong in the VZ of the AVH & anterior ID & weak in the dorsal & ventral POAs. Staining is either absent or ubiquitous in the VZ of the dorsal thalamus, prethalamus, PVH, VMH & ARH nuclei, posterior ID, premam, mam & supramam zones & TT. |
Specimen Label: |
Vax1 - E11.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Very strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1753920 |
Pattern: |
Non-Uniform |
Stage: |
TS20 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 12.5 |
Image: |
Vax1 - E12.5 |
Note: |
There is very strong staining in the VZ of the AVH and anterior ID, strong staining in the VMH and ARH nuclei and weak staining in the dorsal and ventral POAs. Staining is either absent or ubiquitous in the VZ of the PVH nucleus and posterior ID. |
Specimen Label: |
Vax1 - E12.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Very strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1753922 |
Pattern: |
Non-Uniform |
Stage: |
TS22 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 14.5 |
Image: |
Vax1 - E14.5 |
Note: |
There is very strong staining in the VZ of the anterior ID, strong staining in the dorsal & ventral POAs & the AVH & moderate staining in the VMH nucleus. Staining is either absent or ubiquitous in the VZ of the PVH & ARH nuclei & the posterior ID. |
Specimen Label: |
Vax1 - E14.5 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1753924 |
Pattern: |
Non-Uniform |
Stage: |
TS24 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 16.5 |
Image: |
Vax1 - E16.5 |
Note: |
There is moderate staining in the ventricular zone of the dorsal POA and the AVH and weak staining in the ventral POA. Staining is either absent or ubiquitous in the ventricular zone of the PVH, SCH, DMH, VMH and ARH nuclei, the DAH and the PH. |
Specimen Label: |
Vax1 - E16.5 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1691119 |
Pattern: |
Non-Uniform |
Stage: |
TS19 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 11.5 |
Image: |
Vax1 - E11.5 |
Note: |
There is strong staining in the mantle zone of the ganglionic eminences. Staining is either absent or ubiquitous in the postmitotic neurons in the intermediate zone and cortical plate of the cerebral cortex. |
Specimen Label: |
Vax1 - E11.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754720 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 12.5 |
Image: |
Vax1 - E12.5 |
Note: |
Staining is either absent or ubiquitous in the ventricular zone of the cerebral cortex. |
Specimen Label: |
Vax1 - E12.5 |
|
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754722 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 14.5 |
Image: |
Vax1 - E14.5 |
Note: |
Staining is either absent or ubiquitous in the ventricular zone of the cerebral cortex. |
Specimen Label: |
Vax1 - E14.5 |
|
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754724 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 16.5 |
Image: |
Vax1 - E16.5 |
Note: |
Staining is either absent or ubiquitous in the ventricular zone of the cerebral cortex. |
Specimen Label: |
Vax1 - E16.5 |
|
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 12.5 |
Image: |
Vax1 - E12.5 |
Note: |
Staining is either absent or ubiquitous in the ventricular zone of the premam, mam and supramam zones and the TT. |
Specimen Label: |
Vax1 - E12.5 |
|
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271022 |
Pattern: |
Non-Uniform |
Stage: |
TS22 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 14.5 |
Image: |
Vax1 - E14.5 |
Note: |
There is weak staining in the ventricular zone of the premam zone. Staining is either absent or ubiquitous in the ventricular zone of the mam and supramam zones and the TT. |
Specimen Label: |
Vax1 - E14.5 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271024 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 16.5 |
Image: |
Vax1 - E16.5 |
Note: |
Staining is either absent or ubiquitous in the ventricular zone of the premam, mam and supramam zones. |
Specimen Label: |
Vax1 - E16.5 |
|
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:3266520 |
Pattern: |
Non-Uniform |
Stage: |
TS20 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 12.5 |
Image: |
Vax1 - E12.5 |
Note: |
There is moderate staining in the ventricular zone of the ganglionic eminences. Staining is either absent or ubiquitous in the mantle zone of the ganglionic eminences. |
Specimen Label: |
Vax1 - E12.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:3266522 |
Pattern: |
Non-Uniform |
Stage: |
TS22 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 14.5 |
Image: |
Vax1 - E14.5 |
Note: |
There is strong staining in the ventricular zone of the ganglionic eminences and moderate staining in the mantle zone of the ganglionic eminences. |
Specimen Label: |
Vax1 - E14.5 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:3266524 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 16.5 |
Image: |
Vax1 - E16.5 |
Note: |
Staining is either absent or ubiquitous in the ventricular and mantle zones of the ganglionic eminences. |
Specimen Label: |
Vax1 - E16.5 |
|
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Very strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1690619 |
Pattern: |
Non-Uniform |
Stage: |
TS19 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 11.5 |
Image: |
Vax1 - E11.5 |
Note: |
There is very strong staining in the MZ of the AVH & anterior ID. Staining is either absent or ubiquitous in the MZ of the dorsal thalamus, prethalamus, dorsal & ventral POAs, the PVH, VMH & ARH nuclei, posterior ID, premam, mam & supramam zones & the TT. |
