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Search results 201 to 300 out of 348 for Ctcf

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Category: Publication
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Type Details Score
Publication
33579945 | J:304621
First Author: Kaushal A
Year: 2021
Journal: Nat Commun
Title: CTCF loss has limited effects on global genome architecture in Drosophila despite critical regulatory functions.
Volume: 12
Issue: 1
Pages: 1011
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Publication
24990380 | J:323661
First Author: Kernohan KD
Year: 2014
Journal: Nucleic Acids Res
Title: Analysis of neonatal brain lacking ATRX or MeCP2 reveals changes in nucleosome density, CTCF binding and chromatin looping.
Volume: 42
Issue: 13
Pages: 8356-68
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Publication
30076197 | J:265214
First Author: Kleiman E
Year: 2018
Journal: J Immunol
Title: Cutting Edge: Proper Orientation of CTCF Sites in Cer Is Required for Normal Jκ-Distal and Jκ-Proximal Vκ Gene Usage.
Volume: 201
Issue: 6
Pages: 1633-1638
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Publication
29860503 | J:266289
First Author: Bergmaier P
Year: 2018
Journal: Nucleic Acids Res
Title: Choice of binding sites for CTCFL compared to CTCF is driven by chromatin and by sequence preference.
Volume: 46
Issue: 14
Pages: 7097-7107
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Publication
18219272 | J:131819
First Author: Stedman W
Year: 2008
Journal: EMBO J
Title: Cohesins localize with CTCF at the KSHV latency control region and at cellular c-myc and H19/Igf2 insulators.
Volume: 27
Issue: 4
Pages: 654-66
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Publication
19008940 | J:142393
First Author: Libby RT
Year: 2008
Journal: PLoS Genet
Title: CTCF cis-regulates trinucleotide repeat instability in an epigenetic manner: a novel basis for mutational hot spot determination.
Volume: 4
Issue: 11
Pages: e1000257
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Publication
22906166 | J:216572
First Author: Horakova AH
Year: 2012
Journal: Genome Biol
Title: The mouse DXZ4 homolog retains Ctcf binding and proximity to Pls3 despite substantial organizational differences compared to the primate macrosatellite.
Volume: 13
Issue: 8
Pages: R70
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Publication
20231363 | J:162590
First Author: Suzuki T
Year: 2010
Journal: Mol Cell Biol
Title: Expression of a testis-specific form of Gal3st1 (CST), a gene essential for spermatogenesis, is regulated by the CTCF paralogous gene BORIS.
Volume: 30
Issue: 10
Pages: 2473-84
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Publication
15684400 | J:333306
First Author: Garrett FE
Year: 2005
Journal: Mol Cell Biol
Title: Chromatin architecture near a potential 3' end of the igh locus involves modular regulation of histone modifications during B-Cell development and in vivo occupancy at CTCF sites.
Volume: 25
Issue: 4
Pages: 1511-25
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Publication
22415163 | J:332380
First Author: Guibert S
Year: 2012
Journal: Epigenetics
Title: CTCF-binding sites within the H19 ICR differentially regulate local chromatin structures and cis-acting functions.
Volume: 7
Issue: 4
Pages: 361-9
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Publication
28775169 | J:245654
First Author: Damaschke NA
Year: 2017
Journal: Cancer Res
Title: Loss of Igf2 Gene Imprinting in Murine Prostate Promotes Widespread Neoplastic Growth.
Volume: 77
Issue: 19
Pages: 5236-5247
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Publication
20427289 | J:348806
First Author: Bergström R
Year: 2010
Journal: J Biol Chem
Title: Transforming growth factor beta promotes complexes between Smad proteins and the CCCTC-binding factor on the H19 imprinting control region chromatin.
Volume: 285
Issue: 26
Pages: 19727-37
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Publication
37534534 | J:340808
First Author: Dai R
Year: 2023
Journal: Nucleic Acids Res
Title: Three-way contact analysis characterizes the higher order organization of the Tcra locus.
Volume: 51
Issue: 17
Pages: 8987-9000
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Publication
18237772 | -
First Author: Parelho V
Year: 2008
Journal: Cell
Title: Cohesins functionally associate with CTCF on mammalian chromosome arms.
Volume: 132
Issue: 3
Pages: 422-33
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Publication
21059229 | -
First Author: van de Nobelen S
Year: 2010
Journal: Epigenetics Chromatin
Title: CTCF regulates the local epigenetic state of ribosomal DNA repeats.
Volume: 3
Issue: 1
Pages: 19
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Publication
26589134 | J:227044
First Author: Berndt A
Year: 2016
Journal: Exp Mol Pathol
Title: Genetic determinants of fibro-osseous lesions in aged inbred mice.
Volume: 100
Issue: 1
Pages: 92-100
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Publication
15731405 | J:97083
First Author: Sakatani T
Year: 2005
Journal: Science
Title: Loss of imprinting of Igf2 alters intestinal maturation and tumorigenesis in mice.
Volume: 307
Issue: 5717
Pages: 1976-8
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Publication
34768809 | J:345415
 
