Type |
Details |
Score |
Allele |
Name: |
transgene insertion 1, Brenda L Gallie |
Allele Type: |
Transgenic |
Attribute String: |
Inserted expressed sequence |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Rb1/Rb1 Rbl1/Rbl1 Trp53/Trp53 Tg(Chx10-EGFP/cre,-ALPP)2Clc/? |
Background: |
involves: 129P2/OlaHsd * 129S2/SvPas * C57BL/6 * SJL |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Rb1/Rb1 Rbl1/Rbl1<+> Trp53/Trp53 Tg(Chx10-EGFP/cre,-ALPP)2Clc/? |
Background: |
involves: 129P2/OlaHsd * 129S2/SvPas * C57BL/6 * SJL |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Rb1/Rb1 Rbl1/Rbl1<+> Tg(Chx10-EGFP/cre,-ALPP)2Clc/? |
Background: |
involves: 129P2/OlaHsd * 129S2/SvPas * C57BL/6 * SJL |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Pten/Pten Rb1/Rb1 Tg(Pbsn-cre)4Prb/? |
Background: |
involves: 129 * 129S1/Sv * 129S6/SvEvTac * C57BL/6 * DBA/2 |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Pten/Pten Rb1/Rb1<+> Tg(Pbsn-cre)4Prb/? |
Background: |
involves: 129 * 129S1/Sv * 129S6/SvEvTac * C57BL/6 * DBA/2 |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Pten/Pten Rb1/Rb1 Tg(Pbsn-cre)4Prb/? |
Background: |
involves: 129 * 129S1/Sv * 129S6/SvEvTac * C57BL/6 * DBA/2 |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Sánchez ER |
Year: |
1986 |
Journal: |
J Hered |
Title: |
Wild-derived Robertsonian translocation in mice. Chromosome 17, Rb (16:17)7, shows novel interactions with t-alleles. |
Volume: |
77 |
Issue: |
5 |
Pages: |
290-4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Safronova LD |
Year: |
1993 |
Journal: |
Genetika |
Title: |
[Disturbance of the relationship of transmission in male mice carrying the translocation Rb(8,17)1 Iem in combination with t-haplotypes]. |
Volume: |
29 |
Issue: |
12 |
Pages: |
1992-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen D |
Year: |
2002 |
Journal: |
Cancer Res |
Title: |
Genomic amplification in retinoblastoma narrowed to 0.6 megabase on chromosome 6p containing a kinesin-like gene, RBKIN. |
Volume: |
62 |
Issue: |
4 |
Pages: |
967-71 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang Y |
Year: |
2009 |
Journal: |
Cancer Prev Res (Phila) |
Title: |
Preventive effects of bexarotene and budesonide in a genetically engineered mouse model of small cell lung cancer. |
Volume: |
2 |
Issue: |
12 |
Pages: |
1059-64 |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Rb1/Rb1 Rbl1/Rbl1 Trp53/Trp53 Tg(Chx10-EGFP/cre,-ALPP)2Clc/? |
Background: |
involves: 129P2/OlaHsd * 129S2/SvPas * C57BL/6 * SJL |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 14, Sonia M Rocha-Sanchez |
Allele Type: |
Transgenic |
Attribute String: |
Dominant negative, Epitope tag, Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
Publication |
First Author: |
Annunziato S |
Year: |
2019 |
Journal: |
Nat Commun |
Title: |
Comparative oncogenomics identifies combinations of driver genes and drug targets in BRCA1-mutated breast cancer. |
Volume: |
10 |
Issue: |
1 |
Pages: |
397 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gong Y |
Year: |
2023 |
Journal: |
Dev Cell |
Title: |
Loss of RanGAP1 drives chromosome instability and rapid tumorigenesis of osteosarcoma. |
Volume: |
58 |
Issue: |
3 |
Pages: |
192-210.e11 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chow RD |
Year: |
2017 |
Journal: |
Nat Neurosci |
Title: |
AAV-mediated direct in vivo CRISPR screen identifies functional suppressors in glioblastoma. |
Volume: |
20 |
Issue: |
10 |
Pages: |
1329-1341 |
|
•
•
•
•
•
|
Publication |
First Author: |
