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Protein Coding Gene : Kdm5a lysine demethylase 5A

Primary Identifier  MGI:2136980 Organism  mouse, laboratory
Chromosome  6 NCBI Gene Number  214899
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 7.1.0)

Enables several functions, including chromatin DNA binding activity; histone H3K4 demethylase activity; and transcription coactivator activity. Involved in circadian regulation of gene expression and facultative heterochromatin formation. Acts upstream of or within negative regulation of transcription by RNA polymerase II. Located in nucleus. Part of protein-DNA complex. Is expressed in several structures, including 1st branchial arch; central nervous system; early conceptus; genitourinary system; and sensory organ. Human ortholog(s) of this gene implicated in ankylosing spondylitis. Orthologous to human KDM5A (lysine demethylase 5A).
PHENOTYPE: Mice homozygous for a knock-out allele exhibit reduced body size, abnormal involuntary movement and quantitative changes in the hematopoietic stem cell and myeloid progenitor compartments, consistent with enhanced survival and increased cycling. Neonatalsurvival is sensitive to genetic background. [provided by MGI curators]
  • synonyms:
  • Rbbp2,
  • MGC:11659,
  • EST C76986,
  • C76986,
  • Jarid1a,
  • MGI:2141364,
  • AA409370,
  • expressed sequence AA409370,
  • lysine demethylase 5A,
  • MGI:1353553,
  • jumonji, AT rich interactive domain 1A (Rbp2 like),
  • Kdm5a,
  • retinoblastoma binding protein 2,
  • RBP2

Features --> Cross References

Genome

Sequence Feature Displayer

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0 Canonical

0 CDSs

0 Exons

0 Genomic Clusters

0 Involved In Mutations

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0 Transcripts

0 Transgenic Expressors

0 UTRs

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

3 Pathways

0 Targeted By

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

Mouse features --> Publications

 

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0 Driver For