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Publication : Adult mouse cortical cell taxonomy revealed by single cell transcriptomics.

First Author  Tasic B Year  2016
Journal  Nat Neurosci Volume  19
Issue  2 Pages  335-46
PubMed ID  26727548 Mgi Jnum  J:227758
Mgi Id  MGI:5702706 Doi  10.1038/nn.4216
Citation  Tasic B, et al. (2016) Adult mouse cortical cell taxonomy revealed by single cell transcriptomics. Nat Neurosci 19(2):335-46
abstractText  Nervous systems are composed of various cell types, but the extent of cell type diversity is poorly understood. We constructed a cellular taxonomy of one cortical region, primary visual cortex, in adult mice on the basis of single-cell RNA sequencing. We identified 49 transcriptomic cell types, including 23 GABAergic, 19 glutamatergic and 7 non-neuronal types. We also analyzed cell type-specific mRNA processing and characterized genetic access to these transcriptomic types by many transgenic Cre lines. Finally, we found that some of our transcriptomic cell types displayed specific and differential electrophysiological and axon projection properties, thereby confirming that the single-cell transcriptomic signatures can be associated with specific cellular properties.
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