First Author: Brinkmeyer-Langford C
Year: 2021
Journal: Int J Mol Sci
Title: Resilience in Long-Term Viral Infection: Genetic Determinants and Interactions.
Volume: 22
Issue: 21
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Publication
31491387 | -
First Author: Kaaij LJT
Year: 2019
Journal: Cell
Title: The ChAHP Complex Counteracts Chromatin Looping at CTCF Sites that Emerged from SINE Expansions in Mouse.
Volume: 178
Issue: 6
Pages: 1437-1451.e14
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Publication
24990148 | J:211399
First Author: Ideraabdullah FY
Year: 2014
Journal: Hum Mol Genet
Title: Tissue-specific insulator function at H19/Igf2 revealed by deletions at the imprinting control region.
Volume: 23
Issue: 23
Pages: 6246-59
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Publication
9201980 | -
First Author: Deissler H
Year: 1997
Journal: J Biol Chem
Title: Rapid protein sequencing by tandem mass spectrometry and cDNA cloning of p20-CGGBP. A novel protein that binds to the unstable triplet repeat 5'-d(CGG)n-3' in the human FMR1 gene.
Volume: 272
Issue: 27
Pages: 16761-8
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Publication
10692448 | -
First Author: Müller-Hartmann H
Year: 2000
Journal: J Biol Chem
Title: The human 20-kDa 5'-(CGG)(n)-3'-binding protein is targeted to the nucleus and affects the activity of the FMR1 promoter.
Volume: 275
Issue: 9
Pages: 6447-52
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Publication
26306647 | -
First Author: Goracci M
Year: 2016
Journal: Eur J Hum Genet
Title: Defining the role of the CGGBP1 protein in FMR1 gene expression.
Volume: 24
Issue: 5
Pages: 697-703
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Publication
25981527 | -
 