Arora M |
Year: |
2023 |
Journal: |
Cell |
Title: |
Rapid adaptation to CDK2 inhibition exposes intrinsic cell-cycle plasticity. |
Volume: |
186 |
Issue: |
12 |
Pages: |
2628-2643.e21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Brunelli JP |
Year: |
1999 |
Journal: |
Gene |
Title: |
Sequence, expression and genetic mapping of a rainbow trout retinoblastoma cDNA. |
Volume: |
226 |
Issue: |
2 |
Pages: |
175-80 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bremner R |
Year: |
2010 |
Journal: |
Cancer Res |
Title: |
Cyclins, Cdks, E2f, Skp2, and more at the first international RB Tumor Suppressor Meeting. |
Volume: |
70 |
Issue: |
15 |
Pages: |
6114-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Peifer M |
Year: |
2012 |
Journal: |
Nat Genet |
Title: |
Integrative genome analyses identify key somatic driver mutations of small-cell lung cancer. |
Volume: |
44 |
Issue: |
10 |
Pages: |
1104-10 |
|
•
•
•
•
•
|
Publication |
First Author: |
Holmfeldt L |
Year: |
2013 |
Journal: |
Nat Genet |
Title: |
The genomic landscape of hypodiploid acute lymphoblastic leukemia. |
Volume: |
45 |
Issue: |
3 |
Pages: |
242-52 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hinds PW |
Year: |
2014 |
Journal: |
Cancer Discov |
Title: |
A little pRB can lead to big problems. |
Volume: |
4 |
Issue: |
7 |
Pages: |
764-5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhu L |
Year: |
2015 |
Journal: |
Oncogene |
Title: |
Antitumor mechanisms when pRb and p53 are genetically inactivated. |
Volume: |
34 |
Issue: |
35 |
Pages: |
4547-57 |
|
•
•
•
•
•
|
Publication |
First Author: |
Akamatsu S |
Year: |
2015 |
Journal: |
Cell Rep |
Title: |
The Placental Gene PEG10 Promotes Progression of Neuroendocrine Prostate Cancer. |
Volume: |
12 |
Issue: |
6 |
Pages: |
922-36 |
|
•
•
•
•
•
|
Publication |
First Author: |
Papale A |
Year: |
2016 |
Journal: |
Elife |
Title: |
Impairment of cocaine-mediated behaviours in mice by clinically relevant Ras-ERK inhibitors. |
Volume: |
5 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hopkins J |
Year: |
2022 |
Journal: |
Cancers (Basel) |
Title: |
PRELP Regulates Cell-Cell Adhesion and EMT and Inhibits Retinoblastoma Progression. |
Volume: |
14 |
Issue: |
19 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Giaccone G |
Year: |
2023 |
Journal: |
Semin Cancer Biol |
Title: |
Current knowledge of small cell lung cancer transformation from non-small cell lung cancer. |
Volume: |
94 |
|
Pages: |
1-10 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jin Y |
Year: |
2022 |
Journal: |
Natl Sci Rev |
Title: |
Identification of TAZ as the essential molecular switch in orchestrating SCLC phenotypic transition and metastasis. |
Volume: |
9 |
Issue: |
7 |
Pages: |
nwab232 |
|
•
•
•
•
•
|
Strain |
Attribute String: |
transgenic, mutant stock |
|
•
•
•
•
•
|
Publication |
First Author: |
Yochum GS |
Year: |
2002 |
Journal: |
Mol Cell Biol |
Title: |
Role for the mortality factors MORF4, MRGX, and MRG15 in transcriptional repression via associations with Pf1, mSin3A, and Transducin-Like Enhancer of Split. |
Volume: |
22 |
Issue: |
22 |
Pages: |
7868-76 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tominaga K |
Year: |
2003 |
Journal: |
J Biol Chem |
Title: |
MRGX is a novel transcriptional regulator that exhibits activation or repression of the B-myb promoter in a cell type-dependent manner. |
Volume: |
278 |
Issue: |
49 |
Pages: |
49618-24 |
|
•
•
•
•
•
|
Publication |
First Author: |
Saddic LA |
Year: |
2010 |
Journal: |
J Biol Chem |
