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Publication : Regulation of the probability of mouse odorant receptor gene choice.

First Author  Khan M Year  2011
Journal  Cell Volume  147
Issue  4 Pages  907-21
PubMed ID  22078886 Mgi Jnum  J:177633
Mgi Id  MGI:5295741 Doi  10.1016/j.cell.2011.09.049
Citation  Khan M, et al. (2011) Regulation of the probability of mouse odorant receptor gene choice. Cell 147(4):907-21
abstractText  Each olfactory sensory neuron (OSN) in mouse chooses one of 1,200 odorant receptor (OR) genes for expression. OR genes are chosen for expression by greatly varying numbers of OSNs. The mechanisms that regulate the probability of OR gene choice remain unclear. Here, we have applied the NanoString platform of fluorescent barcodes and digital readout to measure RNA levels of 577 OR genes in a single reaction, with probes designed against coding sequences. In an inbred mouse strain with a targeted deletion in the P element, we find that this element regulates OR gene choice differentially across its cluster of 24 OR genes. Importantly, the fold changes of NanoString counts in DeltaP or DeltaH mice are in very close agreement with the fold changes of cell counts, determined by in situ hybridization. Thus, the P and H elements regulate the probability of OR gene choice, not OR transcript level per OSN.
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