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Protein Coding Gene : Atg16l1 autophagy related 16 like 1

Primary Identifier  MGI:1924290 Organism  mouse, laboratory
Chromosome  1 NCBI Gene Number  77040
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 7.1.0)

Enables identical protein binding activity. Involved in several processes, including autophagosome assembly; defense response to virus; and microautophagy. Acts upstream of or within macroautophagy; negative stranded viral RNA replication; and telencephalon development. Located in several cellular components, including autophagosome membrane; phagophore assembly site membrane; and sperm midpiece. Part of Atg12-Atg5-Atg16 complex. Is active in glutamatergic synapse. Is expressed in central nervous system and retina. Used to study inflammatory bowel disease 10. Human ortholog(s) of this gene implicated in inflammatory bowel disease 10. Orthologous to human ATG16L1 (autophagy related 16 like 1).
PHENOTYPE: Null homozygotes have a cellular defect in autophagy that results in lethality during the neonatal starvation period. Mice homozygous for hypomorphic alleles have Paneth cells with aberrant, disorganized granules similar to those found in patients with Crohn's disease. [provided by MGI curators]
  • synonyms:
  • MGI:2138177,
  • autophagy related 16 like 1,
  • RIKEN cDNA 1500009K01 gene,
  • MGI:2140801,
  • expressed sequence AI035639,
  • Atg16l1,
  • AI225866,
  • Apg16l,
  • WDR30,
  • expressed sequence AI225866,
  • APG16 autophagy 16-like (S. cerevisiae),
  • AI035639,
  • APG16L,
  • 1500009K01Rik

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Genome

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0 CDSs

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2 Involved In Mutations

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Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

2 Pathways

0 Targeted By

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

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