| Type |
Details |
Score |
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1778727 |
|
| Stage: |
TS27 |
| Assay Id: |
MGI:3508377 |
| Age: |
postnatal newborn |
| Image: |
2 |
|
| Specimen Label: |
2 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754421 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:3508377 |
| Age: |
embryonic day 13.5 |
| Image: |
1 |
|
| Specimen Label: |
1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754427 |
|
| Stage: |
TS27 |
| Assay Id: |
MGI:3508377 |
| Age: |
postnatal newborn |
| Image: |
2 |
|
| Specimen Label: |
2 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1869223 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9342 |
|
| Specimen Label: |
GUDMAP:9342 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1666821 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:3508377 |
| Age: |
embryonic day 13.5 |
| Image: |
1 |
|
| Specimen Label: |
1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1666827 |
|
| Stage: |
TS27 |
| Assay Id: |
MGI:3508377 |
| Age: |
postnatal newborn |
| Image: |
2 |
|
| Specimen Label: |
2 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1647021 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:3508377 |
| Age: |
embryonic day 13.5 |
| Image: |
1 |
|
| Specimen Label: |
1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1647027 |
|
| Stage: |
TS27 |
| Assay Id: |
MGI:3508377 |
| Age: |
postnatal newborn |
| Image: |
2 |
|
| Specimen Label: |
2 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Ambiguous |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1647017 |
| Pattern: |
Not Specified |
| Stage: |
TS17 |
| Assay Id: |
MGI:3509657 |
| Age: |
embryonic day 10.5 |
| Image: |
1 |
| Note: |
Authors stated that in some instances they could not determine expression levels with certainty. |
| Specimen Label: |
1 |
|
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Ambiguous |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1647016 |
| Pattern: |
Not Specified |
| Stage: |
TS16 |
| Assay Id: |
MGI:3509657 |
| Age: |
embryonic day 10.5 |
| Image: |
2 |
| Note: |
Authors stated that in some instances they could not determine expression levels with certainty. |
| Specimen Label: |
2 |
|
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3185821 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:3508377 |
| Age: |
embryonic day 13.5 |
| Image: |
1 |
|
| Specimen Label: |
1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3185827 |
|
| Stage: |
TS27 |
| Assay Id: |
MGI:3508377 |
| Age: |
postnatal newborn |
| Image: |
2 |
|
| Specimen Label: |
2 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:2762123 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9341 |
|
| Specimen Label: |
GUDMAP:9341 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:2762123 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9342 |
|
| Specimen Label: |
GUDMAP:9342 |
| Detected: |
false |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1797223 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9342 |
|
| Specimen Label: |
GUDMAP:9342 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:2776027 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:5540230 |
| Age: |
postnatal day 0 |
| Image: |
GUDMAP:7228 |
|
| Specimen Label: |
GUDMAP:7228 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:1832123 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9341 |
|
| Specimen Label: |
GUDMAP:9341 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1832123 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9342 |
|
| Specimen Label: |
GUDMAP:9342 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:2851823 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9341 |
|
| Specimen Label: |
GUDMAP:9341 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:2851823 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9342 |
|
| Specimen Label: |
GUDMAP:9342 |
| Detected: |
false |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754021 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:3508377 |
| Age: |
embryonic day 13.5 |
| Image: |
1 |
|
| Specimen Label: |
1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754027 |
|
| Stage: |
TS27 |
| Assay Id: |
MGI:3508377 |
| Age: |
postnatal newborn |
| Image: |
2 |
|
| Specimen Label: |
2 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:2760523 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9341 |
|
| Specimen Label: |
