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Category: HTExperiment
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Type Details Score
HT Experiment
GSE58108 | Rlf, a widely-spaced zinc finger protein, is involved in maintaining epigenetic marks at CpG island shores and enhancer elements across the genome
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE210492 | Complement factor B is critical for sub-RPE deposit accumulation in a model of Doyne honeycomb retinal dystrophy with features of age-related macular degeneration
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE217677 | Maternal dietary fat during lactation shapes single nucleus transcriptomic profile of postnatal offspring hypothalamus in a sexually dimorphic manner in mice
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-MEXP-2542 | Transcription profiling of mouse heart from mice with a SMYD2 heart-specific deletion
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-45583 | A hypomorphic Lsd1 allele results in heart development defects in mice
Series Id: GSE45583
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE111752 | Droplet based single cell RNA sequencing profiles of a murine model of type-1 diabetes
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE101393 | A conserved RNA-binding protein Celf1 controls cell differentiation in vertebrate eye development
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE102583 | A Sall1-NuRD interaction regulates multipotent nephron progenitors and is required for loop of Henle formation
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE104556 | A broad single-cell transcriptome view of the male mouse germ line
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-GEOD-7196 | Transcription profiling of mouse hearts from mutants lacking estrogen-related receptor alpha (ERRalpha), a nuclear receptor
Series Id: GSE7196
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-TABM-426 | Transcription profiling of testis from wild type mice and mice with a Sertoli-specific ablation of Dicer
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-42829 | microRNA levels are altered in male and female mouse hearts: a role for miR-222
Series Id: GSE42829
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
E-GEOD-10535 | Transcription profiling of prCAD -/- mouse, a mouse model for retinal degeneration
Series Id: GSE10535
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-49937 | Expression data from the hearts of a mouse model of spontaneous myocardial infarction
Series Id: GSE49937
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-39062 | Genome-wide expression profiling analysis of a Hmgn1, 3 and 5 mutant mouse model
Series Id: GSE39062
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-33009 | Molecular characterisation of transport mechanisms at the developing mouse blood-CSF interface: a transcriptome approach
Series Id: GSE33009
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
E-GEOD-34889 | Molecular Mechanisms of Diabetic Neuropathy: A Transcriptional Profling Study of db/db Mouse Sciatic Nerve
Series Id: GSE34889
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-69311 | Yap and Taz in Neural Crest play a Crucial Role in Smooth Muscle Development
Series Id: GSE69311
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-74344 | Oocyte-expressed Yes-associated Protein (YAP) is a Key Activator of the Early Zygotic Genome in Mouse
Series Id: GSE74344
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-67229 | Topaz1, a germ cell specific factor essential for male meiotic progression
Series Id: GSE67229
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-65247 | A MEIG1/PACRG complex in the manchette is essential for building the sperm flagella
Series Id: GSE65247
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-MTAB-2782 | Transcriptional profilling of female mice liver as a function of age
 
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
E-GEOD-60373 | A relative shift in cloacal location repositions external genitalia in amniote evolution
Series Id: GSE60373
Experiment Type: RNA-Seq
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
E-MTAB-6861 | Transcriptomic analysis of the developing cerebellum in a mouse model for SRD5A3-CDG
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-MTAB-7869 | Transcriptional disorganization of fibroblasts is a hallmark of the aging heart
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
GSE180203 | Activation of a Hippocampal CREB-pCREB-miRNA-MEF2 Axis Modulates Individual Variation of Spatial Learning and Memory Capability
 
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: GEO
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HT Experiment
GSE128361 | Hepatic transcriptomics reveals that lipogenesis is a key signaling pathway in isocitrate dehydrogenase 2 deficient mice
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE164350 | Asc-1 regulates white versus beige adipocyte fate in a subcutaneous stromal cell population
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE85039 | A multi-scale model for hair follicle reveals heterogeneous skin domains drive rapid spatiotemporal hair growth patterning
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE129821 | Shox2 deficiency leads to a unique loss of the palatine process of the maxilla
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE100331 | Myosin Heavy Chain-embryonic is a crucial regulator of skeletal muscle development and differentiation.
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE175362 | Loss of BAF complex in developing cortex perturbs radial neuronal migration in a WNT signaling-dependent manner
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE179119 | The transcriptional repressor REST is a major suppressor of endocrine differentiation during pancreas organogenesis [RNA-seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE144802 | Identification of a Novel PP2A Regulator, WNK1, as Critical For Uterine Function
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE155898 | LARP7, a new ROS sensor, protects against heart failure by enhancing mitochondrial biogenesis
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE204859 | Defects in placental syncytiotrophoblast cells are a common cause of developmental heart disease
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE83243 | Disruption of the ATXN1-CIC complex causes a spectrum of neurobehavioral phenotypes in mice and humans
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE137227 | miR-302 is a temporal regulator of neural crest development [Mouse RNA-seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE137240 | miR-302 is a temporal regulator of neural crest development [Mouse miRNA-seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE60219 | Transcriptional landscape of different brain regions in a Rett syndrome mouse model
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE234490 | Acyl-CoA thioesterase-2 facilitates beta-oxidation in glycolytic skeletal muscle in a lipid supply dependent manner [Chow fed]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE202297 | Identification of a shared disease-associated oligodendrocyte signature among multiple CNS pathologies
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE212068 | Single-cell RNA based phenotyping reveals a pivotal role of thyroid hormone receptor alpha for hypothalamic development
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE225554 | A Cellular Atlas of the Down Syndrome Brain Identifies Accelerated Oligodendrocyte Precursor Cell Senescence
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE184045 | Lymphatic endothelial cell identity is controlled by a GATA2 bound enhancer (Microarray)
 