Title: |
Methylation of the retinoblastoma tumor suppressor by SMYD2. |
Volume: |
285 |
Issue: |
48 |
Pages: |
37733-40 |
|
•
•
•
•
•
|
Publication |
First Author: |
Huang J |
Year: |
2006 |
Journal: |
Nature |
Title: |
Repression of p53 activity by Smyd2-mediated methylation. |
Volume: |
444 |
Issue: |
7119 |
Pages: |
629-32 |
|
•
•
•
•
•
|
Publication |
First Author: |
Donlin LT |
Year: |
2012 |
Journal: |
Genes Dev |
Title: |
Smyd2 controls cytoplasmic lysine methylation of Hsp90 and myofilament organization. |
Volume: |
26 |
Issue: |
2 |
Pages: |
114-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ohtomo-Oda R |
Year: |
2016 |
Journal: |
Hum Pathol |
Title: |
SMYD2 overexpression is associated with tumor cell proliferation and a worse outcome in human papillomavirus-unrelated nonmultiple head and neck carcinomas. |
Volume: |
49 |
|
Pages: |
145-55 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bagislar S |
Year: |
2016 |
Journal: |
Oncotarget |
Title: |
Smyd2 is a Myc-regulated gene critical for MLL-AF9 induced leukemogenesis. |
Volume: |
7 |
Issue: |
41 |
Pages: |
66398-66415 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Mortality factor 4-like protein 2 (MORF4L2 or MRGX) is a component of the NuA4 histone acetyltransferase complex []and the MSIN3A complex which acts to repress transcription by deacetylation of nucleosomal histones []. MRGX interacts with MRFAP1 and RB1 and represses the B-myb promoter in EJ cells but activates it in HeLa cells []. MRGX contains an MRG domain.The NuA4 histone acetyltransferase complex (also known as the TRRAP/TIP60-containing histone acetyltransferase complex) acetylates nucleosomal histones H4 and H2A thereby activating selected genes for transcription and is a a key regulator of transcription, cellular response to DNA damage and cell cycle control []. In yeast, where the complex was first identified, NuA4 consists of at least ACT1, ARP4, YAF9, VID21, SWC4, EAF3, EAF5, EAF6, EAF7, EPL1, ESA1, TRA1 and YNG2 []. In humans, the complex is composed of the histone acetyltransferase KAT5 (also known as TIP60) plus the subunits EP400, TRRAP/PAF400, BRD8/SMAP, EPC1, MAP1/DNMAP1, RUVBL1/TIP49, RUVBL2, ING3, actin, ACTL6A/BAF53A, MORF4L1/MRG15, MORF4L2/MRGX, MRGBP, YEATS4/GAS41, VPS72/YL1 and MEAF6 []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the SET domain of SET and MYND domain-containing protein 2 (SMYD2). SMYD2 functions as a histone methyltransferase that methylates both histones and non-histone proteins, including p53/TP53 and RB1 [, ]. It specifically methylates histone H3 'Lys-4' (H3K4me) and dimethylates histone H3 'Lys-36' (H3K36me2). It plays a role in myofilament organisation in both skeletal and cardiac muscles via Hsp90 methylation []. SMYD2 overexpression is associated with tumour cell proliferation and a worse outcome in human papillomavirus-unrelated nonmultiple head and neck carcinomas []. It regulates leukemia cell growth such that diminished SMYD2 expression upregulates SET7/9, thereby possibly shifting leukemia cells from growth to quiescence state associated with resistance to DNA damage associated with Acute Myeloid Leukemia (AML) [].The SMYD family consists of five members including SMYD1/2/3/4/5. They contain two highly conserved structural and functional domains, the SET and MYND domains. The SET domain is involved in lysine methylation, while the MYND domain is involved in protein-protein interaction. They are essential in several mammalian developmental pathways [, , , ]. |
|
•
•
•
