|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 201 to 296 out of 296 for Arid1b

<< First    < Previous  |  Next >    Last >>
0.04s
Type Details Score
GXD Expression  
Probe: MGI:3724386
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1668822
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421046
Age: embryonic day 14.5
Image: MH460; Specimen C1184
Specimen Label: MH460; Specimen C1184
Detected: true
Specimen Num: 1
GXD Expression    
Probe: MGI:6515734
Assay Type: RNA in situ
Annotation Date: 2021-04-07
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1608915
Stage: TS15
Assay Id: MGI:6515745
Age: embryonic day 9.5
Note: Expression absent in brain.
Specimen Label: 2e
Detected: false
Specimen Num: 5
GXD Expression  
Probe: MGI:3724386
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1757722
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421046
Age: embryonic day 14.5
Image: MH460; Specimen C1184
Specimen Label: MH460; Specimen C1184
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724386
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1757522
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421046
Age: embryonic day 14.5
Image: MH460; Specimen C1184
Specimen Label: MH460; Specimen C1184
Detected: true
Specimen Num: 1
GXD Expression      
Probe: MGI:3724386
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1738322
Stage: TS22
Assay Id: MGI:5421046
Age: embryonic day 14.5
Specimen Label: MH460; Specimen C1184
Detected: false
Specimen Num: 1
GXD Expression  
Probe: MGI:6515734
Assay Type: RNA in situ
Annotation Date: 2021-04-07
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1654015
Pattern: Not Specified
Stage: TS15
Assay Id: MGI:6515745
Age: embryonic day 9.5
Note: Highest levels of expression in branchial arches, optic vesicle, head mesenchyme, trunk ventral mesenchyme, and intestine.
Specimen Label: 2f
Detected: true
Specimen Num: 6
GXD Expression      
Probe: MGI:3724386
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1802422
Stage: TS22
Assay Id: MGI:5421046
Age: embryonic day 14.5
Specimen Label: MH460; Specimen C1184
Detected: false
Specimen Num: 1
GXD Expression  
Probe: MGI:6515734
Assay Type: RNA in situ
Annotation Date: 2021-04-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1605111
Pattern: Regionally restricted
Stage: TS11
Assay Id: MGI:6515745
Age: embryonic day 7.5
Note: Expression in distal epiblast and visceral endoderm.
Specimen Label: 2b
Detected: true
Specimen Num: 2
GXD Expression  
Probe: MGI:6515734
Assay Type: RNA in situ
Annotation Date: 2021-04-07
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1609815
Pattern: Not Specified
Stage: TS15
Assay Id: MGI:6515745
Age: embryonic day 9.5
Note: Highest levels of expression in branchial arches, optic vesicle, head mesenchyme, trunk ventral mesenchyme, and intestine.
Specimen Label: 2f
Detected: true
Specimen Num: 6
GXD Expression    
Probe: MGI:3724386
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1768022
Stage: TS22
Assay Id: MGI:5421046
Age: embryonic day 14.5
Note: Expression was not detected in the skull (base and vault).
Specimen Label: MH460; Specimen C1184
Detected: false
Specimen Num: 1
GXD Expression
Probe: MGI:3724386
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:2672022
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421046
Age: embryonic day 14.5
Image: MH460; Specimen C1184
Note: Expression was detected in whisker follicle.
Specimen Label: MH460; Specimen C1184
Detected: true
Specimen Num: 1
Publication
First Author: Tan L
Year: 2023
Journal: Science
Title: Lifelong restructuring of 3D genome architecture in cerebellar granule cells.
Volume: 381
Issue: 6662
Pages: 1112-1119
Publication
First Author: Yang QQ
Year: 2021
Journal: Cell Rep
Title: Nuclear isoform of FGF13 regulates post-natal neurogenesis in the hippocampus through an epigenomic mechanism.
Volume: 35
Issue: 7
Pages: 109127
Publication  
First Author: Reissig LF
Year: 2022
Journal: Front Cell Dev Biol
Title: Detailed characterizations of cranial nerve anatomy in E14.5 mouse embryos/fetuses and their use as reference for diagnosing subtle, but potentially lethal malformations in mutants.
Volume: 10
Pages: 1006620
Publication
First Author: Hurlstone AF
Year: 2002
Journal: Biochem J
Title: Cloning and characterization of hELD/OSA1, a novel BRG1 interacting protein.
Volume: 364
Issue: Pt 1
Pages: 255-64
Publication
First Author: Yang C
Year: 2019
Journal: Genomics
Title: Genome-wide association study using diversity outcross mice identified candidate genes of pancreatic cancer.
Volume: 111
Issue: 6
Pages: 1882-1888
Publication
First Author: Assimopoulos S
Year: 2022
Journal: Autism Res
Title: Genetic mouse models of autism spectrum disorder present subtle heterogenous cardiac abnormalities.