First Author: Agarwal P
Year: 2015
Journal: BMC Genomics
Title: CGGBP1 mitigates cytosine methylation at repetitive DNA sequences.
Volume: 16
Pages: 390
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Publication
26482656 | -
First Author: Singh U
Year: 2015
Journal: Ups J Med Sci
Title: CGGBP1--an indispensable protein with ubiquitous cytoprotective functions.
Volume: 120
Issue: 4
Pages: 219-32
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Publication
25483050 | -
First Author: Agarwal P
Year: 2016
Journal: Cell Cycle
Title: Growth signals employ CGGBP1 to suppress transcription of Alu-SINEs.
Volume: 15
Issue: 12
Pages: 1558-71
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Publication
24196442 | -
First Author: Singh U
Year: 2014
Journal: Cell Cycle
Title: CGGBP1 phosphorylation constitutes a telomere-protection signal.
Volume: 13
Issue: 1
Pages: 96-105
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Publication
36717694 | J:342647
First Author: Chakraborty S
Year: 2023
Journal: Nat Genet
Title: Enhancer-promoter interactions can bypass CTCF-mediated boundaries and contribute to phenotypic robustness.
Volume: 55
Issue: 2
Pages: 280-290
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Publication
22345664 | J:181838
First Author: Volpi SA
Year: 2012
Journal: J Immunol
Title: Germline deletion of Igh 3' regulatory region elements hs 5, 6, 7 (hs5-7) affects B cell-specific regulation, rearrangement, and insulation of the Igh locus.
Volume: 188
Issue: 6
Pages: 2556-66
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Publication
37672574 | J:342873
First Author: Liao J
Year: 2023
Journal: Sci Adv
Title: Establishment of paternal methylation imprint at the H19/Igf2 imprinting control region.
Volume: 9
Issue: 36
Pages: eadi2050
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39579767 | J:359453
First Author: Harke J
Year: 2024
Journal: Mol Cell
Title: Multiple allelic configurations govern long-range Shh enhancer-promoter communication in the embryonic forebrain.
Volume: 84
Issue: 24
Pages: 4698-4710.e6
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31147463 | J:276559
First Author: Paliou C
Year: 2019
Journal: Proc Natl Acad Sci U S A
Title: Preformed chromatin topology assists transcriptional robustness of Shh during limb development.
Volume: 116
Issue: 25
Pages: 12390-12399
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25403489 | J:224306
First Author: Puget N
Year: 2015
Journal: Mol Cell Biol
Title: Insertion of an imprinted insulator into the IgH locus reveals developmentally regulated, transcription-dependent control of V(D)J recombination.
Volume: 35
Issue: 3
Pages: 529-43
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Publication
31358994 | J:282642
First Author: Despang A
Year: 2019
Journal: Nat Genet
Title: Functional dissection of the Sox9-Kcnj2 locus identifies nonessential and instructive roles of TAD architecture.
Volume: 51
Issue: 8
Pages: 1263-1271
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21441452 | J:172855
First Author: Xiang Y
Year: 2011
Journal: J Immunol
Title: A multifunctional element in the mouse Igκ locus that specifies repertoire and Ig loci subnuclear location.
Volume: 186
Issue: 9
Pages: 5356-66
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Publication
39413158 | J:359652
First Author: Bruzeau C
Year: 2024
Journal: Nucleic Acids Res
Title: Core enhancers of the 3'RR optimize IgH nuclear position and loop conformation for successful oriented class switch recombination.
Volume: 52
Issue: 20
Pages: 12281-12294
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20062522 | J:156755
First Author: Han L
Year: 2010
Journal: PLoS Genet
Title: Postnatal survival of mice with maternal duplication of distal chromosome 7 induced by a Igf2/H19 imprinting control region lacking insulator function.
Volume: 6
Issue: 1
Pages: e1000803
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15273689 | J:91713
First Author: Murrell A
Year: 2004
Journal: Nat Genet
Title: Interaction between differentially methylated regions partitions the imprinted genes Igf2 and H19 into parent-specific chromatin loops.
Volume: 36
Issue: 8
Pages: 889-93
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33567274 | J:307414
First Author: Liao J
Year: 2021
Journal: Cell Rep
Title: Prenatal correction of IGF2 to rescue the growth phenotypes in mouse models of Beckwith-Wiedemann and Silver-Russell syndromes.
Volume: 34
Issue: 6
Pages: 108729
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Publication
28583252 | J:257088
   
First Author: Dave K
Year: 2017
Journal: Elife
Title: Mice deficient of Myc super-enhancer region reveal differential control mechanism between normal and pathological growth.
Volume: 6
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23296705 | J:193015
First Author: Xiang Y
Year: 2013
Journal: J Immunol
Title: Vκ gene repertoire and locus contraction are specified by critical DNase I hypersensitive sites within the Vκ-Jκ intervening region.
Volume: 190
Issue: 4
Pages: 1819-26
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Publication
35831950 | J:333875
 
First Author: Bian F
Year: 2022
Journal: Development
Title: Functional analysis of the Vsx2 super-enhancer uncovers distinct cis-regulatory circuits controlling Vsx2 expression during retinogenesis.
Volume: 149
Issue: 15
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26091879 | J:223744
First Author: Chen K
Year: 2015
Journal: Proc Natl Acad Sci U S A
Title: Genome-wide binding and mechanistic analyses of Smchd1-mediated epigenetic regulation.
Volume: 112
Issue: 27
Pages: E3535-44
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26302788 | J:226321
First Author: Gerasimova T
Year: 2015
Journal: Genes Dev
Title: A structural hierarchy mediated by multiple nuclear factors establishes IgH locus conformation.
Volume: 29
Issue: 16
Pages: 1683-95
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Publication
37399024 | J:339562
 
