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Search results 1 to 100 out of 101 for Wdr82

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Hits by Pathway

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Hits by Strain

Type Details Score
Gene
80335 | WDR82
Type: gene
Organism: human
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Gene
448141 | wdr82
Type: gene
Organism: frog, western clawed
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Gene
460419 | WDR82
Type: gene
Organism: chimpanzee
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Gene
686295 | Wdr82
Type: gene
Organism: rat
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Gene
484740 | WDR82
Type: gene
Organism: dog, domestic
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Gene
783336 | WDR82
Type: gene
Organism: cattle
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Gene
415942 | WDR82
Type: gene
Organism: chicken
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Gene
321614 | wdr82
Type: gene
Organism: zebrafish
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Gene
697708 | WDR82
Type: gene
Organism: macaque, rhesus
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Protein Coding Gene
MGI:1924555 | Wdr82
Type: protein_coding_gene
Organism: mouse, laboratory
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Publication
21123813 | J:170241
First Author: Bi Y
Year: 2011
Journal: Biol Reprod
Title: WDR82, a key epigenetics-related factor, plays a crucial role in normal early embryonic development in mice.
Volume: 84
Issue: 4
Pages: 756-64
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Protein Coding Gene
MGP_CAROLIEiJ_G0032612 | -
Type: protein_coding_gene
Organism: Mus caroli
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Protein Coding Gene
MGP_129S1SvImJ_G0035221 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AJ_G0035201 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_AKRJ_G0035133 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_BALBcJ_G0035194 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C3HHeJ_G0034904 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI_C57BL6J_1924555 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_C57BL6NJ_G0035714 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CASTEiJ_G0034216 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_CBAJ_G0034873 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_DBA2J_G0035034 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_FVBNJ_G0034982 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_LPJ_G0035110 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NODShiLtJ_G0035021 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_NZOHlLtJ_G0035736 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PWKPhJ_G0033923 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_WSBEiJ_G0034336 | -
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGP_PahariEiJ_G0015480 | -
Type: protein_coding_gene
Organism: Mus pahari
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Protein Coding Gene
MGP_SPRETEiJ_G0033758 | -
Type: protein_coding_gene
Organism: Mus spretus
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Publication
35315911 | J:340249
 
First Author: Yang S
Year: 2022
Journal: J Exp Med
Title: WDR82-binding long noncoding RNA lncEry controls mouse erythroid differentiation and maturation.
Volume: 219
Issue: 4
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GXD Expression
GXD Expression
     
Probe: MGI:4947234
Assay Type: Western blot
Annotation Date: 2011-04-20
Strength: Present
Sex: Female
Emaps: EMAPS:1796228
Stage: TS28
Assay Id: MGI:4947252
Age: postnatal
Specimen Label: Lane 1
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
     
Probe: MGI:4947234
Assay Type: Western blot
Annotation Date: 2011-04-20
Strength: Present
Sex: Not Specified
Emaps: EMAPS:360411
Stage: TS01
Assay Id: MGI:4947252
Age: embryonic day 0.5
Specimen Label: Zygote
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
     
Probe: MGI:4947234
Assay Type: Western blot
Annotation Date: 2011-04-20
Strength: Present
Sex: Female
Emaps: EMAPS:3575528
Stage: TS28
Assay Id: MGI:4947252
Age: postnatal
Specimen Label: MII
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
 
Probe: MGI:4947234
Assay Type: Immunohistochemistry
Annotation Date: 2011-04-20
Strength: Present
Sex: Not Specified
Emaps: EMAPS:318643
Pattern: Regionally restricted
Stage: TS03
Assay Id: MGI:4947238
Age: embryonic day 2.0
Note: Intense fluorescence is observed in the nuclei.
Specimen Label: 1B 4-cell embryo
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
 
Probe: MGI:4947234
Assay Type: Immunohistochemistry
Annotation Date: 2011-04-20
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160331
Pattern: Regionally restricted
Stage: TS01
Assay Id: MGI:4947238
Age: embryonic day 0.5
Note: Intense fluorescence is observed in the nucleus.
Specimen Label: 1B 1-cell zygote
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Probe: MGI:4947234
Assay Type: Immunohistochemistry
Annotation Date: 2011-04-20
Strength: Present
Sex: Not Specified
Emaps: EMAPS:360354
Pattern: Regionally restricted
Stage: TS04
Assay Id: MGI:4947238
Age: embryonic day 3.5
Note: Intense fluorescence is observed in the nuclei.
Specimen Label: 1B blastocyte embryo
Detected: true
Specimen Num: 6
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GXD Expression
GXD Expression
 
Probe: MGI:4947234
Assay Type: Immunohistochemistry
Annotation Date: 2011-04-20
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160404
Pattern: Regionally restricted
Stage: TS04
Assay Id: MGI:4947238
Age: embryonic day 3.0
Note: Intense fluorescence is observed in the nuclei.
Specimen Label: 1B morula embryo
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
 