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: GEO
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HT Experiment
GSE7598 | Identification and characterization of genes expressed in the mouse ZPA using a novel microarray approach
Series Id: E-GEOD-7598
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: GEO
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HT Experiment
GSE58158 | Digit patterning is controlled by a Bmp-Sox9-Wnt Turing network modulated by morphogen gradients
Series Id: E-GEOD-58158
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: GEO
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HT Experiment
GSE222924 | Kif2a operates as a gatekeeper of nociception in sensory neurons [RNA-seq - 6 months]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE240557 | Kif2a operates as a gatekeeper of nociception in sensory neurons [RNA-seq - 1 month]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE60441 | Ebf2 is a selective marker of brown and beige adipogenic precursor cells (RNA-seq)
Series Id: E-GEOD-60441
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE60442 | Ebf2 is a selective marker of brown and beige adipogenic precursor cells (Microarray)
Series Id: E-GEOD-60442
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: GEO
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HT Experiment
GSE78056 | Odd skipped-related 1 (Osr1) identifies a population of embryonic fibro-adipogenic progenitors regulating myogenesis during limb development
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE227799 | A Treg specific long non-coding RNA maintains immune-metabolic homeostasis in ageing liver [Altre-WT and Altre-KO]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE229374 | A Treg specific long non-coding RNA maintains immune-metabolic homeostasis in ageing liver [Young Treg]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE125932 | Transcriptome analysis of mouse and human sinoatrial node cells reveals a conserved genetic program
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-MTAB-7149 | Single cell transcriptional profiling of aortic endothelium identifies a hierarchy from endovascular progenitors to differentiated cells
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
GSE159941 | Onset of taste cell renewal starts at birth and coincides with a shift in SHH function
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE177520 | A stem cell roadmap of ribosome heterogeneity reveals a function for RPL10A in mesoderm production
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE184901 | Neuronal Dot1ll is a broad mitochondrial gene-repressor associated with human brain aging via H3K79 hypermethylation
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE185257 | Neuronal Dot1ll is a broad mitochondrial gene-repressor associated with human brain aging via H3K79 hypermethylation II
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE193573 | Analysis of transcriptomic transcriptomic consequences of Tyrobp deletion in a Huntington's disease mouse model
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE212183 | Single-cell transcriptomic profiling reveals a metabolic aspect of non-apoptosis in inherited retinal degeneration
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE191077 | Retinal pigment epithelium-specific CLIC4 mutant is a mouse model of dry age-related macular degeneration
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE109465 | RBX2 maintains final retinal cell position in a DAB1-dependent and -independent fashion
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE87038 | Single-cell RNA-seq analysis unveils a prevalent epithelial/mesenchymal hybrid state during mouse organogenesis
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE171422 | m6A mRNA modification is a rheostat to maintain colonic epithelial cell homeostasis [scRNA-seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE176063 | Systematic identification of cell fate regulatory programs using a single-cell atlas of mouse development
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE210521 | Single-cell transcriptomics uncovers a non-autonomous Tbx1-dependent genetic program controlling cardiac neural crest cell development
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE224647 | Cell-type specific vulnerability to Alzheimer's neurodegeneration in a subcortical limbic circuit node
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-GEOD-62917 | The RNA editing enzyme ADAR1 is a key regulatory of innate immune responses to RNA
Series Id: GSE62917
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE208147 | Molecular characterization of the intact muscle spindle using a multi-omics approach
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE64478 | Gene expression analysis of HdhQ111 mice in a Pin1 knock-out background
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE171421 | m6A mRNA modification is a rheostat to maintain colonic epithelial cell homeostasis [bulkRNA-seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE186411 | Hnrnpk is essential for embryonic limb bud development as a transcription activator and insulator collaborator
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE222923 | Kif2a operates as a gatekeeper of nociception in sensory neurons [RNA-seq - 3 months]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE227670 | The zebrafish heart harbors a thermogenic beige fat depot analog of human epicardial adipose tissue
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE233718 | The aging kidney is characterized by tubuloinflammaging, a phenotype associated with MHC-II gene expression
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE230108 | MultiomicsTracks96: A high throughput PIXUL-Matrix-based toolbox to profile frozen and FFPE tissues multiomics (RNA-Seq)
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE184921 | A Genome-Wide CRISPR Screen Identifies BRD4 as a Regulator of Cardiomyocyte Differentiation [in-vivo scRNA-seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-12757 | A piRNA pathway primed by individual transposons is linked to de novo DNA methylation in mice
Series Id: GSE12757
Experiment Type: RNA-Seq
Study Type: Baseline and WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE184920 | A Genome-Wide CRISPR Screen Identifies BRD4 as a Regulator of Cardiomyocyte Differentiation [in-vivo bulk RNA-seq]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE256431 | Spatiotemporal Landscape in Kidney of A Mouse Model of Hyperuricemia at Single-Cell Level [single-cell sequencing]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE156245 | Map3k2-regulated intestinal stromal cells define a distinct intestine stem cell niche for tissue repair
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE284051 | Early precursor-derived pituitary gland tissue-resident macrophages play a pivotal role in modulating hormonal balance [scRNA-Seq]
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE258959 | Spatiotemporal Landscape in Kidney of A Mouse Model of Hyperuricemia at Single-Cell Level [spatial transcriptomics data]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE271025 | Transcriptional profiling of piriform cortex from a mouse model of Huntington's disease (Q140)
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
E-GEOD-18396 | Transcription profiling by array of Dmrt1 knock out mice
Series Id: GSE18396
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-4523 | Transcription profiling of melanotransferrin knock out mice reveals differential expression of Mef2a, Tcf4, Gls and Apod in MTf -/- mice compared to MTf +/+ littermates, suggesting a role for MTf in proliferation and tumorigenesis
Series Id: GSE4523
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-MTAB-9248 | Impact of whole-body versus nose-only exposure systems on systemic, respiratory, and cardiovascular endpoints in a 2-month cigarette smoke exposure study in the ApoE-/- mouse model
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
GSE231599 | Isolated loss of the AUTS2 long isoform, brain-wide or targeted to Calbindin-lineage cells, generates a specific suite of brain, behavioral and molecular pathologies
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE166012 | Integrative genomic analysis of early neurogenesis reveals a temporal genetic program for differentiation and specification of preplate and Cajal-Retzius neurons [RNA-Seq]
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE225317 | Trophectoderm biopsies of blastocysts for preimplantation genetic testing following in vitro fertilization and embryo culture increases epigenetic dysregulation in a mouse model [RNA-seq]
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE166014 | Integrative genomic analysis of early neurogenesis reveals a temporal genetic program for differentiation and specification of preplate and Cajal-Retzius neurons [scRNA-Seq]
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
GSE150338 | Targeted single-cell RNA-seq identifies minority cell types of kidney distal nephron & A Comprehensive Map of mRNAs and Their Isoforms across All 14 Renal Tubule Segments of Mouse
 
