Type |
Details |
Score |
Genotype |
Symbol: |
Asc2/Asc2<+> |
Background: |
Not Specified |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Nle1/Nle1 |
Background: |
Not Specified |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
l11Jus2/l11Jus2 |
Background: |
Not Specified |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
l11Jus11/l11Jus11 |
Background: |
Not Specified |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Yy1/Yy1 |
Background: |
either: (involves: 129S4/SvJae) or (involves: 129S4/SvJae * C57BL/6) |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Pax6<6Neu>/Pax6<+> |
Background: |
involves: 102 * C3H |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
MP Term |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Pax6<2Neu>/Pax6<+> |
Background: |
involves: 102 * C3H |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Pax6<5Neu>/Pax6<+> |
Background: |
involves: 102 * C3H |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
MP Term |
|
•
•
•
•
•
|
MP Term |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Col4a1/Col4a1<+> |
Background: |
C3H/HeJ-Col4a1 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Col4a1/Col4a1<+> |
Background: |
C3H/HeJ-Col4a1 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Col4a1/Col4a1<+> |
Background: |
C3H/HeJ-Col4a1 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
MP Term |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Rack1/Rack1 |
Background: |
C57BL/6-Rack1 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
MP Term |
|
•
•
•
•
•
|
MP Term |
|
•
•
•
•
•
|
MP Term |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
Olesen C |
Year: |
2007 |
Journal: |
Cell Tissue Res |
Title: |
Global gene expression analysis in fetal mouse ovaries with and without meiosis and comparison of selected genes with meiosis in the testis. |
Volume: |
328 |
Issue: |
1 |
Pages: |
207-21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Claessen D |
Year: |
2008 |
Journal: |
Mol Microbiol |
Title: |
Control of the cell elongation-division cycle by shuttling of PBP1 protein in Bacillus subtilis. |
Volume: |
68 |
Issue: |
4 |
Pages: |
1029-46 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tavares JR |
Year: |
2008 |
Journal: |
J Bacteriol |
Title: |
Cytological characterization of YpsB, a novel component of the Bacillus subtilis divisome. |
Volume: |
190 |
Issue: |
21 |
Pages: |
7096-107 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gomis-Rüth FX |
Year: |
2001 |
Journal: |
Nature |
Title: |
The bacterial conjugation protein TrwB resembles ring helicases and F1-ATPase. |
Volume: |
409 |
Issue: |
6820 |
Pages: |
637-41 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gomis-Rüth FX |
Year: |
2002 |
Journal: |
J Biol Chem |
Title: |
Conjugative plasmid protein TrwB, an integral membrane type IV secretion system coupling protein. Detailed structural features and mapping of the active site cleft. |
Volume: |
277 |
Issue: |
9 |
Pages: |
7556-66 |
|
•
•
•
•
•
|
Publication |
First Author: |
Morrell JL |
Year: |
2004 |
Journal: |
Curr Biol |
Title: |
Sid4p-Cdc11p assembles the septation initiation network and its regulators at the S. pombe SPB. |
Volume: |
14 |
Issue: |
7 |
Pages: |
579-84 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ben-Yehuda S |
Year: |
2003 |
Journal: |
Science |
Title: |
RacA, a bacterial protein that anchors chromosomes to the cell poles. |
Volume: |
299 |
Issue: |
5606 |
Pages: |
532-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wu LJ |
Year: |
2003 |
Journal: |
Mol Microbiol |
Title: |
RacA and the Soj-Spo0J system combine to effect polar chromosome segregation in sporulating Bacillus subtilis. |
Volume: |
49 |
Issue: |
6 |
Pages: |
1463-75 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
The plasmid conjugative coupling protein TraD (also known as TrwB) is a basic integral inner-membrane nucleoside-triphosphate-binding protein. It is the structural prototype for the type IV secretion system coupling proteins, a family of proteins essential for macromolecular transport between cells []. This protein forms hexamers from six structurally very similar protomers []. This hexamer contains a central channel running from the cytosolic pole (formed by the all-α domains) to the membrane pole ending at the transmembrane pore shaped by 12 transmembrane helices, rendering an overall mushroom-like structure. The TrwB all-α domain appears to be the DNA-binding domain of the structure. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry contains GpsB (also known as YpsB), which is a cell cycle protein and a component of the divisome. It associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, it is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. GpsB also contributes to the recruitment of PBP1 to the division complex and is not essential for septum formation [, ]. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Spore formation in Bacillus subtilis involves a highly asymmetric cell division where the chromosome destined to enter the spore needs to move to the extreme pole of the cell in order to be captured in the prespore cell. This is accomplished by a specialised that moves the oriC region of the chromosome close to the cell pole before septation. RacA, a DNA-binding protein, is part of this system and is required for proper chromosome separation [, ]. It binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodelling into an elongated, anchored structure. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry includes fission yeast Sid4 and its homologue, Ady3 and Cnm67, from budding yeasts. Side4 is required for activation of the spg1 GTPase signalling cascade which leads to the initiation of septation and the subsequent termination of mitosis. It may act as a scaffold at the spindle pole body to which other components of the spg1 signalling cascade attach in pombe [, , ].Ady3 and Cnm67 are paraglogues. Ady3 is required for spore wall formation []. Cnm67 serves as a spacer protein of the spindle pole body outer plaque []. |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6358642 |