GUDMAP:9341 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Absent |
| Sex: |
Male |
| Emaps: |
EMAPS:2760523 |
|
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9342 |
|
| Specimen Label: |
GUDMAP:9342 |
| Detected: |
false |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3280927 |
|
| Stage: |
TS27 |
| Assay Id: |
MGI:3508377 |
| Age: |
postnatal newborn |
| Image: |
2 |
| Note: |
The tissue was olfactory epithelium and/or bulb. |
| Specimen Label: |
2 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3267921 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:3508377 |
| Age: |
embryonic day 13.5 |
| Image: |
1 |
|
| Specimen Label: |
1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3267927 |
|
| Stage: |
TS27 |
| Assay Id: |
MGI:3508377 |
| Age: |
postnatal newborn |
| Image: |
2 |
|
| Specimen Label: |
2 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:2852723 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9341 |
|
| Specimen Label: |
GUDMAP:9341 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:2852723 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9342 |
|
| Specimen Label: |
GUDMAP:9342 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:2874723 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9341 |
|
| Specimen Label: |
GUDMAP:9341 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757721 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:3508377 |
| Age: |
embryonic day 13.5 |
| Image: |
1 |
|
| Specimen Label: |
1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757727 |
|
| Stage: |
TS27 |
| Assay Id: |
MGI:3508377 |
| Age: |
postnatal newborn |
| Image: |
2 |
|
| Specimen Label: |
2 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:2850023 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9341 |
|
| Specimen Label: |
GUDMAP:9341 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507310 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:2850023 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5540230 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:9342 |
|
| Specimen Label: |
GUDMAP:9342 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhang S |
| Year: |
2000 |
| Journal: |
GenBank Submission |
| Title: |
Mus musculus Zfp228 (Znf228) mRNA, complete cds |
|
|
| Pages: |
AF282919 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wu Y |
| Year: |
2020 |
| Journal: |
Front Cell Dev Biol |
| Title: |
Maternal UHRF1 Is Essential for Transcription Landscapes and Repression of Repetitive Elements During the Maternal-to-Zygotic Transition. |
| Volume: |
8 |
|
| Pages: |
610773 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Butterfield NC |
| Year: |
2021 |
| Journal: |
Nat Commun |
| Title: |
Accelerating functional gene discovery in osteoarthritis. |
| Volume: |
12 |
| Issue: |
1 |
| Pages: |
467 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Carninci P |
| Year: |
2005 |
| Journal: |
Science |
| Title: |
The transcriptional landscape of the mammalian genome. |
| Volume: |
309 |
| Issue: |
5740 |
| Pages: |
1559-63 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tang F |
| Year: |
2011 |
| Journal: |
PLoS One |
| Title: |
Deterministic and stochastic allele specific gene expression in single mouse blastomeres. |
| Volume: |
6 |
| Issue: |
6 |
| Pages: |
e21208 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniPathway vocabulary mapping |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wiese CB |
| Year: |
2012 |
| Journal: |
Front Neurosci |
| Title: |
A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract. |
| Volume: |
6 |
|
| Pages: |
130 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGI and IMPC |
| Year: |
2017 |
| Journal: |
MGI Direct Data Submission |
| Title: |
MGI Curation of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Guo G |
| Year: |
2010 |
| Journal: |
Dev Cell |
| Title: |
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. |
| Volume: |
18 |
| Issue: |
4 |
| Pages: |
675-85 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
FANTOM2 Data Curation in Mouse Genome Informatics |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hansen J |
| Year: |
2003 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
| Volume: |
100 |
| Issue: |
17 |
| Pages: |
9918-22 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gray PA |
| Year: |
2004 |
| Journal: |
Science |
| Title: |
Mouse brain organization revealed through direct genome-scale TF expression analysis. |
| Volume: |
306 |
| Issue: |
5705 |
