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Search results 101 to 200 out of 245 for Mib2

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Type Details Score
GXD Expression
GXD Expression
 
Probe: MGI:3776814
Assay Type: RNA in situ
Annotation Date: 2008-04-10
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1674817
Pattern: Not Specified
Stage: TS17
Assay Id: MGI:3776839
Age: embryonic day 10.5
Image: 7B
Specimen Label: 7B
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
Probe: MGI:3776814
Assay Type: RNA in situ
Annotation Date: 2008-04-10
Strength: Trace
Sex: Not Specified
Emaps: EMAPS:3544327
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3776839
Age: postnatal day 1
Image: 7E
Note: There is slight expression in the external muscle layer.
Specimen Label: 7E
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
 
Probe: MGI:3776814
Assay Type: RNA in situ
Annotation Date: 2008-04-10
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:3185817
Pattern: Not Specified
Stage: TS17
Assay Id: MGI:3776839
Age: embryonic day 10.5
Image: 7B
Specimen Label: 7B
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
   
Assay Type: In situ reporter (knock in)
Annotation Date: 2008-03-15
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1756821
Pattern: Not Specified
Stage: TS21
Assay Id: MGI:3773868
Age: embryonic day 13.5
Image: 3d
Specimen Label: 3d
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
 
Probe: MGI:3776814
Assay Type: RNA in situ
Annotation Date: 2008-04-10
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1877127
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3776839
Age: postnatal day 1
Image: 7C
Specimen Label: 7C
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
 
Probe: MGI:3776814
Assay Type: RNA in situ
Annotation Date: 2008-04-10
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3287327
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:3776839
Age: postnatal day 1
Image: 7E
Specimen Label: 7E
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
 
Probe: MGI:3776814
Assay Type: RNA in situ
Annotation Date: 2008-04-10
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3287328
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3776839
Age: postnatal week 8
Image: 7G
Specimen Label: 7G
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
 
Assay Type: In situ reporter (knock in)
Annotation Date: 2008-03-15
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3814220
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:3773868
Age: embryonic day 12.5
Image: 3a
Note: Expression is in the cortical hem.
Specimen Label: 3a
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
 
Assay Type: In situ reporter (knock in)
Annotation Date: 2008-03-15
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3814220
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:3773868
Age: embryonic day 12.5
Image: 3b
Note: Expression is in the cortical hem.
Specimen Label: 3b
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
 
Assay Type: In situ reporter (knock in)
Annotation Date: 2008-03-15
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3814220
Pattern: Not Specified
Stage: TS20
Assay Id: MGI:3773868
Age: embryonic day 12.5
Image: 3c
Note: Expression is in the cortical hem.
Specimen Label: 3c
Detected: true
Specimen Num: 3
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Protein
Q8R516
Organism: Mus musculus/domesticus
Length: 973  
Fragment?: false
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Publication
- | J:86363
   
First Author: Fredriksson R
Year: 2003
Journal: GenBank Submission
Title: Mus musculus G protein-coupled receptor 136 (Gpr136) mRNA, complete cds
Pages: AY288426
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Protein
Q8R516-3
Organism: Mus musculus/domesticus
Length: 294  
Fragment?: false
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Protein
Q8R516-2
Organism: Mus musculus/domesticus
Length: 921  
Fragment?: false
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Publication
21903422 | J:176666
First Author: Li S
Year: 2011
Journal: Immunity
Title: Mapping a dynamic innate immunity protein interaction network regulating type I interferon production.
Volume: 35
Issue: 3
Pages: 426-40
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
- | J:165965
     
First Author: Mouse Genome Informatics and the Europhenome Mouse Phenotyping Resource
Year: 2010
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from Europhenome
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Publication
- | J:342601
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniPathway vocabulary mapping
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Publication
20059953 | J:156017
First Author: Yokoyama S
Year: 2009
Journal: Dev Cell
Title: A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.
Volume: 17
Issue: 6
Pages: 836-48
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Publication
24952961 | J:215487
First Author: Thompson CL
Year: 2014
Journal: Neuron
Title: A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.
Volume: 83
Issue: 2
Pages: 309-323
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Publication
- | J:136110
     
