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Publication : DNA sequence and structure requirements for cleavage of V(D)J recombination signal sequences.

First Author  Cuomo CA Year  1996
Journal  Mol Cell Biol Volume  16
Issue  10 Pages  5683-90
PubMed ID  8816481 Mgi Jnum  J:35347
Mgi Id  MGI:82796 Doi  10.1128/mcb.16.10.5683
Citation  Cuomo CA, et al. (1996) DNA sequence and structure requirements for cleavage of V(D)J recombination signal sequences. Mol Cell Biol 16(10):5683-90
abstractText  Purified RAG1 and RAG2 proteins can cleave DNA at V(D)J recombination signals. In dissecting the DNA sequence and structural requirements for cleavage, we find that the heptamer and nonamer motifs of the recombination signal sequence can independently direct both steps of the cleavage reaction. Proper helical spacing between these two elements greatly enhances the efficiency of cleavage, whereas improper spacing can lead to interference between the two elements. The signal sequences are surprisingly tolerant of structural variation and function efficiently when nicks, gaps, and mismatched bases are introduced or even when the signal sequence is completely single stranded. Sequence alterations that facilitate unpairing of the bases at the signal/coding border activate the cleavage reaction, suggesting that DNA distortion is critical for V(D)J recombination.
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