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Protein Coding Gene : Chd4 chromodomain helicase DNA binding protein 4

Primary Identifier  MGI:1344380 Organism  mouse, laboratory
Chromosome  6 NCBI Gene Number  107932
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 7.0.0)

Enables DNA-binding transcription factor binding activity. Predicted to be involved in several processes, including double-strand break repair via homologous recombination; negative regulation of macromolecule biosynthetic process; and terminal button organization. Predicted to act upstream of or within chromatin organization. Located in nucleus. Part of NuRD complex. Is expressed in several structures, including alimentary system; branchial arch; genitourinary system; hemolymphoid system; and nervous system. Used to study left ventricular noncompaction. Human ortholog(s) of this gene implicated in colorectal cancer (multiple); lung cancer (multiple); and lymphoma. Orthologous to human CHD4 (chromodomain helicase DNA binding protein 4).
PHENOTYPE: Mice homozygous for a gene trapped allele exhibit embryonic lethality between E3.5 and E4.5, absent blastocoele failure of trophectoderm function and increased apoptosis in blastocysts. [provided by MGI curators]
  • synonyms:
  • EST AA617397,
  • 9530019N15Rik,
  • BC005710,
  • D6Ertd380e,
  • RIKEN cDNA 9530019N15 gene,
  • DNA segment, Chr 6, ERATO Doi 380, expressed,
  • AA617397,
  • MGI:2384852,
  • cDNA sequence BC005710,
  • MGI:1889374,
  • MGI:1196402,
  • chromodomain helicase DNA binding protein 4,
  • Mi-2beta,
  • Chd4,
  • MGC:11769,
  • MGI:1924653

Features --> Cross References

Genome

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0 UTRs

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

22 Pathways

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Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

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