|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 2601 to 2700 out of 2899 for Fmr1

0.057s

Categories

Hits by Pathway

Hits by Strain

Hits by Category

Type Details Score
HT Experiment  
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
Publication
First Author: Del'Guidice T
Year: 2015
Journal: Proc Natl Acad Sci U S A
Title: FXR1P is a GSK3β substrate regulating mood and emotion processing.
Volume: 112
Issue: 33
Pages: E4610-9
Publication
First Author: Zhang M
Year: 2018
Journal: Dig Liver Dis
Title: FXR deletion in hepatocytes does not affect the severity of alcoholic liver disease in mice.
Volume: 50
Issue: 10
Pages: 1068-1075
Publication
First Author: Kong B
Year: 2019
Journal: Dig Liver Dis
Title: FXR deficiency alters bile acid pool composition and exacerbates chronic alcohol induced liver injury.
Volume: 51
Issue: 4
Pages: 570-576
Publication
First Author: Cook D
Year: 2014
Journal: Cell Rep
Title: FXR1P limits long-term memory, long-lasting synaptic potentiation, and de novo GluA2 translation.
Volume: 9
Issue: 4
Pages: 1402-1416
Strain
Attribute String: mutant stock, transgenic
Genotype
Symbol: Rr305/Rr305
Background: Not Specified
Zygosity: hm
Has Mutant Allele: true
Genotype
Symbol: Rr305/Rr305
Background: involves: C57BL/6
Zygosity: hm
Has Mutant Allele: true
Strain
Attribute String: coisogenic, targeted mutation, mutant strain
Strain
Attribute String: mutant strain, targeted mutation, coisogenic
Strain
Attribute String: mutant strain, targeted mutation
Genotype
Symbol: Cyfip2/Cyfip2<+>
Background: (C57BL/6N x C57BL/6J)F1
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Cyfip1/Cyfip1<+>
Background: B6J.129S7-Cyfip1
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Nufip1/Nufip1<+>
Background: C57BL/6NCrl-Nufip1/Mmucd
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Fmr1/Fmr1 Fxr2/Fxr2
Background: involves: 129P2/OlaHsd * 129S7/SvEvBrd
Zygosity: cx
Has Mutant Allele: true
Genotype
Symbol: Fxr2/Fxr2<+>
Background: C57BL/6N-Fxr2/Bay
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Cyfip2/Cyfip2<+>
Background: involves: C57BL/6
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Cyfip2/Cyfip2<+>
Background: C57BL/6N-Cyfip2/Wtsi
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Cyfip2/Cyfip2 Tg(Dkk3-cre)D9Tfur/?
Background: involves: C3H * C57BL/6 * C57BL/6N
Zygosity: cn
Has Mutant Allele: true
Publication
First Author: Morimoto K
Year: 2020
Journal: Sci Rep
Title: Reverse genetics reveals single gene of every candidate on Hybrid sterility, X Chromosome QTL 2 (Hstx2) are dispensable for spermatogenesis.
Volume: 10
Issue: 1
Pages: 9060
Publication
First Author: Hukema RK
Year: 2014
Journal: Cell Cycle
Title: Induced expression of expanded CGG RNA causes mitochondrial dysfunction in vivo.
Volume: 13
Issue: 16
Pages: 2600-8
Publication
First Author: Wu M
Year: 2000
Journal: Genomics
Title: An integrated deletion and physical map encompassing l71Rl, a chromosome 7 locus required for peri-implantation survival in the mouse.
Volume: 67
Issue: 2
Pages: 228-31
Publication
First Author: Beggs JE
Year: 2015
Journal: Biochem J
Title: The MAP kinase-interacting kinases regulate cell migration, vimentin expression and eIF4E/CYFIP1 binding.
Volume: 467
Issue: 1
Pages: 63-76
Publication
First Author: Qiao X
Year: 1998
Journal: J Neurosci
Title: Cerebellar brain-derived neurotrophic factor-TrkB defect associated with impairment of eyeblink conditioning in Stargazer mutant mice.
Volume: 18
Issue: 17
Pages: 6990-9
Strain
Attribute String: inbred strain
Strain
Attribute String: inbred strain
Strain
Attribute String: coisogenic, mutant strain, spontaneous mutation, targeted mutation
Genotype
Symbol: Cyfip2/Cyfip2
Background: C57BL/6N-Cyfip2/Cyfip2
Zygosity: ht
Has Mutant Allele: true
Genotype
Symbol: Cyfip2/Cyfip2<+> Fmr1/?