Specimen Label: |
Vax1 - E11.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754120 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 12.5 |
Image: |
Vax1 - E12.5 |
Note: |
Staining is either absent or ubiquitous in the mantle zone of the dorsal thalamus and prethalamus. |
Specimen Label: |
Vax1 - E12.5 |
|
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754122 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 14.5 |
Image: |
Vax1 - E14.5 |
Note: |
Staining is either absent or ubiquitous in the mantle zone of the dorsal thalamus and prethalamus. |
Specimen Label: |
Vax1 - E14.5 |
|
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1988437 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-05-13 |
Strength: |
Ambiguous |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754124 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:4450763 |
Age: |
embryonic day 16.5 |
Image: |
Vax1 - E16.5 |
Note: |
Staining is either absent or ubiquitous in the mantle zone of the dorsal thalamus and prethalamus. |
Specimen Label: |
Vax1 - E16.5 |
|
Specimen Num: |
4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Slavotinek AM |
Year: |
2012 |
Journal: |
Hum Mutat |
Title: |
VAX1 mutation associated with microphthalmia, corpus callosum agenesis, and orofacial clefting: the first description of a VAX1 phenotype in humans. |
Volume: |
33 |
Issue: |
2 |
Pages: |
364-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
de Aquino SN |
Year: |
2013 |
Journal: |
BMC Med Genet |
Title: |
Polymorphisms in FGF12, VCL, CX43 and VAX1 in Brazilian patients with nonsyndromic cleft lip with or without cleft palate. |
Volume: |
14 |
|
Pages: |
53 |
|
•
•
•
•
•
|
Publication |
First Author: |
Min KW |
Year: |
2023 |
Journal: |
Exp Mol Med |
Title: |
Visuomotor anomalies in achiasmatic mice expressing a transfer-defective Vax1 mutant. |
Volume: |
55 |
Issue: |
2 |
Pages: |
385-400 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hallonet M |
Year: |
1998 |
Journal: |
Development |
Title: |
Vax1 is a novel homeobox-containing gene expressed in the developing anterior ventral forebrain. |
Volume: |
125 |
Issue: |
14 |
Pages: |
2599-610 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wen Y |
Year: |
2021 |
Journal: |
Mol Neurobiol |
Title: |
Transcription Factor VAX1 Regulates the Regional Specification of the Subpallium Through Repressing Gsx2. |
Volume: |
58 |
Issue: |
8 |
Pages: |
3729-3744 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bharti K |
Year: |
2011 |
Journal: |
Development |
Title: |
Lack of the ventral anterior homeodomain transcription factor VAX1 leads to induction of a second pituitary. |
Volume: |
138 |
Issue: |
5 |
Pages: |
873-8 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
338
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Pandolfi EC |
Year: |
2020 |
Journal: |
Mol Neurobiol |
Title: |
The Homeodomain Transcription Factors Vax1 and Six6 Are Required for SCN Development and Function. |
Volume: |
57 |
Issue: |
2 |
Pages: |
1217-1232 |
|
•
•
•
•
•
|
Publication |
First Author: |
Geoghegan F |
Year: |
2017 |
Journal: |
J Dent Res |
Title: |
Vax1 Plays an Indirect Role in the Etiology of Murine Cleft Palate. |
Volume: |
96 |
Issue: |
13 |
Pages: |
1555-1562 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hoffmann HM |
Year: |
2021 |
Journal: |
J Neurosci Res |
Title: |
The transcription factors SIX3 and VAX1 are required for suprachiasmatic nucleus circadian output and fertility in female mice. |
Volume: |
99 |
Issue: |
10 |
Pages: |
2625-2645 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hoffmann HM |
Year: |
2016 |
Journal: |
J Neurosci |
Title: |
Deletion of Vax1 from Gonadotropin-Releasing Hormone (GnRH) Neurons Abolishes GnRH Expression and Leads to Hypogonadism and Infertility. |
Volume: |
36 |
Issue: |
12 |
Pages: |
3506-18 |
|
•
•
•
•
•
|
Publication |
First Author: |
Soria JM |
Year: |
2004 |
Journal: |
J Neurosci |
Title: |
Defective postnatal neurogenesis and disorganization of the rostral migratory stream in absence of the Vax1 homeobox gene. |
Volume: |
24 |
Issue: |
49 |
Pages: |
11171-81 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hoffmann HM |
Year: |
2016 |
Journal: |
Neurosci Commun (Houst) |
Title: |
A small population of hypothalamic neurons govern fertility: the critical role of VAX1 in GnRH neuron development and fertility maintenance. |
Volume: |
2 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Van Loh BM |
Year: |
2023 |
Journal: |
Front Endocrinol (Lausanne) |
Title: |
The transcription factor VAX1 in VIP neurons of the suprachiasmatic nucleus impacts circadian rhythm generation, depressive-like behavior, and the reproductive axis in a sex-specific manner in mice. |
Volume: |
14 |
|
Pages: |
1269672 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6186512 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689419 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:6191544 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
Table S2 - E11.5 - Vax1 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6186512 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689421 |
Pattern: |
Not Specified |
Stage: |
TS21 |
Assay Id: |
MGI:6191544 |
Age: |
embryonic day 13.5 |
|
|
Specimen Label: |
Table S2 - E13.5 - Vax1 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6186512 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1689424 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:6191544 |