| Pages: |
2255-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lennon G |
| Year: |
1999 |
| Journal: |
Database Download |
| Title: |
WashU-HHMI Mouse EST Project |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
GUDMAP Consortium |
| Year: |
2004 |
| Journal: |
www.gudmap.org |
| Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Shanghai Model Organisms Center |
| Year: |
2017 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
| Year: |
2014 |
| Journal: |
Database Release |
| Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hansen GM |
| Year: |
2008 |
| Journal: |
Genome Res |
| Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
| Volume: |
18 |
| Issue: |
10 |
| Pages: |
1670-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Helmholtz Zentrum Muenchen GmbH |
| Year: |
2010 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kawai J |
| Year: |
2001 |
| Journal: |
Nature |
| Title: |
Functional annotation of a full-length mouse cDNA collection. |
| Volume: |
409 |
| Issue: |
6821 |
| Pages: |
685-90 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Adams DJ |
| Year: |
2024 |
| Journal: |
Nature |
| Title: |
Genetic determinants of micronucleus formation in vivo. |
| Volume: |
627 |
| Issue: |
8002 |
| Pages: |
130-136 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGD Nomenclature Committee |
| Year: |
1995 |
|
| Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zambrowicz BP |
| Year: |
2003 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
| Volume: |
100 |
| Issue: |
24 |
| Pages: |
14109-14 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
GemPharmatech |
| Year: |
2020 |
|
| Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
| Year: |
2008 |
| Journal: |
Database Download |
| Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Cyagen Biosciences Inc. |
| Year: |
2022 |
|
| Title: |
Cyagen Biosciences Website. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
GOA curators |
| Year: |
2016 |
|
| Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
| Year: |
2004 |
| Journal: |
Database Release |
| Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Okazaki Y |
| Year: |
2002 |
| Journal: |
Nature |
| Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
| Volume: |
420 |
| Issue: |
6915 |
| Pages: |
563-73 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2010 |
|
| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGI Genome Annotation Group and UniGene Staff |
| Year: |
2015 |
| Journal: |
Database Download |
| Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
|
| Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
| UniProt Feature |
| Begin: |
1 |
| Description: |
E3 ubiquitin-protein ligase RNF114 |
| Type: |
chain |
| End: |
229 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
57
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yang P |
| Year: |
2014 |
| Journal: |
Immunobiology |
| Title: |
Identification of RNF114 as a novel positive regulatory protein for T cell activation. |
| Volume: |
219 |
| Issue: |
6 |
| Pages: |
432-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Rodriguez MS |
| Year: |
2014 |
| Journal: |
Cell Death Dis |
| Title: |
The RING ubiquitin E3 RNF114 interacts with A20 and modulates NF-κB activity and T-cell activation. |
| Volume: |
5 |
|
| Pages: |
e1399 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bijlmakers MJ |
| Year: |
2011 |
| Journal: |
Hum Mol Genet |
| Title: |
Functional analysis of the RNF114 psoriasis susceptibility gene implicates innate immune responses to double-stranded RNA in disease pathogenesis. |
| Volume: |
20 |
| Issue: |
16 |
| Pages: |
3129-37 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Capon F |
| Year: |
2008 |
| Journal: |
Hum Mol Genet |
| Title: |
Identification of ZNF313/RNF114 as a novel psoriasis susceptibility gene. |
| Volume: |
17 |
| Issue: |
13 |
| Pages: |
1938-45 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
RNF114 (also known as Znf313) is a p21(WAF1)-targeting ubiquitin E3 ligase that interacts with X-linked inhibitor of apoptosis (XIAP)-associated factor 1 (XAF1) and may play a role in p53-mediated cell-fate decisions [, ]. It is involved in immune response to double-stranded RNA in disease pathogenesis []. Moreover, RNF114 interacts with A20 and modulates its ubiquitination []. It negatively regulates nuclear factor-kappaB (NF-kappaB)-dependent transcription and positively regulates T-cell activation []. RNF114 may play a putative role in the regulation of immune responses, since it corresponds to a novel psoriasis susceptibility gene, ZNF313 []. RNF114, together with three closely related proteins: RNF125, RNF138 and RNF166, forms a novel family of ubiquitin ligases with a C3HC4-type RING-HC finger, a C2HC-, and two C2H2-type zinc fingers, as well as a ubiquitin interacting motif (UIM). |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wellner U |