Background: involves: 129P2/OlaHsd * C57BL/6J * C57BL/6NTac
Zygosity: cx
Has Mutant Allele: true
Genotype
Symbol: Nufip1/Nufip1 S100a4/S100a4<+>
Background: involves: C57BL/6J
Zygosity: cn
Has Mutant Allele: true
Genotype
Symbol: Cyfip2/Cyfip2 Shh/Shh<+>
Background: involves: C57BL/6
Zygosity: cn
Has Mutant Allele: true
Genotype
Symbol: Cyfip2/Cyfip2<+> Eda/Eda
Background: involves: C57BL/6
Zygosity: cx
Has Mutant Allele: true
Publication
First Author: Tonelli Gombalová Z
Year: 2020
Journal: J Comp Neurol
Title: Majority of cerebrospinal fluid-contacting neurons in the spinal cord of C57Bl/6N mice is present in ectopic position unlike in other studied experimental mice strains and mammalian species.
Volume: 528
Issue: 15
Pages: 2523-2550
Publication
First Author: Fridell RA
Year: 1996
Journal: EMBO J
Title: A nuclear role for the Fragile X mental retardation protein.
Volume: 15
Issue: 19
Pages: 5408-14
Publication
First Author: Eberhart DE
Year: 1996
Journal: Hum Mol Genet
Title: The fragile X mental retardation protein is a ribonucleoprotein containing both nuclear localization and nuclear export signals.
Volume: 5
Issue: 8
Pages: 1083-91
Publication
First Author: Corbin F
Year: 1997
Journal: Hum Mol Genet
Title: The fragile X mental retardation protein is associated with poly(A)+ mRNA in actively translating polyribosomes.
Volume: 6
Issue: 9
Pages: 1465-72
Publication
First Author: Brown V
Year: 2001
Journal: Cell
Title: Microarray identification of FMRP-associated brain mRNAs and altered mRNA translational profiles in fragile X syndrome.
Volume: 107
Issue: 4
Pages: 477-87
Publication
First Author: Ohashi S
Year: 2002
Journal: J Biol Chem
Title: Identification of mRNA/protein (mRNP) complexes containing Puralpha, mStaufen, fragile X protein, and myosin Va and their association with rough endoplasmic reticulum equipped with a kinesin motor.
Volume: 277
Issue: 40
Pages: 37804-10
Publication
First Author: Ceman S
Year: 2003
Journal: Hum Mol Genet
Title: Phosphorylation influences the translation state of FMRP-associated polyribosomes.
Volume: 12
Issue: 24
Pages: 3295-305
Publication
First Author: Chen L
Year: 2003
Journal: Neuroscience
Title: The fragile X mental retardation protein binds and regulates a novel class of mRNAs containing U rich target sequences.
Volume: 120
Issue: 4
Pages: 1005-17
Publication
First Author: Todd PK
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: The fragile X mental retardation protein is required for type-I metabotropic glutamate receptor-dependent translation of PSD-95.
Volume: 100
Issue: 24
Pages: 14374-8
Publication
First Author: Stefani G
Year: 2004
Journal: J Neurosci
Title: Fragile X mental retardation protein is associated with translating polyribosomes in neuronal cells.
Volume: 24
Issue: 33
Pages: 7272-6
Publication
First Author: Kanai Y
Year: 2004
Journal: Neuron
Title: Kinesin transports RNA: isolation and characterization of an RNA-transporting granule.
Volume: 43
Issue: 4
Pages: 513-25
Publication
First Author: Antar LN
Year: 2005
Journal: Genes Brain Behav
Title: Localization of FMRP-associated mRNA granules and requirement of microtubules for activity-dependent trafficking in hippocampal neurons.
Volume: 4
Issue: 6
Pages: 350-9
Publication
First Author: Gross C
Year: 2011
Journal: J Neurosci
Title: Fragile X mental retardation protein regulates protein expression and mRNA translation of the potassium channel Kv4.2.
Volume: 31
Issue: 15
Pages: 5693-8
Publication
First Author: Zhang Y
Year: 2014
Journal: RNA Biol
Title: FMRP interacts with G-quadruplex structures in the 3'-UTR of its dendritic target Shank1 mRNA.
Volume: 11
Issue: 11
Pages: 1364-74
Publication
First Author: Miyashita A
Year: 1999
Journal: Gene
Title: Five different genes, Eif4a1, Cd68, Supl15h, Sox15 and Fxr2h, are clustered in a 40 kb region of mouse chromosome 11.
