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Search results 1 to 97 out of 97 for Vta1

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Categories

Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
Gene
51534 | VTA1
Type: gene
Organism: human
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Gene
506430 | VTA1
Type: gene
Organism: cattle
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Gene
421674 | VTA1
Type: gene
Organism: chicken
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Gene
406414 | vta1
Type: gene
Organism: zebrafish
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Gene
701578 | VTA1
Type: gene
Organism: macaque, rhesus
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Gene
493470 | vta1
Type: gene
Organism: frog, western clawed
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Gene
292640 | Vta1
Type: gene
Organism: rat
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Gene
612830 | VTA1
Type: gene
Organism: dog, domestic
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Gene
463033 | VTA1
Type: gene
Organism: chimpanzee
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Protein Coding Gene
MGI:1913451 | Vta1
Type: protein_coding_gene
Organism: mouse, laboratory
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Publication
15173323 | J:90848
First Author: Fujita H
Year: 2004
Journal: J Cell Sci
Title: Mammalian class E Vps proteins, SBP1 and mVps2/CHMP2A, interact with and regulate the function of an AAA-ATPase SKD1/Vps4B.
Volume: 117
Issue: Pt 14
Pages: 2997-3009
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Protein Coding Gene
MGP_CAROLIEiJ_G0015131 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0017028 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0017006 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0016970 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0016964 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0016789 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_1913451 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0017426 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0016371 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0016761 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0016869 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0016864 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0016944 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0016894 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0017464 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0016156 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0016433 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0023750 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0015939 | -
Type: protein_coding_gene
Organism: Mus spretus
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GXD Expression
GXD Expression
   
Probe: MGI:7528945
Assay Type: Western blot
Annotation Date: 2023-09-21
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1611817
Stage: TS17
Assay Id: MGI:7529451
Age: embryonic day 10.5
Image: 7
Specimen Label: E10.5 BA1
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
   
Probe: MGI:7528945
Assay Type: Western blot
Annotation Date: 2023-09-21
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1668117
Stage: TS17
Assay Id: MGI:7529451
Age: embryonic day 10.5
Image: 7
Specimen Label: E10.5 FNP
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
   
Probe: MGI:7528945
Assay Type: Western blot
Annotation Date: 2023-09-21
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1610517
Stage: TS17
Assay Id: MGI:7529451
Age: embryonic day 10.5
Image: 7
Specimen Label: E10.5 Heart
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
   
Probe: MGI:7528945
Assay Type: Western blot
Annotation Date: 2023-09-21
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1640517
Stage: TS17
Assay Id: MGI:7529451
Age: embryonic day 10.5
Image: 7
Specimen Label: E10.5 Limbs
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
   
Probe: MGI:7528945
Assay Type: Western blot
Annotation Date: 2023-09-21
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1611819
Stage: TS19
Assay Id: MGI:7529451
Age: embryonic day 11.5
Image: 7
Specimen Label: E11.5 BA1
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
   
Probe: MGI:7528945
Assay Type: Western blot
Annotation Date: 2023-09-21
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1668119
Stage: TS19
Assay Id: MGI:7529451
Age: embryonic day 11.5
Image: 7
Specimen Label: E11.5 FNP
Detected: true
Specimen Num: 6
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GXD Expression
GXD Expression
   
Probe: MGI:7528945
Assay Type: Western blot
Annotation Date: 2023-09-21
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1610519
Stage: TS19
Assay Id: MGI:7529451
Age: embryonic day 11.5
Image: 7
Specimen Label: E11.5 Heart
Detected: true
Specimen Num: 7
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GXD Expression
GXD Expression
   
Probe: MGI:7528945
Assay Type: Western blot
Annotation Date: 2023-09-21
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1640519
Stage: TS19
Assay Id: MGI:7529451
Age: embryonic day 11.5
Image: 7
Specimen Label: E11.5 Limbs
Detected: true
Specimen Num: 8
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GXD Expression
GXD Expression
     