Probe: MGI:4947234
Assay Type: Immunohistochemistry
Annotation Date: 2011-04-20
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3575528
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:4947238
Age: postnatal
Note: Intense fluorescence is observed in the cytoplasm.
Specimen Label: 1B MII oocyte
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Probe: MGI:4947234
Assay Type: Immunohistochemistry
Annotation Date: 2011-04-20
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160362
Pattern: Regionally restricted
Stage: TS02
Assay Id: MGI:4947238
Age: embryonic day 1.0
Note: Intense fluorescence is observed in the nuclei.
Specimen Label: 1B 2-cell embryo
Detected: true
Specimen Num: 3
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Publication
33767452 | J:319942
First Author: Austenaa LMI
Year: 2021
Journal: Nat Struct Mol Biol
Title: A first exon termination checkpoint preferentially suppresses extragenic transcription.
Volume: 28
Issue: 4
Pages: 337-346
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Publication
22252316 | J:183708
First Author: Vethantham V
Year: 2012
Journal: Mol Cell Biol
Title: Dynamic loss of H2B ubiquitylation without corresponding changes in H3K4 trimethylation during myogenic differentiation.
Volume: 32
Issue: 6
Pages: 1044-55
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Publication
30995416 | J:291201
First Author: Cao Y
Year: 2019
Journal: FASEB J
Title: Deletion of maternal UHRF1 severely reduces mouse oocyte quality and causes developmental defects in preimplantation embryos.
Volume: 33
Issue: 7
Pages: 8294-8305
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Publication
- | J:237616
     
First Author: MGI and IMPC
Year: 2017
Journal: MGI Direct Data Submission
Title: MGI Curation of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC)
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Publication
- | J:84900
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Journal: Database Download
Title: Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database
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Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
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Publication
- | J:148605
     