Volume: 237
Issue: 1
Pages: 53-60
Publication
First Author: Naoe H
Year: 2010
Journal: Mol Cell Biol
Title: The anaphase-promoting complex/cyclosome activator Cdh1 modulates Rho GTPase by targeting p190 RhoGAP for degradation.
Volume: 30
Issue: 16
Pages: 3994-4005
Publication
First Author: Neppl RL
Year: 2017
Journal: J Cell Biol
Title: lncRNA Chronos is an aging-induced inhibitor of muscle hypertrophy.
Volume: 216
Issue: 11
Pages: 3497-3507
HT Experiment  
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
Publication
First Author: McIntire JJ
Year: 2001
Journal: Nat Immunol
Title: Identification of Tapr (an airway hyperreactivity regulatory locus) and the linked Tim gene family.
Volume: 2
Issue: 12
Pages: 1109-16
Strain
Attribute String: inbred strain
Strain
Attribute String: inbred strain
Genotype
Symbol: Cyfip2/Cyfip2<+> Shh/Shh<+>
Background: involves: C57BL/6
Zygosity: cn
Has Mutant Allele: true
Publication      
First Author: Oak Ridge National Laboratory
Year: 2005
Journal: Unpublished
Title: Information obtained from the Oak Ridge National Laboratory Mutant Mouse Database (ORNL), Oak Ridge, TN
Publication    
First Author: O'Neil SD
Year: 2021
Journal: Elife
Title: Action potential-coupled Rho GTPase signaling drives presynaptic plasticity.
Volume: 10
Publication
First Author: Russell LB
Year: 1995
Journal: Genetics
Title: Complementation analyses for 45 mutations encompassing the pink-eyed dilution (p) locus of the mouse.
Volume: 141
Issue: 4
Pages: 1547-62
Publication
First Author: Dillman AA
Year: 2013
Journal: Nat Neurosci
Title: mRNA expression, splicing and editing in the embryonic and adult mouse cerebral cortex.
Volume: 16
Issue: 4
Pages: 499-506
Publication
First Author: Yang J
Year: 2014
Journal: Dev Cell
Title: RBM24 is a major regulator of muscle-specific alternative splicing.
Volume: 31
Issue: 1
Pages: 87-99
HT Experiment  
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
Publication
First Author: Yokoyama K
Year: 2011
Journal: EMBO J
Title: NYAP: a phosphoprotein family that links PI3K to WAVE1 signalling in neurons.
Volume: 30
Issue: 23
Pages: 4739-54
Publication
First Author: Li XY
Year: 2006
Journal: Reprod Fertil Dev
Title: Transcription profile during maternal to zygotic transition in the mouse embryo.
Volume: 18
Issue: 6
Pages: 635-45
Publication
First Author: Harikrishnan KN
Year: 2005
Journal: Nat Genet
Title: Brahma links the SWI/SNF chromatin-remodeling complex with MeCP2-dependent transcriptional silencing.
Volume: 37
Issue: 3
Pages: 254-64
Publication
First Author: Arnaud D
Year: 1993
Journal: Genomics
Title: A panel of deleted mouse X chromosome somatic cell hybrids derived from the embryonic stem cell line HD3 shows preferential breakage in the Hprt-DXHX254E region.
Volume: 18
Issue: 3
Pages: 520-6
Protein
Organism: Mus musculus/domesticus
Length: 167  
Fragment?: false
Publication  
First Author: Agarwal P
Year: 2015
Journal: BMC Genomics
Title: CGGBP1 mitigates cytosine methylation at repetitive DNA sequences.
Volume: 16
Pages: 390
Publication
First Author: Singh U
Year: 2015
Journal: Ups J Med Sci
Title: CGGBP1--an indispensable protein with ubiquitous cytoprotective functions.
Volume: 120
Issue: 4
Pages: 219-32
Publication
First Author: Agarwal P
Year: 2016
Journal: Cell Cycle
Title: Growth signals employ CGGBP1 to suppress transcription of Alu-SINEs.
Volume: 15
Issue: 12
Pages: 1558-71
Publication
First Author: Singh U
Year: 2014
Journal: Cell Cycle
Title: CGGBP1 phosphorylation constitutes a telomere-protection signal.
Volume: 13
Issue: 1
Pages: 96-105
Publication
First Author: Patel D
Year: 2019
Journal: Epigenetics Chromatin
Title: CGGBP1 regulates CTCF occupancy at repeats.