Probe: MGI:1526582
Assay Type: RNA in situ
Annotation Date: 2009-08-25
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:3270422
Stage: TS22
Assay Id: MGI:4354954
Age: embryonic day 14.5
Specimen Label: Table S5 - 1110059P08Rik
Detected: false
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:1526582
Assay Type: RNA in situ
Annotation Date: 2009-08-25
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3271122
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:4354954
Age: embryonic day 14.5
Note: Expression is present in the upper, but not the lower, cortical plate.
Specimen Label: Table S5 - 1110059P08Rik
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
     
Probe: MGI:1526582
Assay Type: RNA in situ
Annotation Date: 2009-08-25
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1754722
Stage: TS22
Assay Id: MGI:4354954
Age: embryonic day 14.5
Specimen Label: Table S5 - 1110059P08Rik
Detected: false
Specimen Num: 1
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Publication
19357255 | J:164625
First Author: van Balkom BW
Year: 2009
Journal: J Am Soc Nephrol
Title: LIP5 interacts with aquaporin 2 and facilitates its lysosomal degradation.
Volume: 20
Issue: 5
Pages: 990-1001
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Publication
37573008 | J:339600
 
First Author: Hermosilla Aguayo V
Year: 2023
Journal: Dev Biol
Title: ESCRT-dependent control of craniofacial morphogenesis with concomitant perturbation of NOTCH signaling.
Volume: 503
Pages: 25-42
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Publication
19521500 | J:149737
First Author: Sansom SN
Year: 2009
Journal: PLoS Genet
Title: The level of the transcription factor Pax6 is essential for controlling the balance between neural stem cell self-renewal and neurogenesis.
Volume: 5
Issue: 6
Pages: e1000511
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
10725249 | J:60984
First Author: Ko MS
Year: 2000
Journal: Development
Title: Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development.
Volume: 127
Issue: 8
Pages: 1737-49
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Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
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Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:60000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Gene
104973756 | LOC104973756
Type: gene
Organism: cattle
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Protein
Q3V4B3
Organism: Mus musculus/domesticus
Length: 303  
Fragment?: false
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Protein
F6W5Q8
Organism: Mus musculus/domesticus
Length: 251  
Fragment?: true
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Protein
Q9CR26
Organism: Mus musculus/domesticus
Length: 309  
Fragment?: false
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Protein
F8WJC2
Organism: Mus musculus/domesticus
Length: 38  
Fragment?: false
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UniProt Feature
UniProt Feature
Begin: 2
Description: Vacuolar protein sorting-associated protein VTA1 homolog
Type: chain
End: 309
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Publication
18194651 | -
First Author: Xiao J
Year: 2008
Journal: Dev Cell
Title: Structural basis of Vta1 function in the multivesicular body sorting pathway.
Volume: 14
Issue: 1
Pages: 37-49
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Protein
F6RYM7
Organism: Mus musculus/domesticus
Length: 70  
Fragment?: true
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Publication
16505166 | J:320797
First Author: Azmi I
Year: 2006
Journal: J Cell Biol
Title: Recycling of ESCRTs by the AAA-ATPase Vps4 is regulated by a conserved VSL region in Vta1.
Volume: 172
Issue: 5
Pages: 705-17
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Publication
12953057 | -
First Author: Yeo SC
Year: 2003
Journal: J Cell Sci
Title: Vps20p and Vta1p interact with Vps4p and function in multivesicular body sorting and endosomal transport in Saccharomyces cerevisiae.
Volume: 116
Issue: Pt 19
Pages: 3957-70
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Publication
25010425 | -
First Author: Wang F
Year: 2014
Journal: PLoS Pathog
Title: Arabidopsis LIP5, a positive regulator of multivesicular body biogenesis, is a critical target of pathogen-responsive MAPK cascade in plant basal defense.
Volume: 10
Issue: 7
Pages: e1004243
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Publication
26229051 | -
First Author: Wang F
Year: 2015
Journal: Plant Physiol
Title: A Critical Role of Lyst-Interacting Protein5, a Positive Regulator of Multivesicular Body Biogenesis, in Plant Responses to Heat and Salt Stresses.