First Author: Velocigene
Year: 2008
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals)
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Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
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Publication
- | J:72247
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2001
Title: Gene Ontology Annotation by the MGI Curatorial Staff
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
- | J:60000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2000
Title: Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Title: Human to Mouse ISO GO annotation transfer
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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UniProt Feature
UniProt Feature
Begin: 1
Description: E3 ubiquitin-protein ligase MIB2
Type: chain
End: 973
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Allele
Mib2<tm1c(EUCOMM)Wtsi> | MGI:6369361
Name: mindbomb E3 ubiquitin protein ligase 2; targeted mutation 1c, Wellcome Trust Sanger Institute
Allele Type: Targeted
Attribute String: Conditional ready
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Interaction Experiment
Yu X (2023)
Description: PD-L1 translocation to the plasma membrane enables tumor immune evasion through MIB2 ubiquitination.
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Publication
36719382 | -
 
First Author: Yu X
Year: 2023
Journal: J Clin Invest
Title: PD-L1 translocation to the plasma membrane enables tumor immune evasion through MIB2 ubiquitination.
Volume: 133
Issue: 3
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Publication
15760269 | -
First Author: Le Borgne R
Year: 2005
Journal: PLoS Biol
Title: Two distinct E3 ubiquitin ligases have complementary functions in the regulation of delta and serrate signaling in Drosophila.
Volume: 3
Issue: 4
Pages: e96
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Publication
24121310 | -
First Author: Villumsen BH
Year: 2013
Journal: EMBO J
Title: A new cellular stress response that triggers centriolar satellite reorganization and ciliogenesis.
Volume: 32
Issue: 23
Pages: 3029-40
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Protein Domain
IPR042056 | MIB1/2_ZZ
Type: Domain
Description: This entry represents the Zinc finger found in the mammalian MIB1/2 protein and Drosophila Mind bomb (D-mib) protein. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. MIB1 and MIB2 are E3 ubiquitin-protein ligases []. Mind bomb is an E3 ubiqitin ligase that has been shown to regulate signaling by the Notch ligand Delta in Drosophila melanogaster [, , , ].
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Publication
12530964 | -
First Author: Itoh M
Year: 2003
Journal: Dev Cell
Title: Mind bomb is a ubiquitin ligase that is essential for efficient activation of Notch signaling by Delta.
Volume: 4
Issue: 1
Pages: 67-82
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Protein
Q3UTL6
Organism: Mus musculus/domesticus
Length: 368  
Fragment?: true
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Publication
15476823 | -
First Author: Legge GB
Year: 2004
Journal: J Mol Biol
Title: ZZ domain of CBP: an unusual zinc finger fold in a protein interaction module.
Volume: 343
Issue: 4
Pages: 1081-93
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Publication
8848831 | -
First Author: Ponting CP
Year: 1996
Journal: Trends Biochem Sci
Title: ZZ and TAZ: new putative zinc fingers in dystrophin and other proteins.
Volume: 21
Issue: 1
Pages: 11-13
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Publication
15705950 | -
First Author: Kang X
Year: 2005
Journal: Plant Cell
Title: HYPERSENSITIVE TO RED AND BLUE 1, a ZZ-type zinc finger protein, regulates phytochrome B-mediated red and cryptochrome-mediated blue light responses.
Volume: 17
Issue: 3
Pages: 822-35
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Publication
17009962 | -
First Author: Hnia K
Year: 2007
Journal: Biochem J
Title: ZZ domain of dystrophin and utrophin: topology and mapping of a beta-dystroglycan interaction site.
Volume: 401
Issue: 3
Pages: 667-77
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Protein Domain
IPR000433 | Znf_ZZ
Type: Domain