| Year: |
2009 |
| Journal: |
Nat Cell Biol |
| Title: |
The EMT-activator ZEB1 promotes tumorigenicity by repressing stemness-inhibiting microRNAs. |
| Volume: |
11 |
| Issue: |
12 |
| Pages: |
1487-95 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gosti F |
| Year: |
1995 |
| Journal: |
Mol Gen Genet |
| Title: |
Abscisic acid-dependent and -independent regulation of gene expression by progressive drought in Arabidopsis thaliana. |
| Volume: |
246 |
| Issue: |
1 |
| Pages: |
10-8 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
This zinc-binding domain is found in plant drought induced 19 (Di19) proteins, animal E3 ubiquitin-protein ligases (RNF114/KCMF1/RNF138/RNF125) and transcriptional repressors (ZEB1/ZEB2). Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought []. KCMF1 and RNF114 are E3 ubiquitin-protein ligases [, ], while ZEB1 represses transcription by binding to the E box (5'-CANNTG-3') []. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lee MG |
| Year: |
2014 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
XAF1 directs apoptotic switch of p53 signaling through activation of HIPK2 and ZNF313. |
| Volume: |
111 |
| Issue: |
43 |
| Pages: |
15532-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jang JH |
| Year: |
2004 |
| Journal: |
FEBS Lett |
| Title: |
FIGC, a novel FGF-induced ubiquitin-protein ligase in gastric cancers. |
| Volume: |
578 |
| Issue: |
1-2 |
| Pages: |
21-5 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Giannini AL |
| Year: |
2008 |
| Journal: |
Biochem J |
| Title: |
T-cell regulator RNF125/TRAC-1 belongs to a novel family of ubiquitin ligases with zinc fingers and a ubiquitin-binding domain. |
| Volume: |
410 |
| Issue: |
1 |
| Pages: |
101-11 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Han D |
| Year: |
2016 |
| Journal: |
PLoS One |
| Title: |
Ubiquitylation of Rad51d Mediated by E3 Ligase Rnf138 Promotes the Homologous Recombination Repair Pathway. |
| Volume: |
11 |
| Issue: |
5 |
| Pages: |
e0155476 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chen HW |
| Year: |
2015 |
| Journal: |
Sci Rep |
| Title: |
Ring finger protein 166 potentiates RNA virus-induced interferon-β production via enhancing the ubiquitination of TRAF3 and TRAF6. |
| Volume: |
5 |
|
| Pages: |
14770 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
This entry includes the C2HC RNF-type zinc finger.Ubiquitination is a post-translational modification that mediates the covalent attachment of ubiquitin (Ub), a small, highly conserved, cytoplasmic protein of 76 amino acid residues, to target proteins. This conjugation is catalyzed by the sequential action of three enzymes: Ub-activating (E1) enzyme, Ub-conjugating (E2) enzyme and Ub ligase (E3). A large number of RING finger (RNF) proteins are present in eukaryotic cells and the majority of them are believed to act as E3 ubiquitin ligases. The closely related proteins RNF125/TRAC-1, RNF114 (also known as Zpf313), RNF138 (or NARF) and RNF166 contain, apart from the RING domain, a C2HC (Cys2-His-Cys)- and two C2H2 (Cys2-His2)-type zinc fingers, as well as an ubiquitin interacting motif (UIM) [, , , ].Some proteins known to contain a C2HC RNF-type zinc finger are listed below:Mammalian RNF125/T-cell RING protein in activation 1 (TRAC-1)/, a positive regulator of T-cell activation. It negatively regulates RIG-1 mediated antiviral activity via conjugating ubiquitin chains to RIG-1 and MDA5, leading to their degradation by the proteasome.Vertebrate RNF114, acts as negative regulator of NF-kappaB-dependent transcription. It interacts with A20 in T cells and modulates A20 ubiquitylation.Vertebrate RNF138, likely involved in regulating homologous recombination repair pathway.Vertebrate RNF166, potentiates the RNA virus-induced production of IFN-beta via enhancing the ubiquitination of TRAF3 and TRAF6. |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
146
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
330
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
245
 |
| Fragment?: |
false |
|
•
•
•
•
•
|