Assay Type: |
RNA in situ |
Annotation Date: |
2019-09-09 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:3284226 |
Pattern: |
Graded |
Stage: |
TS26 |
Assay Id: |
MGI:6358674 |
Age: |
embryonic day 18.5 |
Image: |
4A |
Note: |
Graded expression was detected in layer 4 extending across most of the rostrocaudal extent of the neocortex; expression is strong rostrally and declines to very low levels near the extreme caudal pole of the neocortex. Layer 5 is also differentially expressed, with high expression restricted to the rostral pole and a rapid decline to very low levels at the midpoint of the neocortex. Expression was very low or nondetectable in the caudal half of the neocortex. |
Specimen Label: |
4A |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6358642 |
Assay Type: |
RNA in situ |
Annotation Date: |
2019-09-09 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:3284226 |
Pattern: |
Graded |
Stage: |
TS26 |
Assay Id: |
MGI:6358674 |
Age: |
embryonic day 18.5 |
Image: |
4B |
Note: |
Graded expression was detected in layer 4 extending across most of the rostrocaudal extent of the neocortex; expression is strong rostrally and declines to very low levels near the extreme caudal pole of the neocortex. Layer 5 is also differentially expressed, with high expression restricted to the rostral pole and a rapid decline to very low levels at the midpoint of the neocortex. Expression was very low or nondetectable in the caudal half of the neocortex. |
Specimen Label: |
4B |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5001235 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1897623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:5541791 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12550 |
Note: |
The very restricted pattern in the tubules in both stage III-IV nephrons, immediately adjacent to the RC, would suggest that at least a portion of the distal tubule (macula densa region) is derived from the anlage of loop of Henle rather than the more distal tubular region of the earlier SSB/capillary loop stage nephrons. Due to the location adjacent to the vascular pole of the renal corpuscles suggests that these tubules may include the developing macula densa region. |
Specimen Label: |
GUDMAP:12550 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
Baseline |
Source: |
GEO |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
637
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Yamazaki H |
Year: |
1996 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Cloning and characterization of KAP3: a novel kinesin superfamily-associated protein of KIF3A/3B. |
Volume: |
93 |
Issue: |
16 |
Pages: |
8443-8 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
860
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
673
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
185
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
246
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
541
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
105
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Shimizu K |
Year: |
1998 |
Journal: |
J Biol Chem |
Title: |
Complex formation of SMAP/KAP3, a KIF3A/B ATPase motor-associated protein, with a human chromosome-associated polypeptide. |
Volume: |
273 |
Issue: |
12 |
Pages: |
6591-4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Guertin DA |
Year: |
2000 |
Journal: |
EMBO J |
Title: |
The role of the sid1p kinase and cdc14p in regulating the onset of cytokinesis in fission yeast. |
Volume: |
19 |
Issue: |
8 |
Pages: |
1803-15 |
|
•
•
•
•
•
|
Publication |
First Author: |
Guertin DA |
Year: |
2001 |
Journal: |
J Biol Chem |
Title: |
Interaction between the noncatalytic region of Sid1p kinase and Cdc14p is required for full catalytic activity and localization of Sid1p. |
Volume: |
276 |
Issue: |
30 |
Pages: |
28185-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mattison CP |
Year: |
2007 |
Journal: |
J Biol Chem |
Title: |
Mps1 activation loop autophosphorylation enhances kinase activity. |
Volume: |
282 |
Issue: |
42 |
Pages: |
30553-61 |
|
•
•
•
•
•
|
Publication |
First Author: |
Meyer RE |
Year: |
2013 |
Journal: |
Science |
Title: |
Mps1 and Ipl1/Aurora B act sequentially to correctly orient chromosomes on the meiotic spindle of budding yeast. |
Volume: |
339 |
Issue: |
6123 |
Pages: |
1071-4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zahner JE |
Year: |
1996 |
Journal: |
Mol Cell Biol |
Title: |
Genetic analysis of the bipolar pattern of bud site selection in the yeast Saccharomyces cerevisiae. |
Volume: |
16 |
Issue: |
4 |
Pages: |
1857-70 |
|
•
•
•
•
•
|
Publication |
First Author: |
Vincent K |
Year: |
2003 |
Journal: |
Genetics |
Title: |
Genetic interactions with CLF1 identify additional pre-mRNA splicing factors and a link between activators of yeast vesicular transport and splicing. |
Volume: |
164 |
Issue: |
3 |
Pages: |
895-907 |
|
•
•
•
•
•
|
Publication |
First Author: |
Grallert A |