•
•
|
Publication |
First Author: |
Kent LN |
Year: |
2017 |
Journal: |
J Clin Invest |
Title: |
Dosage-dependent copy number gains in E2f1 and E2f3 drive hepatocellular carcinoma. |
Volume: |
127 |
Issue: |
3 |
Pages: |
830-842 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hollern DP |
Year: |
2019 |
Journal: |
Breast Cancer Res Treat |
Title: |
A mouse model featuring tissue-specific deletion of p53 and Brca1 gives rise to mammary tumors with genomic and transcriptomic similarities to human basal-like breast cancer. |
Volume: |
174 |
Issue: |
1 |
Pages: |
143-155 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pajovic S |
Year: |
2011 |
Journal: |
Invest Ophthalmol Vis Sci |
Title: |
The TAg-RB murine retinoblastoma cell of origin has immunohistochemical features of differentiated Muller glia with progenitor properties. |
Volume: |
52 |
Issue: |
10 |
Pages: |
7618-24 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yamamoto K |
Year: |
2015 |
Journal: |
Leukemia |
Title: |
Early B-cell-specific inactivation of ATM synergizes with ectopic CyclinD1 expression to promote pre-germinal center B-cell lymphomas in mice. |
Volume: |
29 |
Issue: |
6 |
Pages: |
1414-24 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shi M |
Year: |
2020 |
Journal: |
Biol Reprod |
Title: |
Inactivation of TRP53, PTEN, RB1, and/or CDH1 in the ovarian surface epithelium induces ovarian cancer transformation and metastasis. |
Volume: |
102 |
Issue: |
5 |
Pages: |
1055-1064 |
|
•
•
•
•
•
|
Publication |
First Author: |
Veras MA |
Year: |
2019 |
Journal: |
J Cell Physiol |
Title: |
Loss of ENT1 increases cell proliferation in the annulus fibrosus of the intervertebral disc. |
Volume: |
234 |
Issue: |
8 |
Pages: |
13705-13719 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sun M |
Year: |
2017 |
Journal: |
Cancer Res |
Title: |
HNF1B Loss Exacerbates the Development of Chromophobe Renal Cell Carcinomas. |
Volume: |
77 |
Issue: |
19 |
Pages: |
5313-5326 |
|
•
•
•
•
•
|
Publication |
First Author: |
Akeno N |
Year: |
2017 |
Journal: |
Mol Cancer Ther |
Title: |
TRP53 Mutants Drive Neuroendocrine Lung Cancer Through Loss-of-Function Mechanisms with Gain-of-Function Effects on Chemotherapy Response. |
Volume: |
16 |
Issue: |
12 |
Pages: |
2913-2926 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hu Z |
Year: |
2015 |
Journal: |
J Clin Invest |
Title: |
TALEN-mediated targeting of HPV oncogenes ameliorates HPV-related cervical malignancy. |
Volume: |
125 |
Issue: |
1 |
Pages: |
425-36 |
|
•
•
•
•
•
|
Publication |
First Author: |
Xu X |
Year: |
2019 |
Journal: |
Autophagy |
Title: |
Gene essentiality of Tubgcp4: dosage effect and autophagy regulation in retinal photoreceptors. |
Volume: |
15 |
Issue: |
10 |
Pages: |
1834-1837 |
|
•
•
•
•
•
|
Publication |
First Author: |
Allaman-Pillet N |
Year: |
2017 |
Journal: |
Oncotarget |
Title: |
Bigh3 silencing increases retinoblastoma tumor growth in the murine SV40-TAg-Rb model. |
Volume: |
8 |
Issue: |
9 |
Pages: |
15490-15506 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ihler F |
Year: |
2012 |
Journal: |
PLoS One |
Title: |
Expression of a neuroendocrine gene signature in gastric tumor cells from CEA 424-SV40 large T antigen-transgenic mice depends on SV40 large T antigen. |
Volume: |
7 |
Issue: |
1 |
Pages: |
e29846 |
|
•
•
•
•
•
|
Publication |
First Author: |
Smith AP |
Year: |
2003 |
Journal: |
Comp Med |
Title: |
Switching of melanocyte pigmentation associated with pituitary pars intermedia tumors in Rb+/- and p27-/- female mice with yellow pelage. |
