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Publication : An Integrative Framework Reveals Signaling-to-Transcription Events in Toll-like Receptor Signaling.

First Author  Mertins P Year  2017
Journal  Cell Rep Volume  19
Issue  13 Pages  2853-2866
PubMed ID  28658630 Mgi Jnum  J:250938
Mgi Id  MGI:6103827 Doi  10.1016/j.celrep.2017.06.016
Citation  Mertins P, et al. (2017) An Integrative Framework Reveals Signaling-to-Transcription Events in Toll-like Receptor Signaling. Cell Rep 19(13):2853-2866
abstractText  Building an integrated view of cellular responses to environmental cues remains a fundamental challenge due to the complexity of intracellular networks in mammalian cells. Here, we introduce an integrative biochemical and genetic framework to dissect signal transduction events using multiple data types and, in particular, to unify signaling and transcriptional networks. Using the Toll-like receptor (TLR) system as a model cellular response, we generate multifaceted datasets on physical, enzymatic, and functional interactions and integrate these data to reveal biochemical paths that connect TLR4 signaling to transcription. We define the roles of proximal TLR4 kinases, identify and functionally test two dozen candidate regulators, and demonstrate a role for Ap1ar (encoding the Gadkin protein) and its binding partner, Picalm, potentially linking vesicle transport with pro-inflammatory responses. Our study thus demonstrates how deciphering dynamic cellular responses by integrating datasets on various regulatory layers defines key components and higher-order logic underlying signaling-to-transcription pathways.
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