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Protein Coding Gene : Col6a1 collagen, type VI, alpha 1

Primary Identifier  MGI:88459 Organism  mouse, laboratory
Chromosome  10 NCBI Gene Number  12833
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 7.0.0)

Predicted to enable collagen binding activity and platelet-derived growth factor binding activity. Acts upstream of or within several processes, including extracellular matrix organization; lung development; and skeletal muscle tissue development. Located in sarcolemma. Is active in several cellular components, including lysosome; myofibril; and sarcoplasmic reticulum. Is expressed in several structures, including alimentary system; brain; genitourinary system; heart and pericardium; and sensory organ. Used to study Bethlem myopathy and Ullrich congenital muscular dystrophy. Human ortholog(s) of this gene implicated in Bethlem myopathy and Ullrich congenital muscular dystrophy. Orthologous to human COL6A1 (collagen type VI alpha 1 chain).
PHENOTYPE: Mice homozygous for this targeted mutation display a myopathic disorder that resembles human Bethlem myopathy. Loss of contractile strength in affected muscles is associated with an unexpected latent mitochondrial dysfunction in myofibers, as well as spontaneous apoptosis. [provided by MGI curators]
  • synonyms:
  • procollagen type VI, alpha 1,
  • AI747156,
  • Col6a1,
  • MGD-MRK-2073,
  • expressed sequence AI747156,
  • MGD-MRK-2076,
  • collagen, type VI, alpha 1,
  • Col6a-1,
  • MGI:2143667

Features --> Cross References

Genome

Sequence Feature Displayer

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0 Canonical

0 CDSs

0 Exons

0 Genomic Clusters

5 Involved In Mutations

0 Strain

0 Transcripts

0 Transgenic Expressors

0 UTRs

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

17 Pathways

0 Targeted By

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

Mouse features --> Publications

 

Other

0 Driver For