Age: |
embryonic day 15.5 |
|
|
Specimen Label: |
Table S2 - E15.5 - Vax1 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6186512 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1689426 |
Pattern: |
Not Specified |
Stage: |
TS26 |
Assay Id: |
MGI:6191544 |
Age: |
embryonic day 18.5 |
|
|
Specimen Label: |
Table S2 - E18.5 - Vax1 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6186512 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1689428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6191544 |
Age: |
postnatal day 4 |
|
|
Specimen Label: |
Table S2 - P4 - Vax1 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6186512 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1689428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6191544 |
Age: |
postnatal day 14 |
|
|
Specimen Label: |
Table S2 - P14 - Vax1 |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6186512 |
Assay Type: |
RNA in situ |
Annotation Date: |
2018-07-25 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1689428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6191544 |
Age: |
postnatal day 28 |
|
|
Specimen Label: |
Table S2 - P28 - Vax1 |
Detected: |
true |
Specimen Num: |
7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Coré N |
Year: |
2020 |
Journal: |
Elife |
Title: |
Stem cell regionalization during olfactory bulb neurogenesis depends on regulatory interactions between Vax1 and Pax6. |
Volume: |
9 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Lavalle SN |
Year: |
2021 |
Journal: |
Mol Cell Endocrinol |
Title: |
Kiss1 is differentially regulated in male and female mice by the homeodomain transcription factor VAX1. |
Volume: |
534 |
|
Pages: |
111358 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hoffmann HM |
Year: |
2014 |
Journal: |
Endocrinology |
Title: |
Heterozygous deletion of ventral anterior homeobox (vax1) causes subfertility in mice. |
Volume: |
155 |
Issue: |
10 |
Pages: |
4043-53 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ohsaki K |
Year: |
1999 |
Journal: |
Genes Cells |
Title: |
Expression of the Vax family homeobox genes suggests multiple roles in eye development. |
Volume: |
4 |
Issue: |
5 |
Pages: |
267-76 |
|
•
•
•
•
•
|
Publication |
First Author: |
Newman EA |
Year: |
2018 |
Journal: |
Dev Biol |
Title: |
Foxd1 is required for terminal differentiation of anterior hypothalamic neuronal subtypes. |
Volume: |
439 |
Issue: |
2 |
Pages: |
102-111 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hallonet M |
Year: |
1999 |
Journal: |
Genes Dev |
Title: |
Vax1, a novel homeobox-containing gene, directs development of the basal forebrain and visual system. |
Volume: |
13 |
Issue: |
23 |
Pages: |
3106-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
Taglialatela P |
Year: |
2004 |
Journal: |
Development |
Title: |
Compromised generation of GABAergic interneurons in the brains of Vax1-/- mice. |
Volume: |
131 |
Issue: |
17 |
Pages: |
4239-49 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus spretus |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1289531 |
Assay Type: |
RNA in situ |
Annotation Date: |
1998-10-30 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1667816 |
Pattern: |
Regionally restricted |
Stage: |
TS16 |
Assay Id: |
MGI:1303377 |
Age: |
embryonic day 11.0 |
Image: |
4D |
Note: |
Expression is present in the caudal and rostral part of the optic stalk. |
Specimen Label: |
4D |
Detected: |
true |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1289531 |
Assay Type: |
RNA in situ |
Annotation Date: |
2002-04-04 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1667820 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:2177156 |
Age: |
embryonic day 12.5 |
|
Note: |
Expression is detected in the optic cup and optic stalk. |
Specimen Label: |
not shown |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1289531 |
Assay Type: |
RNA in situ |
Annotation Date: |
2002-04-04 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1667820 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:2177156 |
Age: |
embryonic day 12.5 |
|
Note: |
Expression is detected in the optic cup and optic stalk. Expression is the same as in wild type. |
Specimen Label: |
not shown |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1289531 |
Assay Type: |
RNA in situ |
Annotation Date: |
1998-10-30 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1667815 |
Pattern: |
Regionally restricted |
Stage: |
TS15 |
Assay Id: |
MGI:1303377 |
Age: |
embryonic day 9.5 |
Image: |
4B |
Note: |
Expression is restricted to the rostral & ventral part of the optic stalk. |
Specimen Label: |
4B |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1289531 |
Assay Type: |
RNA in situ |
Annotation Date: |
1998-10-30 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1667817 |
Pattern: |
Not Specified |
Stage: |
TS17 |
Assay Id: |
MGI:1303377 |
Age: |
embryonic day 11.0 |
Image: |
4C |
|
Specimen Label: |
4C |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7335209 |
Assay Type: |
RNA in situ |
Annotation Date: |
2022-09-12 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1667815 |
Pattern: |
Regionally restricted |
Stage: |
TS15 |
Assay Id: |
MGI:7335211 |
Age: |
embryonic day 9.5 |
|
Note: |
Expression occurs as an extension of expression in forebrain through the optic stalk |
Specimen Label: |
5A |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|