First Author: Wellcome Trust Sanger Institute
Year: 2009
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:78475
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
17998332 | -
First Author: Lee JH
Year: 2008
Journal: Mol Cell Biol
Title: Wdr82 is a C-terminal domain-binding protein that recruits the Setd1A Histone H3-Lys4 methyltransferase complex to transcription start sites of transcribed human genes.
Volume: 28
Issue: 2
Pages: 609-18
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Publication
26577379 | -
First Author: Brewer-Jensen P
Year: 2016
Journal: RNA
Title: Suppressor of sable [Su(s)] and Wdr82 down-regulate RNA from heat-shock-inducible repetitive elements by a mechanism that involves transcription termination.
Volume: 22
Issue: 1
Pages: 139-54
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Publication
29269482 | J:260454
First Author: Franks TM
Year: 2017
Journal: Genes Dev
Title: Nup98 recruits the Wdr82-Set1A/COMPASS complex to promoters to regulate H3K4 trimethylation in hematopoietic progenitor cells.
Volume: 31
Issue: 22
Pages: 2222-2234
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Publication
15024081 | -
First Author: Cheng H
Year: 2004
Journal: Mol Cell Biol
Title: The essential WD repeat protein Swd2 has dual functions in RNA polymerase II transcription termination and lysine 4 methylation of histone H3.
Volume: 24
Issue: 7
Pages: 2932-43
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Publication
22431730 | -
First Author: Soares LM
Year: 2012
Journal: J Biol Chem
Title: Yeast Swd2 is essential because of antagonism between Set1 histone methyltransferase complex and APT (associated with Pta1) termination factor.
Volume: 287
Issue: 19
Pages: 15219-31
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Protein Domain
IPR037867 | Swd2/WDR82
Type: Family
Description: This entry includes Swd2 from yeasts and WDR82 from animals. They are part of the Set1/COMPASS complex [].Besides being part of the Set1/COMPASS complex, Swd2 is also a component of the cleavage and polyadenylation factor (CPF) complex and its subcomplex APT [, , ].The COMPASS (Complex Proteins Associated with Set1 or Set1C) is the yeast homologue ofthe human MLL complex, which is required for mono-, di-, and trimethylation of lysine 4 of histone H3 []. It is required in telomeric transcriptional silencing []. The complex consists of Set1, Bre2, Spp1, Sdc1, Shg1, Swd1, Swd2, and Swd3 [, ].
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Publication
20516061 | J:168381
First Author: Lee JH
Year: 2010
Journal: J Biol Chem
Title: Identification and characterization of a novel human PP1 phosphatase complex.
Volume: 285
Issue: 32
Pages: 24466-76
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Publication
25561738 | -
First Author: Shinsky SA
Year: 2015
Journal: J Biol Chem
Title: Biochemical reconstitution and phylogenetic comparison of human SET1 family core complexes involved in histone methylation.
Volume: 290
Issue: 10
Pages: 6361-75
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Protein Domain
IPR034467 | Set1A_RRM
Type: Domain
Description: This entry represents the RNA recognition motif (RRM) of Setd1A (also known as Set1A), a ubiquitously expressed vertebrates histone methyltransferase that exhibits high homology to yeast Set1. Set1A is localized to euchromatic nuclear speckles and associates with a complex containing six human homologs of the yeast Set1/COMPASS complex, including CXXC finger protein 1 (CFP1; homologous to yeast Spp1), Rbbp5 (homologous to yeast Swd1), Ash2 (homologous to yeast Bre2), Wdr5 (homologous to yeast Swd3), and Wdr82 (homologous to yeast Swd2) []. Set1A contains an N-terminal RNA recognition motif (RRM), an N-SET domain, and a C-terminal catalytic SET domain followed by a post-SET domain. In contrast to Set1B, Set1A additionally contains an HCF-1 binding motif that interacts with HCF-1 in vivo.
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Protein Domain
IPR034468 | Set1B_RRM
Type: Domain
Description: This entry represents the RNA recognition motif (RRM) of Setd1B (also known as Set1B), a ubiquitously expressed vertebrates histone methyltransferase that exhibits high homology to yeast Set1. Set1B is localised to euchromatic nuclear speckles and associates with a complex containing six human homologues of the yeast Set1/COMPASS complex, including CXXC finger protein 1 (CFP1; homologous to yeast Spp1), Rbbp5 (homologous to yeast Swd1), Ash2 (homologous to yeast Bre2), Wdr5 (homologous to yeast Swd3), and Wdr82 (homologous to yeast Swd2). Set1B complex is a histone methyltransferase that produces trimethylated histone H3 at Lys4 [, ]. Set1B contains an N-terminal RNA recognition motif (RRM), an N-SET domain, and a C-terminal catalytic SET domain followed by a post-SET domain.
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Publication
16168379 | -
First Author: Schneider J
Year: 2005
Journal: Mol Cell
Title: Molecular regulation of histone H3 trimethylation by COMPASS and the regulation of gene expression.
Volume: 19
Issue: 6
Pages: 849-56
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Publication
11805083 | -
First Author: Krogan NJ
Year: 2002
Journal: J Biol Chem
Title: COMPASS, a histone H3 (Lysine 4) methyltransferase required for telomeric silencing of gene expression.
Volume: 277
Issue: 13
Pages: 10753-5
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Publication
11742990 | -
First Author: Roguev A
Year: 2001
Journal: EMBO J
Title: The Saccharomyces cerevisiae Set1 complex includes an Ash2 homologue and methylates histone 3 lysine 4.
Volume: 20
Issue: 24
Pages: 7137-48
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Protein
A0A1L1SV91
Organism: Mus musculus/domesticus
Length: 62  
Fragment?: false
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Protein
A0A1L1SUX7
Organism: Mus musculus/domesticus
Length: 80  
Fragment?: false
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Publication
11687631 | -
First Author: Miller T
Year: 2001
Journal: Proc Natl Acad Sci U S A
Title: COMPASS: a complex of proteins associated with a trithorax-related SET domain protein.
Volume: 98
Issue: 23
Pages: 12902-7
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Publication
12819204 | -
First Author: Nedea E
Year: 2003
Journal: J Biol Chem
Title: Organization and function of APT, a subcomplex of the yeast cleavage and polyadenylation factor involved in the formation of mRNA and small nucleolar RNA 3'-ends.
Volume: 278
Issue: 35
Pages: 33000-10
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Publication
17355966 | -
First Author: Lee JH
Year: 2007
Journal: J Biol Chem
Title: Identification and characterization of the human Set1B histone H3-Lys4 methyltransferase complex.
Volume: 282
Issue: 18
Pages: 13419-28
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Protein
Q8BFQ4
Organism: Mus musculus/domesticus
Length: 313  
Fragment?: false
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Protein
Q3URP1
Organism: Mus musculus/domesticus
Length: 737  
Fragment?: true
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Protein
D3YUD4
Organism: Mus musculus/domesticus
Length: 247  
Fragment?: true
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Protein
D3YX07
Organism: Mus musculus/domesticus
Length: 196  
Fragment?: true
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Protein
B2RXQ8
Organism: Mus musculus/domesticus
Length: 313  
Fragment?: false
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Publication
18838538 | -
First Author: Wu M
Year: 2008
Journal: Mol Cell Biol
Title: Molecular regulation of H3K4 trimethylation by Wdr82, a component of human Set1/COMPASS.
Volume: 28
Issue: 24
Pages: 7337-44
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Protein
E9PYH6
Organism: Mus musculus/domesticus
Length: 1716  
Fragment?: false
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