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Protein Coding Gene : Cpsf6 cleavage and polyadenylation specific factor 6

Primary Identifier  MGI:1913948 Organism  mouse, laboratory
Chromosome  10 NCBI Gene Number  432508
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 7.1.0)

Predicted to enable exon-exon junction complex binding activity; mRNA binding activity; and ribosomal large subunit binding activity. Predicted to contribute to RNA binding activity. Predicted to be involved in mRNA alternative polyadenylation; positive regulation of RNA export from nucleus; and protein heterotetramerization. Located in nucleus. Is expressed in several structures, including blastocyst; cerebellum; early embryo; retina nuclear layer; and telencephalon. Orthologous to human CPSF6 (cleavage and polyadenylation specific factor 6).
PHENOTYPE: Mice heterozygous for a null allele are infertile with no sperm in males. Bone marrow-derived macrophages show lower viral load and increased IFN-beta production after vesicular stomatitis virus infection. [provided by MGI curators]
  • synonyms:
  • RIKEN cDNA 4733401N12 gene,
  • cleavage and polyadenylation specific factor 6,
  • CFIM68,
  • expressed sequence AI256641,
  • 4733401N12Rik,
  • HPBRII-7,
  • HPBRII-4,
  • AI256641,
  • Cpsf6,
  • MGI:2143549

Features --> Cross References

Genome

Sequence Feature Displayer

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0 Canonical

0 CDSs

0 Exons

0 Genomic Clusters

1 Involved In Mutations

0 Strain

0 Transcripts

0 Transgenic Expressors

0 UTRs

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

8 Pathways

0 Targeted By

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

Mouse features --> Publications

 

Other

0 Driver For