Description: Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents ZZ-type zinc finger domains, named because of their ability to bind two zinc ions []. These domains contain 4-6 Cys residues that participate in zinc binding (plus additional Ser/His residues), including a Cys-X2-Cys motif found in other zinc finger domains. These zinc fingers are thought to be involved in protein-protein interactions. The structure of the ZZ domain shows that it belongs to the family of cross-brace zinc finger motifs that include the PHD, RING, and FYVE domains []. ZZ-type zinc finger domains are found in:Transcription factors P300 and CBP.Plant proteins involved in light responses, such as Hrb1.E3 ubiquitin ligases MEX and MIB2 ().Dystrophin and its homologues.Single copies of the ZZ zinc finger occur in the transcriptional adaptor/coactivator proteins P300, in cAMP response element-binding protein (CREB)-binding protein (CBP) and ADA2. CBP provides several binding sites for transcriptional coactivators. The site of interaction with the tumour suppressor protein p53 and the oncoprotein E1A with CBP/P300 is a Cys-rich region that incorporates two zinc-binding motifs: ZZ-type and TAZ2-type. The ZZ-type zinc finger of CBP contains two twisted anti-parallel β-sheets and a short α-helix, and binds two zinc ions []. One zinc ion is coordinated by four cysteine residues via 2 Cys-X2-Cys motifs, and the third zinc ion viaa third Cys-X-Cys motif and a His-X-His motif. The first zinc cluster is strictly conserved, whereas the second zinc cluster displays variability in the position of the two His residues.In Arabidopsis thaliana (Mouse-ear cress), the hypersensitive to red and blue 1 (Hrb1) protein, which regulating both red and blue light responses, contains a ZZ-type zinc finger domain [].ZZ-type zinc finger domains have also been identified in the testis-specific E3 ubiquitin ligase MEX that promotes death receptor-induced apoptosis []. MEX has four putative zinc finger domains: one ZZ-type, one SWIM-type and two RING-type. The region containing the ZZ-type and RING-type zinc fingers is required for interaction with UbcH5a and MEX self-association, whereas the SWIM domain was critical for MEX ubiquitination.In addition, the Cys-rich domains of dystrophin, utrophin and an 87kDa post-synaptic protein contain a ZZ-type zinc finger with high sequence identity to P300/CBP ZZ-type zinc fingers. In dystrophin and utrophin, the ZZ-type zinc finger lies between a WW domain (flanked by and EF hand) and the C-terminal coiled-coil domain. Dystrophin is thought to act as a link between the actin cytoskeleton and the extracellular matrix, and perturbations of the dystrophin-associated complex, for example, between dystrophin and the transmembrane glycoprotein beta-dystroglycan, may lead to muscular dystrophy. Dystrophin and its autosomal homologue utrophin interact with beta-dystroglycan via their C-terminal regions, which are comprised of a WW domain, an EF hand domain and a ZZ-type zinc finger domain []. The WW domain is the primary site of interaction between dystrophin or utrophin and dystroglycan, while the EF hand and ZZ-type zinc finger domains stabilise and strengthen this interaction.
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Protein
Q80SY4
Organism: Mus musculus/domesticus
Length: 1006  
Fragment?: false
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Protein
A2RRJ6
Organism: Mus musculus/domesticus
Length: 1006  
Fragment?: false
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Protein
B2RUG2
Organism: Mus musculus/domesticus
Length: 946  
Fragment?: false
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Protein
Q9D2N4
Organism: Mus musculus/domesticus
Length: 746  
Fragment?: false
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Protein
O70585
Organism: Mus musculus/domesticus
Length: 659  
Fragment?: false
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Protein
A2CI98
Organism: Mus musculus/domesticus
Length: 653  
Fragment?: false
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Publication
16522193 | J:115880
First Author: Nishito Y
Year: 2006
Journal: Biochem J
Title: MEX is a testis-specific E3 ubiquitin ligase that promotes death receptor-induced apoptosis.