Volume: 12
Issue: 1
Pages: 57
Protein Domain
Type: Family
Description: CGG triplet repeat-binding protein 1 (CGGBP1) is a repetitive DNA-binding transcription regulator with target sites at CpG-rich sequences such as CGG repeats and Alu-SINEs and L1-LINEs []. CGGBP1 mitigates cytosine methylation at repetitive DNA sequences []. It also functions in DNA damage/repair and telomere metabolism []. There are indications that it may be involved in mRNA metabolism []. CGGBP1 ensures CTCF occupancy preferentially on repeats over canonical CTCF motifs, being a regulator of CTCF and its binding sites in interspersed repeats [].CGGBP1/p20 is known to bind to nonmethylated 5'-d(CGG)(n)-3' trinucleotide repeats in the in the promoter of the fragile X messenger ribonucleoprotein 1 (FMR1/FMRP) gene [, ], although it seems not to have a direct effect on FMR1 transcription [].
Publication
First Author: Li J
Year: 2017
Journal: Nat Neurosci
Title: Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.
Volume: 20
Issue: 8
Pages: 1150-1161
Publication
First Author: Miyata H
Year: 2016
Journal: Proc Natl Acad Sci U S A
Title: Genome engineering uncovers 54 evolutionarily conserved and testis-enriched genes that are not required for male fertility in mice.
Volume: 113
Issue: 28
Pages: 7704-10
Publication      
First Author: Mouse Genome Informatics and the Consortium: Deciphering the Mechanisms of Developmental Disorders (DMDD)
Year: 2017
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from Deciphering the Mechanisms of Developmental Disorders (DMDD)
Publication
First Author: Oostra BA
Year: 1997
Journal: Ann Med
Title: Animal model for fragile X syndrome.
Volume: 29
Issue: 6
Pages: 563-7
Publication
First Author: Zarnescu DC
Year: 2005
Journal: Dev Cell
Title: Fragile X protein functions with lgl and the par complex in flies and mice.
Volume: 8
Issue: 1
Pages: 43-52
Publication
First Author: Jasińska M
Year: 2016
Journal: Mol Neurobiol
Title: miR-132 Regulates Dendritic Spine Structure by Direct Targeting of Matrix Metalloproteinase 9 mRNA.
Volume: 53
Issue: 7
Pages: 4701-12
Publication
First Author: Lewis HA
Year: 1999
Journal: Structure
Title: Crystal structures of Nova-1 and Nova-2 K-homology RNA-binding domains.
Volume: 7
Issue: 2
Pages: 191-203
Publication
First Author: García-Mayoral MF
Year: 2007
Journal: Structure
Title: The structure of the C-terminal KH domains of KSRP reveals a noncanonical motif important for mRNA degradation.
Volume: 15
Issue: 4
Pages: 485-98
Publication
First Author: Matus-Ortega ME
Year: 2007
Journal: Biochim Biophys Acta
Title: The KH and S1 domains of Escherichia coli polynucleotide phosphorylase are necessary for autoregulation and growth at low temperature.
Volume: 1769
Issue: 3
Pages: 194-203
Publication
First Author: Oddone A
Year: 2007
Journal: EMBO Rep
Title: Structural and biochemical characterization of the yeast exosome component Rrp40.
Volume: 8
Issue: 1
Pages: 63-9
Publication  
First Author: Gloor BP
Year: 1975
Journal: Mod Probl Ophthalmol
Title: [Transport of 131I-hippuric acid and 22Na from the space between retina and pigment epithelium after experimental amotio].
Volume: 15
Pages: 115-8
Publication
First Author: Kruse C
Year: 2003
Journal: Cell Mol Life Sci
Title: The multi-KH protein vigilin associates with free and membrane-bound ribosomes.
Volume: 60
Issue: 10
Pages: 2219-27
Protein Domain
Type: Domain
Description: The K homology (KH) domain was first identified in the human heterogeneous nuclear ribonucleoprotein (hnRNP) K. An evolutionarily conserved sequence of around 70 amino acids, the KH domain is present in a wide variety of nucleic acid-binding proteins. The KH domain binds RNA, and can function in RNA recognition []. It is found in multiple copies in several proteins, where they can function cooperatively or independently. For example, in the AU-rich element RNA-binding protein KSRP, which has 4 KH domains, KH domains 3 and 4 behave as independent binding modules to interact with different regions of the AU-rich RNA targets []. The solution structure of the first KH domain of FMR1 []and of the C-terminal KH domain of hnRNP K []determined by nuclear magnetic resonance(NMR) revealed a β-α-α-β-β-α structure. Proteins containing KH domains include:Bacterial and organelle PNPases [].Archaeal and eukaryotic exosome subunits [].Eukaryotic and prokaryotic RS3 ribosomal proteins [].Vertebrate Fragile X messenger ribonucleoprotein 1 (FMR1) [].Vigilin, which has 14 KH domains [].AU-rich element RNA-binding protein KSRP.hnRNP K, which contains 3 KH domains.Human onconeural ventral antigen-1 (NOVA-1) [].According to structural analyses [, , ], the KH domain can be separated in two groups - type 1 and type 2.
