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Protein Coding Gene : Vps54 VPS54 GARP complex subunit

Primary Identifier  MGI:2178798 Organism  mouse, laboratory
Chromosome  11 NCBI Gene Number  245944
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 7.0.0)

Predicted to enable syntaxin binding activity. Involved in several processes, including chemical synaptic transmission; neurogenesis; and protein targeting. Acts upstream of or within musculoskeletal movement; neurofilament cytoskeleton organization; and regulation of growth. Part of GARP complex. Is active in mitochondrion. Used to study Werdnig-Hoffmann disease and amyotrophic lateral sclerosis type 1. Orthologous to human VPS54 (VPS54 subunit of GARP complex).
PHENOTYPE: Homozygous mutants show progressive ataxia, tremors, and limb paralysis with degeneration of motor nerve cells of brainstem and spinal cord and atrophy of skeletal muscle beginning about 3-weeks of age. Mutants are sterile and most die by 3-months of age. [provided by MGI curators]
  • synonyms:
  • mSLP8,
  • wr,
  • Vps54l,
  • 5330404P15Rik,
  • wobbler,
  • VPS54 GARP complex subunit,
  • Vps54,
  • MGI:98964,
  • MGI:2443077,
  • RIKEN cDNA 5330404P15 gene,
  • MGD-MRK-15459

Features --> Cross References

Genome

Sequence Feature Displayer

JG Browse Displayer

0 Canonical

0 CDSs

0 Exons

0 Genomic Clusters

1 Involved In Mutations

0 Strain

0 Transcripts

1 Transgenic Expressors

0 UTRs

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

4 Pathways

0 Targeted By

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

Mouse features --> Publications

 

Other

0 Driver For