Volume: |
53 |
Issue: |
1 |
Pages: |
75-80 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tonks ID |
Year: |
2006 |
Journal: |
Pigment Cell Res |
Title: |
Pocket protein function in melanocyte homeostasis and neoplasia. |
Volume: |
19 |
Issue: |
4 |
Pages: |
260-83 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ding L |
Year: |
2008 |
Journal: |
Nature |
Title: |
Somatic mutations affect key pathways in lung adenocarcinoma. |
Volume: |
455 |
Issue: |
7216 |
Pages: |
1069-75 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ledent C |
Year: |
1995 |
Journal: |
Oncogene |
Title: |
Differentiated carcinomas develop as a consequence of the thyroid specific expression of a thyroglobulin-human papillomavirus type 16 E7 transgene. |
Volume: |
10 |
Issue: |
9 |
Pages: |
1789-97 |
|
•
•
•
•
•
|
Publication |
First Author: |
Flowers S |
Year: |
2014 |
Journal: |
Bone |
Title: |
p107-Dependent recruitment of SWI/SNF to the alkaline phosphatase promoter during osteoblast differentiation. |
Volume: |
69 |
|
Pages: |
47-54 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li Z |
Year: |
2019 |
Journal: |
J Biol Chem |
Title: |
A novel thyroid hormone receptor isoform, TRβ2-46, promotes SKP2 expression and retinoblastoma cell proliferation. |
Volume: |
294 |
Issue: |
8 |
Pages: |
2961-2969 |
|
•
•
•
•
•
|
Publication |
First Author: |
Oser MG |
Year: |
2019 |
Journal: |
Genes Dev |
Title: |
The KDM5A/RBP2 histone demethylase represses NOTCH signaling to sustain neuroendocrine differentiation and promote small cell lung cancer tumorigenesis. |
Volume: |
33 |
Issue: |
23-24 |
Pages: |
1718-1738 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cemeli T |
Year: |
2019 |
Journal: |
J Pathol |
Title: |
Cytoplasmic cyclin D1 regulates glioblastoma dissemination. |
Volume: |
248 |
Issue: |
4 |
Pages: |
501-513 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhao H |
Year: |
2017 |
Journal: |
Oncogene |
Title: |
p27T187A knockin identifies Skp2/Cks1 pocket inhibitors for advanced prostate cancer. |
Volume: |
36 |
Issue: |
1 |
Pages: |
60-70 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen J |
Year: |
2022 |
Journal: |
Oncogene |
Title: |
Lineage-restricted neoplasia driven by Myc defaults to small cell lung cancer when combined with loss of p53 and Rb in the airway epithelium. |
Volume: |
41 |
Issue: |
1 |
Pages: |
138-145 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang S |
Year: |
2022 |
Journal: |
Front Cell Dev Biol |
Title: |
The cell cycle inhibitor RB is diluted in G1 and contributes to controlling cell size in the mouse liver. |
Volume: |
10 |
|
Pages: |
965595 |
|
•
•
•
•
•
|
Publication |
First Author: |
Oser MG |
Year: |
2024 |
Journal: |
Oncogene |
Title: |
Genetically-engineered mouse models of small cell lung cancer: the next generation. |
Volume: |
43 |
Issue: |
7 |
Pages: |
457-469 |
|
•
•
•
•
•
|
Publication |
First Author: |
George J |
Year: |
2015 |
Journal: |
Nature |
Title: |
Comprehensive genomic profiles of small cell lung cancer. |
Volume: |
524 |
Issue: |
7563 |
Pages: |
47-53 |
|
•
•
•
•
•
|
Publication |
First Author: |
Voigt E |
Year: |
2021 |
Journal: |
Mol Cancer Res |
Title: |
Sox2 Is an Oncogenic Driver of Small-Cell Lung Cancer and Promotes the Classic Neuroendocrine Subtype. |
Volume: |
19 |
Issue: |
12 |
Pages: |
2015-2025 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang J |
Year: |
2024 |
Journal: |
Oncogene |
Title: |
