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Protein Coding Gene : Sox6 SRY (sex determining region Y)-box 6

Primary Identifier  MGI:98368 Organism  mouse, laboratory
Chromosome  7 NCBI Gene Number  20679
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 7.1.0)

Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including cartilage development; positive regulation of chondrocyte differentiation; and spinal cord oligodendrocyte cell differentiation. Acts upstream of or within several processes, including erythrocyte development; oligodendrocyte cell fate specification; and regulation of transcription by RNA polymerase II. Located in nucleus. Is expressed in several structures, including 1st branchial arch; alimentary system; genitourinary system; limb; and nervous system. Human ortholog(s) of this gene implicated in high grade glioma. Orthologous to human SOX6 (SRY-box transcription factor 6).
PHENOTYPE: Homozygotes for null mutations exhibit cardioskeletal myopathy, cardiac blockage, delayed growth, and early postnatal lethality. [provided by MGI curators]
  • synonyms:
  • MGI:2142080,
  • SRY (sex determining region Y)-box 6,
  • Sox6,
  • expressed sequence AI987981,
  • MGD-MRK-14507,
  • AI987981

Features --> Cross References

Genome

Sequence Feature Displayer

JG Browse Displayer

0 Canonical

0 CDSs

0 Exons

0 Genomic Clusters

1 Involved In Mutations

0 Strain

0 Transcripts

1 Transgenic Expressors

0 UTRs

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

4 Pathways

0 Targeted By

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

Mouse features --> Publications

 

Other

5 Driver For