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Protein Coding Gene : Shmt1 serine hydroxymethyltransferase 1 (soluble)

Primary Identifier  MGI:98299 Organism  mouse, laboratory
Chromosome  11 NCBI Gene Number  20425
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 7.1.0)

Enables glycine hydroxymethyltransferase activity. Involved in dTMP biosynthetic process and tetrahydrofolate interconversion. Acts upstream of or within cellular response to leukemia inhibitory factor. Located in mitochondrion. Is active in nucleus. Is expressed in several structures, including alimentary system; brain ventricular layer; genitourinary system; liver and biliary system; and skin. Human ortholog(s) of this gene implicated in breast cancer. Orthologous to human SHMT1 (serine hydroxymethyltransferase 1).
PHENOTYPE: Mice with deficiencies in this gene display abnormalities in hepatic partioning of methylenetetrahydrofolate but are otherwise healthy and fertile. [provided by MGI curators]
  • synonyms:
  • expressed sequence AI385541,
  • MGI:2144665,
  • MGI:2144138,
  • serine hydroxymethyl transferase,
  • expressed sequence C81125,
  • mshmt1,
  • Shmt1,
  • mshmt2,
  • AI385541,
  • serine hydroxymethyl transferase (soluble),
  • MGD-MRK-14406,
  • C81125,
  • Shmt,
  • expressed sequence AI324848,
  • AI324848,
  • serine hydroxymethyltransferase 1 (soluble),
  • mshmt,
  • MGI:2144126

Features --> Cross References

Genome

Sequence Feature Displayer

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0 Canonical

0 CDSs

0 Exons

0 Genomic Clusters

3 Involved In Mutations

0 Strain

0 Transcripts

0 Transgenic Expressors

0 UTRs

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

6 Pathways

0 Targeted By

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

Mouse features --> Publications

 

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0 Driver For