Targeted inhibition of SCF(SKP2) confers anti-tumor activities resulting in a survival benefit in osteosarcoma. |
Volume: |
43 |
Issue: |
13 |
Pages: |
962-975 |
|
•
•
•
•
•
|
Publication |
First Author: |
Melcon G |
Year: |
2006 |
Journal: |
Hum Mol Genet |
Title: |
Loss of emerin at the nuclear envelope disrupts the Rb1/E2F and MyoD pathways during muscle regeneration. |
Volume: |
15 |
Issue: |
4 |
Pages: |
637-51 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen D |
Year: |
2009 |
Journal: |
Nature |
Title: |
Division and apoptosis of E2f-deficient retinal progenitors. |
Volume: |
462 |
Issue: |
7275 |
Pages: |
925-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nguyen BT |
Year: |
2022 |
Journal: |
Free Radic Biol Med |
Title: |
Ginsenoside Re attenuates memory impairments in aged Klotho deficient mice via interactive modulations of angiotensin II AT1 receptor, Nrf2 and GPx-1 gene. |
Volume: |
189 |
|
Pages: |
2-19 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tan KA |
Year: |
2005 |
Journal: |
Biol Reprod |
Title: |
Androgen regulation of stage-dependent cyclin D2 expression in Sertoli cells suggests a role in modulating androgen action on spermatogenesis. |
Volume: |
72 |
Issue: |
5 |
Pages: |
1151-60 |
|
•
•
•
•
•
|
Publication |
First Author: |
Valentine M |
Year: |
1989 |
Journal: |
Cytogenet Cell Genet |
Title: |
Closely linked loci on the long arm of chromosome 13 flank a specific 2;13 translocation breakpoint in childhood rhabdomyosarcoma. |
Volume: |
52 |
Issue: |
3-4 |
Pages: |
128-32 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rice JM |
Year: |
2004 |
Journal: |
Toxicol Appl Pharmacol |
Title: |
Causation of nervous system tumors in children: insights from traditional and genetically engineered animal models. |
Volume: |
199 |
Issue: |
2 |
Pages: |
175-91 |
|
•
•
•
•
•
|
Publication |
First Author: |
Quaglia F |
Year: |
2021 |
Journal: |
PLoS One |
Title: |
Differential expression of αVβ3 and αVβ6 integrins in prostate cancer progression. |
Volume: |
16 |
Issue: |
1 |
Pages: |
e0244985 |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Rb1/Rb1 Tg(Chx10-EGFP/cre,-ALPP)2Clc/? |
Background: |
involves: 129/Sv * C57BL/6 * SJL |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Hells/Hells Rb1/Rb1 Rbl1/Rbl1 Tg(Chx10-EGFP/cre,-ALPP)2Clc/? |
Background: |
involves: 129 * C57BL/6N * SJL |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Rb1/Rb1 Rbl1/Rbl1 Tg(Chx10-EGFP/cre,-ALPP)2Clc/? |
Background: |
involves: 129 * C57BL/6N * SJL |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Choong CJ |
Year: |
2021 |
Journal: |
Autophagy |
Title: |
Alternative mitochondrial quality control mediated by extracellular release. |
Volume: |
17 |
Issue: |
10 |
Pages: |
2962-2974 |
|
•
•
•
•
•
|
Publication |
First Author: |
González-Rodríguez P |
Year: |
2021 |
Journal: |
Autophagy |
Title: |
The DNA methyltransferase DNMT3A contributes to autophagy long-term memory. |
Volume: |
17 |
Issue: |
5 |
Pages: |
1259-1277 |
|
•
•
•
•
•
|
Publication |
First Author: |
Aagaard L |
Year: |
1999 |
Journal: |
EMBO J |
Title: |
Functional mammalian homologues of the Drosophila PEV-modifier Su(var)3-9 encode centromere-associated proteins which complex with the heterochromatin component M31. |
Volume: |
18 |
Issue: |
7 |
Pages: |
1923-38 |
|
•
•
•
•
•
|
Publication |
First Author: |
Vaquero A |
Year: |
2007 |
Journal: |
Nature |
Title: |
SIRT1 regulates the histone methyl-transferase SUV39H1 during heterochromatin formation. |
Volume: |
450 |
Issue: |
7168 |
Pages: |
440-4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Peters AH |