Year: |
2006 |
Journal: |
Genes Dev |
Title: |
S. pombe CLASP needs dynein, not EB1 or CLIP170, to induce microtubule instability and slows polymerization rates at cell tips in a dynein-dependent manner. |
Volume: |
20 |
Issue: |
17 |
Pages: |
2421-36 |
|
•
•
•
•
•
|
Publication |
First Author: |
Long JA |
Year: |
2006 |
Journal: |
Science |
Title: |
TOPLESS regulates apical embryonic fate in Arabidopsis. |
Volume: |
312 |
Issue: |
5779 |
Pages: |
1520-3 |
|
•
•
•
•
•
|
Publication |
First Author: |
Szemenyei H |
Year: |
2008 |
Journal: |
Science |
Title: |
TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis. |
Volume: |
319 |
Issue: |
5868 |
Pages: |
1384-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Smith ZR |
Year: |
2010 |
Journal: |
Nature |
Title: |
Control of Arabidopsis apical-basal embryo polarity by antagonistic transcription factors. |
Volume: |
464 |
Issue: |
7287 |
Pages: |
423-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Archinti M |
Year: |
2010 |
Journal: |
J Cell Sci |
Title: |
SPICE--a previously uncharacterized protein required for centriole duplication and mitotic chromosome congression. |
Volume: |
123 |
Issue: |
Pt 18 |
Pages: |
3039-46 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jeske M |
Year: |
2015 |
Journal: |
Cell Rep |
Title: |
The Crystal Structure of the Drosophila Germline Inducer Oskar Identifies Two Domains with Distinct Vasa Helicase- and RNA-Binding Activities. |
Volume: |
12 |
Issue: |
4 |
Pages: |
587-98 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ephrussi A |
Year: |
1992 |
Journal: |
Nature |
Title: |
Induction of germ cell formation by oskar. |
Volume: |
358 |
Issue: |
6385 |
Pages: |
387-92 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
SPICE1 localises to spindle microtubules in mitosis and to centrioles throughout the cell cycle. Deletion of SPICE1 compromises the architecture of spindles, the integrity of the spindle pole and the process of aligning chromosomes on the spindle (chromosome congression) []. SPICE1 interacts with CEP120 in centriole duplication and elongation []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Bud site selection protein 13, also known as pre-mRNA-splicing factor CWC26, belongs to the pre-mRNA retention and splicing (RES) complex. May also be involved in positioning the proximal bud pole signal [, , ]. The presence of RES subunit homologues in numerous eukaryotes suggests that its function is evolutionarily conserved []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Mps1 is a serine/threonine-protein kinase involved in the phosphorylation of many mitotic regulators. It is required for spindle pole body (SPB) duplication and spindle checkpoint function [, ]. It is involved in sister chromatid biorientation in mitosis and meiosis []. The expression of Mps1 is regulated in a cell cycle-dependent manner, and the activity of Mps1 can be regulated through autophosphorylation []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]. The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Cdc14 is a component of the septation initiation network (SIN) and is required for the localisation and activity of Sid1. Sid1 is a protein kinase that localises asymmetrically to one spindle pole body (SPB) in anaphase disappears prior to cell separation [], []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Ndc1 is a nucleoporin protein that is a component of the Nuclear Pore Complex, and, in fungi, also of the Spindle Pole Body. It consists of six transmembrane segments, three luminal loops, both concentrated at the N terminus and cytoplasmic domains largely at the C terminus, all of which are well conserved. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This is a domain of unknown function with homology to the CH domain. This domain can be found in CEP95CEP95 is localised to the centrosome and the spindle pole []. Its function is not clear. It is phosphorylated upon DNA damage, probably by ATM or ATR [, ]. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Protein Topless is a plant transcriptional co-repressor. It may repress the expression of root-promoting genes in the top half of the embryo to allow proper differentiation of the shoot pole during the transition stage of embryogenesis [, , , ]. This entry represents Topless and related proteins belonging to the same family. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Bqt4 is a Schizosaccharomyces pombe protein that anchors telomeres to the inner nuclear membrane during both vegetative growth and meiosis. This is required for telomere clustering to the spindle pole body to form the bouquet arrangement of chromosomes during the meiotic prophase []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the OSK domain defined by Jeske and colleagues []. The domain is related to SGNH hydrolases but lacks the active site residues. The domain binds to RNA []. Proteins containing this domain include maternal effect protein oskar, which is required to keep nos RNA and staufen protein at the posterior pole in Drosophila melanogaster []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This family consists of kinesin-associated protein 3 (KAP3, also known as SMAP). In human and mouse, KAP3 is involved in tethering the chromosomes to the spindle pole and in chromosome movement. It binds to the tail domain of the KIF3A/KIF3B heterodimer to form a heterotrimeric KIF3 complex and may regulate the membrane binding of this complex [, ]. |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|