Experiment Type: RNA-Seq
Study Type: Baseline
Source: GEO
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HT Experiment
E-GEOD-7430 | Transcription profiling of mouse pancreas at embryonic days 14.5 and 16.5 from animals lacking beta-catenin, a mediator of Wnt signaling and a component of the cadherin-catenin epithelial adhesion complex
Series Id: GSE7430
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-3565 | Transcription profiling of spleens from dual specificity phosphatase-1 (DUSP1) deficient and wild type mice to demonstrate a specific regulatory role of DUSP1 on a subset of LPS-induced genes that control the outcome of endotoxin shock
Series Id: GSE3565
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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HT Experiment
E-GEOD-47900 | Differential gene expression analysis in motor and sensory cortex as a result of experimental autoimmune encephalomyelitis (EAE), a neuroinflammatory model for Multiple sclerosis
Series Id: GSE47900
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
E-MTAB-1487 | Transcription profiling by array of mice overexpressing a transgenic mutant human TDP-43 (hTDP-43) gene and wild-type mice to study TDP-43 mutations in relation to amyotrophic lateral sclerosis
 
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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HT Experiment
GSE183206 | Single-cell RNA sequencing of the retina in a model of retinitis pigmentosa reveals early responses to degeneration in rods and cones
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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HT Experiment
GSE210700 | Metabolomic and transcriptomic profiling of adult mice and larval zebrafish leptin mutants reveal a common pattern of changes in metabolites and signaling pathways [Dataset 2]
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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