Year: |
2001 |
Journal: |
Cell |
Title: |
Loss of the Suv39h histone methyltransferases impairs mammalian heterochromatin and genome stability. |
Volume: |
107 |
Issue: |
3 |
Pages: |
323-37 |
|
•
•
•
•
•
|
Publication |
First Author: |
Peters AH |
Year: |
2003 |
Journal: |
Mol Cell |
Title: |
Partitioning and plasticity of repressive histone methylation states in mammalian chromatin. |
Volume: |
12 |
Issue: |
6 |
Pages: |
1577-89 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rice JC |
Year: |
2003 |
Journal: |
Mol Cell |
Title: |
Histone methyltransferases direct different degrees of methylation to define distinct chromatin domains. |
Volume: |
12 |
Issue: |
6 |
Pages: |
1591-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
García-Cao M |
Year: |
2004 |
Journal: |
Nat Genet |
Title: |
Epigenetic regulation of telomere length in mammalian cells by the Suv39h1 and Suv39h2 histone methyltransferases. |
Volume: |
36 |
Issue: |
1 |
Pages: |
94-9 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
68
|
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Alvarez-Venegas R |
Year: |
2002 |
Journal: |
Gene |
Title: |
SET-domain proteins of the Su(var)3-9, E(z) and trithorax families. |
Volume: |
285 |
Issue: |
1-2 |
Pages: |
25-37 |
|
•
•
•
•
•
|
Publication |
First Author: |
Firestein R |
Year: |
2000 |
Journal: |
Mol Cell Biol |
Title: |
Set domain-dependent regulation of transcriptional silencing and growth control by SUV39H1, a mammalian ortholog of Drosophila Su(var)3-9. |
Volume: |
20 |
Issue: |
13 |
Pages: |
4900-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ait-Si-Ali S |
Year: |
2004 |
Journal: |
EMBO J |
Title: |
A Suv39h-dependent mechanism for silencing S-phase genes in differentiating but not in cycling cells. |
Volume: |
23 |
Issue: |
3 |
Pages: |
605-15 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mal AK |
Year: |
2006 |
Journal: |
EMBO J |
Title: |
Histone methyltransferase Suv39h1 represses MyoD-stimulated myogenic differentiation. |
Volume: |
25 |
Issue: |
14 |
Pages: |
3323-34 |
|
•
•
•
•
•
|
Publication |
First Author: |
Carbone R |
Year: |
2006 |
Journal: |
Mol Cell Biol |
Title: |
Recruitment of the histone methyltransferase SUV39H1 and its role in the oncogenic properties of the leukemia-associated PML-retinoic acid receptor fusion protein. |
Volume: |
26 |
Issue: |
4 |
Pages: |
1288-96 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bradley SP |
Year: |
2006 |
Journal: |
J Immunol |
Title: |
The histone methyltransferase Suv39h1 increases class switch recombination specifically to IgA. |
Volume: |
177 |
Issue: |
2 |
Pages: |
1179-88 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Members of this family trimethylate 'Lys-9' of histone H3 using monomethylated H3 'Lys-9' as substrate. It also weakly methylates histone H1 (in vitro). H3 'Lys-9' trimethylation represents a specific tag for epigenetic transcriptional repression by recruiting HP1 (CBX1, CBX3 and/or CBX5) proteins to methylated histones. This enzyme mainly functions in heterochromatin regions, thereby playing a central role in the establishment of constitutive heterochromatin at pericentric and telomere regions. H3 'Lys-9' trimethylation is also required to direct DNA methylation at pericentric repeats [, , ]. SUV39H1 (the human ortholog) is targeted to histone H3 via its interaction with RB1 and is involved in many processes, such as repression of MYOD1-stimulated differentiation[], regulation of the control switch for exiting