Publication
First Author: Hildebrandt MR
Year: 2019
Journal: Dev Biol
Title: Cytoplasmic aggregation of DDX1 in developing embryos: Early embryonic lethality associated with Ddx1 knockout.
Volume: 455
Issue: 2
Pages: 420-433
Publication
First Author: Wei N
Year: 2015
Journal: Cell Rep
Title: SRSF10 Plays a Role in Myoblast Differentiation and Glucose Production via Regulation of Alternative Splicing.
Volume: 13
Issue: 8
Pages: 1647-57
Publication
First Author: Perez-Garcia V
Year: 2018
Journal: Nature
Title: Placentation defects are highly prevalent in embryonic lethal mouse mutants.
Volume: 555
Issue: 7697
Pages: 463-468
Publication
First Author: Bensaid M
Year: 2009
Journal: Nucleic Acids Res
Title: FRAXE-associated mental retardation protein (FMR2) is an RNA-binding protein with high affinity for G-quartet RNA forming structure.
Volume: 37
Issue: 4
Pages: 1269-79
Publication
First Author: Michaelson JJ
Year: 2017
Journal: Biol Psychiatry
Title: Neuronal PAS Domain Proteins 1 and 3 Are Master Regulators of Neuropsychiatric Risk Genes.
Volume: 82
Issue: 3
Pages: 213-223
Publication
First Author: Hashem V
Year: 2009
Journal: Hum Mol Genet
Title: Ectopic expression of CGG containing mRNA is neurotoxic in mammals.
Volume: 18
Issue: 13
Pages: 2443-51
Publication
First Author: Yao B
Year: 2014
Journal: Hum Mol Genet
Title: Genome-wide alteration of 5-hydroxymethylcytosine in a mouse model of fragile X-associated tremor/ataxia syndrome.
Volume: 23
Issue: 4
Pages: 1095-107
Publication
First Author: Wang H
Year: 2009
Journal: J Biol Chem
Title: Ca2+/calmodulin-dependent protein kinase IV links group I metabotropic glutamate receptors to fragile X mental retardation protein in cingulate cortex.
Volume: 284
Issue: 28
Pages: 18953-62
Publication
First Author: Padmashri R
Year: 2013
Journal: J Neurosci
Title: Altered structural and functional synaptic plasticity with motor skill learning in a mouse model of fragile X syndrome.
Volume: 33
Issue: 50
Pages: 19715-23
Publication  
First Author: Torossian A
Year: 2021
Journal: Neurobiol Dis
Title: Increased rates of cerebral protein synthesis in Shank3 knockout mice: Implications for a link between synaptic protein deficit and dysregulated protein synthesis in autism spectrum disorder/intellectual disability.
Volume: 148
Pages: 105213
Publication
First Author: Ruth KS
Year: 2021
Journal: Nature
Title: Genetic insights into biological mechanisms governing human ovarian ageing.
Volume: 596
Issue: 7872
Pages: 393-397
Publication
First Author: Gu Y
Year: 2003
Journal: Cytogenet Genome Res
Title: FMR2 function: insight from a mouse knockout model.
Volume: 100
Issue: 1-4
Pages: 129-39
Publication
First Author: Gabel LA
Year: 2004
Journal: J Neurosci
Title: Visual experience regulates transient expression and dendritic localization of fragile X mental retardation protein.
Volume: 24
Issue: 47
Pages: 10579-83
Publication
First Author: Liu J
Year: 2012
Journal: Hum Mol Genet
Title: Signaling defects in iPSC-derived fragile X premutation neurons.
Volume: 21
Issue: 17
Pages: 3795-805
Publication
First Author: Lu C
Year: 2012
Journal: Hum Mol Genet
Title: Fragile X premutation RNA is sufficient to cause primary ovarian insufficiency in mice.
Volume: 21
Issue: 23
Pages: 5039-47
Publication
First Author: Metsu S
Year: 2014
Journal: PLoS Genet
Title: FRA2A is a CGG repeat expansion associated with silencing of AFF3.
Volume: 10
Issue: 4
Pages: e1004242