Volume: 169
Issue: 1
Pages: 497-511
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Publication
15644320 | -
First Author: Ward DM
Year: 2005
Journal: J Biol Chem
Title: The role of LIP5 and CHMP5 in multivesicular body formation and HIV-1 budding in mammalian cells.
Volume: 280
Issue: 11
Pages: 10548-55
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Protein Domain
IPR044538 | Vta1-like
Type: Family
Description: This entry represents yeast Vta1 and its homologues from animals and plants. Vta1 interacts with the AAA ATPase Vps4 and is required for multivesicular body (MVB) sorting [, ]. This entry also includes LIP5 from Arabidopsis. LIP5 is a positive regulator of the Suppressor of K(+) Transport Growth Defect1 (SKD1) AAA ATPase in MVB biogenesis. It is also a target of pathogen-responsive mitogen-activated protein kinases (MPKs) and plays a critical role in plant basal resistance [, ]. Mammalian Vta1 homologue functions in MVB sorting and is required for HIV release [].
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Publication
14701806 | -
First Author: Shiflett SL
Year: 2004
Journal: J Biol Chem
Title: Characterization of Vta1p, a class E Vps protein in Saccharomyces cerevisiae.
Volume: 279
Issue: 12
Pages: 10982-90
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Protein Domain
IPR039431 | Vta1/CALS_N
Type: Domain
Description: This domain can be found in the N terminus of the Vta1 protein, which is a class E vacuolar protein sorting (VPS) protein required for the formation of the multivesicular body (MVB) []. Proteins containing this domain also include Vta1 homologues, such as SBP1 from humans and LIP5 from Arabidopsis thaliana []. This domain can also be found in plant callose synthase, which is involved in callose synthesis at the forming cell plate during cytokinesis [].
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Protein Domain
IPR023175 | Vta1/CALS_N_sf
Type: Homologous_superfamily
Description: This superfamily represents the N-terminal domain of vacuolar protein sorting-associated proteins and callose synthases. This domain contains seven alpha helices arranged into two antiparallel three-helix bundle modules. It has been proposed that vacuolar protein sorting-associated protein Vta1 interacts with Vps60 and Vps46/Did2 via this N-terminal domain [].
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Protein Domain
IPR041212 | Vta1_C
Type: Domain
Description: This is the C-terminal domain of the Vta1, which is a multivesicular body (MVB) protein. This domain promotes the ATP-dependent double ring assembly of Vps4. Furthermore, it has been shown that it is necessary and sufficient for protein dimerization. Mutations in Lys-299 and Lys-302 completely abolished the ability of Vta1 to stimulate the ATPase activity of Vps4 while mutation in Lys-322 had no effect [].
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Publication
11283334 | -
First Author: Hong Z
Year: 2001
Journal: Plant Cell
Title: A cell plate-specific callose synthase and its interaction with phragmoplastin.
Volume: 13
Issue: 4
Pages: 755-68
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Publication
11042159 | J:68323
First Author: Carninci P
Year: 2000
Journal: Genome Res
Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.
Volume: 10
Issue: 10
Pages: 1617-30
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Publication
10349636 | J:80645
 
First Author: Carninci P
Year: 1999
Journal: Methods Enzymol
Title: High-efficiency full-length cDNA cloning.
Volume: 303
Pages: 19-44
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Publication
11076861 | J:68324
First Author: Shibata K
Year: 2000
Journal: Genome Res
Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.
Volume: 10
Issue: 11
Pages: 1757-71
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Publication
16141073 | -
First Author: Katayama S
Year: 2005
Journal: Science
Title: Antisense transcription in the mammalian transcriptome.
Volume: 309
Issue: 5740
Pages: 1564-6
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
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Publication
21183079 | J:292518
First Author: Huttlin EL
Year: 2010
Journal: Cell
Title: A tissue-specific atlas of mouse protein phosphorylation and expression.
Volume: 143
Issue: 7
Pages: 1174-89
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Publication
19468303 | -
First Author: Church DM
Year: 2009
Journal: PLoS Biol
Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.
Volume: 7
Issue: 5
Pages: e1000112
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