Volume: 15
Issue: 7
Pages: 1189-1208
Publication
First Author: Kawazu M
Year: 2011
Journal: PLoS One
Title: Histone demethylase JMJD2B functions as a co-factor of estrogen receptor in breast cancer proliferation and mammary gland development.
Volume: 6
Issue: 3
Pages: e17830
Publication
First Author: Kadoch C
Year: 2013
Journal: Cell
Title: Reversible disruption of mSWI/SNF (BAF) complexes by the SS18-SSX oncogenic fusion in synovial sarcoma.
Volume: 153
Issue: 1
Pages: 71-85
Publication
First Author: Wilsker D
Year: 2005
Journal: Genomics
Title: Nomenclature of the ARID family of DNA-binding proteins.
Volume: 86
Issue: 2
Pages: 242-51
Publication
First Author: Fulton SL
Year: 2022
Journal: Nat Commun
Title: Rescue of deficits by Brwd1 copy number restoration in the Ts65Dn mouse model of Down syndrome.
Volume: 13
Issue: 1
Pages: 6384
Publication
First Author: Chandler RL
Year: 2013
Journal: Mol Cell Biol
Title: ARID1a-DNA interactions are required for promoter occupancy by SWI/SNF.
Volume: 33
Issue: 2
Pages: 265-80
Publication  
First Author: Ramachandran J
Year: 2023
Journal: Dev Biol
Title: The BAF chromatin complex component SMARCC1 does not mediate GLI transcriptional repression of Hedgehog target genes in limb buds.
Volume: 504
Pages: 128-136
Publication
First Author: Notwell JH
Year: 2016
Journal: Genome Res
Title: TBR1 regulates autism risk genes in the developing neocortex.
Volume: 26
Issue: 8
Pages: 1013-22
Publication
First Author: Kim H
Year: 2022
Journal: Nat Commun
Title: Early postnatal serotonin modulation prevents adult-stage deficits in Arid1b-deficient mice through synaptic transcriptional reprogramming.
Volume: 13
Issue: 1
Pages: 5051
Publication
First Author: Staahl BT
Year: 2013
Journal: J Neurosci
Title: Kinetic analysis of npBAF to nBAF switching reveals exchange of SS18 with CREST and integration with neural developmental pathways.
Volume: 33
Issue: 25
Pages: 10348-61
Publication
First Author: Válka I
Year: 1985
Journal: Planta Med
Title: Separation and Quantification of Some Alkaloids from Fumaria parviflora by Capillary Isotachophoresis1.
Volume: 51
Issue: 4
Pages: 319-22
Publication
First Author: Wu JI
Year: 2007
Journal: Neuron
Title: Regulation of dendritic development by neuron-specific chromatin remodeling complexes.
Volume: 56
Issue: 1
Pages: 94-108
Publication  
First Author: Sokpor G
Year: 2021
Journal: Front Mol Neurosci
Title: Loss of BAF Complex in Developing Cortex Perturbs Radial Neuronal Migration in a WNT Signaling-Dependent Manner.
Volume: 14
Pages: 687581
Publication  
First Author: Guo C
Year: 2022
Journal: Dev Biol
Title: Arid1a regulates bladder urothelium formation and maintenance.
Volume: 485
Pages: 61-69
Publication
First Author: Niu F
Year: 2022
Journal: iScience
Title: m6A regulation of cortical and retinal neurogenesis is mediated by the redundant m6A readers YTHDFs.
Volume: 25
Issue: 9
Pages: 104908
Publication
First Author: Dykhuizen EC
Year: 2013
Journal: Nature
Title: BAF complexes facilitate decatenation of DNA by topoisomerase IIα.
Volume: 497
Issue: 7451
Pages: 624-7
Publication
First Author: Klochendler-Yeivin A
Year: 2000
Journal: EMBO Rep
Title: The murine SNF5/INI1 chromatin remodeling factor is essential for embryonic development and tumor suppression.
Volume: 1
Issue: 6
Pages: 500-6
Publication
First Author: de la Serna IL
Year: 2001
Journal: Nat Genet
Title: Mammalian SWI/SNF complexes promote MyoD-mediated muscle differentiation.
Volume: 27
Issue: 2
Pages: 187-90
Publication
First Author: Boogerd CJ
Year: 2023
Journal: Nat Commun
Title: Cardiomyocyte proliferation is suppressed by ARID1A-mediated YAP inhibition during cardiac maturation.
Volume: 14
Issue: 1
Pages: 4716
Publication
First Author: Sima J
Year: 2018
Journal: Proc Natl Acad Sci U S A
Title: Eda-activated RelB recruits an SWI/SNF (BAF) chromatin-remodeling complex and initiates gene transcription in skin appendage formation.
Volume: 115
Issue: 32
Pages: 8173-8178
Publication
First Author: Martinez-Mayer J
Year: 2024
Journal: Genome Med
Title: Knockout mice with pituitary malformations help identify human cases of hypopituitarism.