Volume: 396
Issue: 3
Pages: 411-7
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Protein
Q8BHM1
Organism: Mus musculus/domesticus
Length: 340  
Fragment?: false
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Protein
Q8BTD9
Organism: Mus musculus/domesticus
Length: 371  
Fragment?: false
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Protein
Q8BNG4
Organism: Mus musculus/domesticus
Length: 301  
Fragment?: false
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Protein
A0A1Q1PRS6
Organism: Mus musculus/domesticus
Length: 507  
Fragment?: false
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Protein
I6L9D6
Organism: Mus musculus/domesticus
Length: 685  
Fragment?: false
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Protein
G3UZJ3
Organism: Mus musculus/domesticus
Length: 559  
Fragment?: false
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Protein
A0A023ZT56
Organism: Mus musculus/domesticus
Length: 635  
Fragment?: false
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Protein
G3UYK9
Organism: Mus musculus/domesticus
Length: 490  
Fragment?: true
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Protein
A0A1Y7VJN9
Organism: Mus musculus/domesticus
Length: 567  
Fragment?: false
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Protein
A0A1Q1PRS9
Organism: Mus musculus/domesticus
Length: 582  
Fragment?: false
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Protein
Q3UHP1
Organism: Mus musculus/domesticus
Length: 685  
Fragment?: false
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Protein
A0A1Y7VL34
Organism: Mus musculus/domesticus
Length: 746  
Fragment?: false
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Protein
Q3TWL4
Organism: Mus musculus/domesticus
Length: 555  
Fragment?: true
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Protein
G3UYM7
Organism: Mus musculus/domesticus
Length: 626  
Fragment?: false
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Protein
G3UZ87
Organism: Mus musculus/domesticus
Length: 609  
Fragment?: false
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Protein
G3UXK0
Organism: Mus musculus/domesticus
Length: 566  
Fragment?: false
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Protein
Q3UHJ2
Organism: Mus musculus/domesticus
Length: 685  
Fragment?: false
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Protein
A0A1Q1NN66
Organism: Mus musculus/domesticus
Length: 529  
Fragment?: false
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Protein
A0A1Q1PRS2
Organism: Mus musculus/domesticus
Length: 551  
Fragment?: false
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Protein
G3UY34
Organism: Mus musculus/domesticus
Length: 596  
Fragment?: false
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Protein
D3YZJ1
Organism: Mus musculus/domesticus
Length: 382  
Fragment?: false
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Protein
A0A1Q1PRT9
Organism: Mus musculus/domesticus
Length: 564  
Fragment?: false
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Protein
A0A1Q1PRS4
Organism: Mus musculus/domesticus
Length: 525  
Fragment?: false
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Protein
Q8C8Z9
Organism: Mus musculus/domesticus
Length: 608  
Fragment?: false
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Protein
Q8CFR5
Organism: Mus musculus/domesticus
Length: 682  
Fragment?: false
•
•
•
•
•
Protein
A2A9Z2
Organism: Mus musculus/domesticus
Length: 617  
Fragment?: false
•
•
•
•
•
Protein
A0A023ZTV5
Organism: Mus musculus/domesticus
Length: 622  
Fragment?: false
•
•
•
•
•
Protein
Q8K0N0
Organism: Mus musculus/domesticus
Length: 602  
Fragment?: false
•
•
•
•
•
Protein
A2A9Z1
Organism: Mus musculus/domesticus
Length: 604  
Fragment?: false
•
•
•
•
•
Protein
Q80UY2
Organism: Mus musculus/domesticus
Length: 381  
Fragment?: false
•
•
•
•
•
Protein
Q05AA6
Organism: Mus musculus/domesticus
Length: 957  
Fragment?: false
•
•
•
•
•
Protein
P97432
Organism: Mus musculus/domesticus
Length: 988  
Fragment?: false
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

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Cambridge CB2 3EH, United Kingdom