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Publication : Retinoic acid-response elements with a highly repetitive structure isolated by immuno-selection from genomic DNA.

First Author  Rudert F Year  1993
Journal  J Steroid Biochem Mol Biol Volume  46
Issue  2 Pages  121-33
PubMed ID  8664160 Mgi Jnum  J:32481
Mgi Id  MGI:79977 Doi  10.1016/0960-0760(93)90287-7
Citation  Rudert F, et al. (1993) Retinoic acid-response elements with a highly repetitive structure isolated by immuno-selection from genomic DNA. J Steroid Biochem Mol Biol 46(2):121-33
abstractText  In vitro binding sites of retinoic acid receptors (RARs) were isolated from mouse genomic DNA by immunoprecipitation of receptor/DNA complexes. PuG(G/T)TCA half-site motifs, which constitute RA-responsive elements (RAREs), were identified in the immuno-selected fragments (ISFs), some of which contained highly repetitive arrangements of this motif. Genomic Southern analysis of a number of ISFs showed them to be of a single or low copy number. Several, but not all, ISFs acted as ligand-dependent RAREs in transient transfection assays. Two ISFs with repetitive RARE motifs responded preferentially to 9-cis retinoic acid-liganded retinoid X receptor in the presence or absence of co-transfected RAR, while little activation was seen with RAR alone in the presence of either all-trans or 9-cis retinoic acid. Another ISF, containing consensus TATA and CAAT box motifs, was shown to have RA-inducible promoter activity. The results suggest a high degree of promiscuity in response element recognition by retinoid receptors.
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