Volume: 16
Issue: 1
Pages: 75
Publication
First Author: Basta JM
Year: 2020
Journal: Dev Biol
Title: The core SWI/SNF catalytic subunit Brg1 regulates nephron progenitor cell proliferation and differentiation.
Volume: 464
Issue: 2
Pages: 176-187
Publication
First Author: Singh AP
Year: 2014
Journal: Nucleic Acids Res
Title: Analysis of the SWI/SNF chromatin-remodeling complex during early heart development and BAF250a repression cardiac gene transcription during P19 cell differentiation.
Volume: 42
Issue: 5
Pages: 2958-75
Publication
First Author: Perez-Garcia V
Year: 2018
Journal: Nature
Title: Placentation defects are highly prevalent in embryonic lethal mouse mutants.
Volume: 555
Issue: 7697
Pages: 463-468
Publication
First Author: Narayanan R
Year: 2015
Journal: Cell Rep
Title: Loss of BAF (mSWI/SNF) Complexes Causes Global Transcriptional and Chromatin State Changes in Forebrain Development.
Volume: 13
Issue: 9
Pages: 1842-54
Publication  
First Author: Elsen GE
Year: 2018
Journal: Front Neurosci
Title: The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.
Volume: 12
Pages: 571
Publication
First Author: Okazaki N
Year: 2003
Journal: DNA Res
Title: Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
Volume: 10
Issue: 4
Pages: 167-80
Publication
First Author: Ingham NJ
Year: 2019
Journal: PLoS Biol
Title: Mouse screen reveals multiple new genes underlying mouse and human hearing loss.
Volume: 17
Issue: 4
Pages: e3000194
Publication      
First Author: MGI and IMPC
Year: 2017
Journal: MGI Direct Data Submission
Title: MGI Curation of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC)
Publication
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
Publication
First Author: Friedel RH
Year: 2007
Journal: Brief Funct Genomic Proteomic
Title: EUCOMM--the European conditional mouse mutagenesis program.
Volume: 6
Issue: 3
Pages: 180-5
Publication        
First Author: The Gene Ontology Consortium
Year: 2016
Title: Automatic assignment of GO terms using logical inference, based on on inter-ontology links
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data
Publication
First Author: Visel A
Year: 2004
Journal: Nucleic Acids Res
Title: GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
Volume: 32
Issue: Database issue
Pages: D552-6
Publication
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
Publication      
First Author: International Knockout Mouse Consortium
Year: 2014
Journal: Database Download
Title: MGI download of modified allele data from IKMC and creation of new knockout alleles
Publication  
First Author: Bedogni F
Year: 2021
Journal: Front Mol Neurosci
Title: Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development.
Volume: 14
Pages: 686034
Publication        
First Author: DDB, FB, MGI, GOA, ZFIN curators
Year: 2001
Title: Gene Ontology annotation through association of InterPro records with GO terms
Publication      
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
Publication      
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
Publication
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
Publication
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
Publication
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
Publication        
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
Publication      
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
Publication
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
Publication
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
Publication        
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
Publication        
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
Publication      
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
Publication
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
Publication        
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
Publication      
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
Publication        
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
Publication      
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
Publication      
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
Publication      
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
Publication      
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
Publication      
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
Publication      
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
HT Experiment  
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
HT Experiment  
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
DO Term
Allele
Name: AT-rich interaction domain 1B; endonuclease-mediated mutation 1, Hao Zhu
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
Allele
Name: intergenic site 38; targeted mutation 1, Biomodels Austria
Allele Type: Targeted
Attribute String: Reporter
Allele
Name: intergenic site 38; targeted mutation 2, Biomodels Austria
Allele Type: Targeted
Attribute String: Reporter
Genotype
Symbol: Arid1b/Arid1b<+>
Background: C57BL/6J-Arid1b
Zygosity: ht
Has Mutant Allele: true
Strain
Attribute String: mutant stock, endonuclease-mediated mutation
Strain
Attribute String: mutant stock, endonuclease-mediated mutation
Publication
First Author: Mathur R
Year: 2017
Journal: Nat Genet
Title: ARID1A loss impairs enhancer-mediated gene regulation and drives colon cancer in mice.
Volume: 49
Issue: 2
Pages: 296-302
Publication
First Author: Filatova A
Year: 2019
Journal: Nat Commun
Title: Mutations in SMARCB1 and in other Coffin-Siris syndrome genes lead to various brain midline defects.
Volume: 10
Issue: 1
Pages: 2966
Publication
First Author: Wang Z
Year: 2020
Journal: Nat Cancer
Title: Dual ARID1A/ARID1B loss leads to rapid carcinogenesis and disruptive redistribution of BAF complexes.
Volume: 1
Issue: 9
Pages: 909-922
Publication
First Author: Contreras X
Year: 2021
Journal: Cell Rep
Title: A genome-wide library of MADM mice for single-cell genetic mosaic analysis.
Volume: 35
Issue: 12
Pages: 109274