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Protein Coding Gene : Upf1 UPF1 RNA helicase and ATPase

Primary Identifier  MGI:107995 Organism  mouse, laboratory
Chromosome  8 NCBI Gene Number  19704
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 7.1.0)

Predicted to enable several functions, including ATP hydrolysis activity; helicase activity; and nucleic acid binding activity. Acts upstream of or within positive regulation of mRNA cis splicing, via spliceosome. Predicted to be located in chromosome, telomeric region; cytosol; and nucleoplasm. Predicted to be part of chromatin; exon-exon junction complex; and supraspliceosomal complex. Predicted to be active in cytoplasm. Is expressed in cerebral cortex ventricular layer; cumulus oophorus; embryo; and oocyte. Orthologous to human UPF1 (UPF1 RNA helicase and ATPase).
PHENOTYPE: Mice homozygous for a targeted null mutation are viable in the pre-implantation period but resorb in the early post-implantation period. [provided by MGI curators]
  • synonyms:
  • PNORF-1,
  • B430202H16Rik,
  • RIKEN cDNA B430202H16 gene,
  • regulator of nonsense transcripts 1,
  • Upf1,
  • MGI:2441858,
  • UPF1 RNA helicase and ATPase,
  • Rent1,
  • MGD-MRK-36575

Features --> Cross References

Genome

Sequence Feature Displayer

JG Browse Displayer

0 Canonical

0 CDSs

0 Exons

0 Genomic Clusters

1 Involved In Mutations

0 Strain

0 Transcripts

0 Transgenic Expressors

0 UTRs

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

4 Pathways

0 Targeted By

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

Mouse features --> Publications

 

Other

0 Driver For