the cell cycle and entering differentiation, repression by the PML-RARA fusion protein [], BMP-induced repression, repression of switch recombination to IgA []and regulation of telomere length [, ]. SUV39H1 is a component of the eNoSC (energy-dependent nucleolar silencing) complex, a complex that mediates silencing of rDNA in response to intracellular energy status and acts by recruiting histone-modifying enzymes. The eNoSC complex is able to sense the energy status of cell: upon glucose starvation, elevation of NAD+/NADP+ ratio activates SIRT1, leading to histone H3 deacetylation followed by dimethylation of H3 at 'Lys-9' (H3K9me2) by SUV39H1 and the formation of silent chromatin in the rDNA locus []. The activity of this enzyme has been mapped to the SET domain and the adjacent cysteine-rich regions []. The SET domain was originally identified in Su(var)3-9, E(z) and Trithorax genes in Drosophila melanogaster (Fruit fly) []. The sequence conservation pattern and structure analysis of the SET domain provides clues regarding the possible active site residues of the domain. There are three conserved sequence motifs in most of the SET domains. The N-terminal motif (I) has characteristic glycines. The central motif (II) has a distinct pattern of polar and charged residues (Asn, His). The C-terminal conserved motif (III) has a characteristic dyad of polar residues. It has been shown that deregulated SUV39H1 interferes at multiple levels with mammalian higher-order chromatin organisation []and these properties depend primarily on the SET domain [, ]. Methyltransferases (EC [intenz:2.1.1.-]) constitute an important class of enzymes present in every life form. They transfer a methyl group most frequently from S-adenosyl L-methionine (SAM or AdoMet) to a nucleophilic acceptor such as oxygen leading to S-adenosyl-L-homocysteine (AdoHcy) and a methylated molecule [, , ]. All these enzymes have in common a conserved region of about 130 amino acid residues that allow them to bind SAM []. The substrates that are methylated by these enzymes cover virtually every kind of biomolecules ranging from small molecules, to lipids, proteins and nucleic acids [, , ]. Methyltransferase are therefore involved in many essential cellular processes including biosynthesis, signal transduction, protein repair, chromatin regulation and gene silencing [, , ]. More than 230 families of methyltransferases have been described so far, of which more than 220 use SAM as the methyl donor. |
|
•
•
•
•
•
|
Publication |
First Author: |
Herschkowitz JI |
Year: |
2007 |
Journal: |
Genome Biol |
Title: |
Identification of conserved gene expression features between murine mammary carcinoma models and human breast tumors. |
Volume: |
8 |
Issue: |
5 |
Pages: |
R76 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sáenz Robles MT |
Year: |
1994 |
Journal: |
Mol Cell Biol |
Title: |
Induction versus progression of brain tumor development: differential functions for the pRB- and p53-targeting domains of simian virus 40 T antigen. |
Volume: |
14 |
Issue: |
4 |
Pages: |
2686-98 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
288
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
214
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
288
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
305
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
174
|
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
288
|
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
204
|
Fragment?: |
true |
|
•
•
•
•
•
|