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Publication : A novel gene trapping for identifying genes expressed under the control of specific transcription factors.

First Author  Naruse C Year  2007
Journal  Biochem Biophys Res Commun Volume  361
Issue  1 Pages  109-15
PubMed ID  17644066 Mgi Jnum  J:123502
Mgi Id  MGI:3718746 Doi  10.1016/j.bbrc.2007.06.161
Citation  Naruse C, et al. (2007) A novel gene trapping for identifying genes expressed under the control of specific transcription factors. Biochem Biophys Res Commun 361(1):109-15
abstractText  Gene trapping is a powerful method for identifying novel genes and for analyzing their functions. It is, however, difficult to select trapped genes on the basis of their function. To identify genes regulated by transcription factors that are important in the mesodermal formation, we selected trapped ES clones by infection of adenoviral vectors expressing Pax1, Brachyury, and Foxa2. Among 366 trapped genes, seven seemed to be controlled by these transcription factors in the first screening. The trapped genes were identified by 5' RACE, and a Northern blotting revealed that expressions of three trapped genes were regulated by these transcription factors. Expression patterns of Cx43 and HP1gamma implicated their functional relationships to Foxa2 in the formation of the notochord and the neural tube. Furthermore, Wtap mutant mice derived from the trapped clone showed defects in the mesendoderm formation. Our results indicate that trapped ES clones could be selected effectively using transcription factors.
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