First Author: Michelson DA
Year: 2023
Journal: J Exp Med
Title: Hnf4 activates mimetic-cell enhancers to recapitulate gut and liver development within the thymus.
Volume: 220
Issue: 10
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16575185 | J:108131
First Author: Hagège H
Year: 2006
Journal: Cytogenet Genome Res
Title: The 3' portion of the mouse H19 Imprinting-Control Region is required for proper tissue-specific expression of the Igf2 gene.
Volume: 113
Issue: 1-4
Pages: 230-7
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21349430 | J:168973
First Author: Ebert A
Year: 2011
Journal: Immunity
Title: The distal V(H) gene cluster of the Igh locus contains distinct regulatory elements with Pax5 transcription factor-dependent activity in pro-B cells.
Volume: 34
Issue: 2
Pages: 175-87
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36413948 | J:331694
First Author: Liang Q
Year: 2022
Journal: Dev Cell
Title: Essential role of MESP1-RING1A complex in cardiac differentiation.
Volume: 57
Issue: 22
Pages: 2533-2549.e7
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27941786 | J:260180
First Author: Herzig Y
Year: 2017
Journal: Nat Immunol
Title: Transcriptional programs that control expression of the autoimmune regulator gene Aire.
Volume: 18
Issue: 2
Pages: 161-172
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26140606 | J:224847
First Author: Hiler D
Year: 2015
Journal: Cell Stem Cell
Title: Quantification of Retinogenesis in 3D Cultures Reveals Epigenetic Memory and Higher Efficiency in iPSCs Derived from Rod Photoreceptors.
Volume: 17
Issue: 1
Pages: 101-15
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21871842 | J:178343
First Author: Essafi A
Year: 2011
Journal: Dev Cell
Title: A wt1-controlled chromatin switching mechanism underpins tissue-specific wnt4 activation and repression.
Volume: 21
Issue: 3
Pages: 559-74
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33526923 | J:302856
First Author: Laffleur B
Year: 2021
Journal: Nat Genet
Title: Noncoding RNA processing by DIS3 regulates chromosomal architecture and somatic hypermutation in B cells.
Volume: 53
Issue: 2
Pages: 230-242
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37263273 | J:342767
First Author: Chandra A
Year: 2023
Journal: Immunity
Title: Quantitative control of Ets1 dosage by a multi-enhancer hub promotes Th1 cell differentiation and protects from allergic inflammation.
Volume: 56
Issue: 7
Pages: 1451-1467.e12
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30955885 | J:286016
First Author: Canzio D
Year: 2019
Journal: Cell
Title: Antisense lncRNA Transcription Mediates DNA Demethylation to Drive Stochastic Protocadherin α Promoter Choice.
Volume: 177
Issue: 3
Pages: 639-653.e15
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35726060 | J:350412
First Author: Wang W
Year: 2022
Journal: Nat Immunol
Title: TCF-1 promotes chromatin interactions across topologically associating domains in T cell progenitors.
Volume: 23
Issue: 7
Pages: 1052-1062
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21949399 | J:177466
First Author: Kehayova P
Year: 2011
Journal: Proc Natl Acad Sci U S A
Title: Regulatory elements required for the activation and repression of the protocadherin-alpha gene cluster.
Volume: 108
Issue: 41
Pages: 17195-200
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37995656 | J:343294
First Author: Hu Y
Year: 2023
Journal: Cell
Title: Lineage-specific 3D genome organization is assembled at multiple scales by IKAROS.
Volume: 186
Issue: 24
Pages: 5269-5289.e22
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36376298 | J:346914
First Author: Zelenka T
Year: 2022
Journal: Nat Commun
Title: The 3D enhancer network of the developing T cell genome is shaped by SATB1.
Volume: 13
Issue: 1
Pages: 6954
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27662091 | J:253610
First Author: Liu XS
Year: 2016
Journal: Cell
Title: Editing DNA Methylation in the Mammalian Genome.
Volume: 167
Issue: 1
Pages: 233-247.e17
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29576529 | J:262040
First Author: Qiu X
Year: 2018
Journal: Mol Cell
Title: Sequential Enhancer Sequestration Dysregulates Recombination Center Formation at the IgH Locus.
Volume: 70
Issue: 1
Pages: 21-33.e6
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32301703 | J:356099
   
First Author: Amândio AR
Year: 2020
Journal: Elife
Title: A complex regulatory landscape involved in the development of mammalian external genitals.
Volume: 9
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33247132 | J:299861
First Author: Fang H
Year: 2020
Journal: Nat Commun
Title: Trans- and cis-acting effects of Firre on epigenetic features of the inactive X chromosome.
Volume: 11
Issue: 1
Pages: 6053
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38509385 | J:347410
First Author: Chen Z
Year: 2024
Journal: Nat Genet
Title: Increased enhancer-promoter interactions during developmental enhancer activation in mammals.
Volume: 56
Issue: 4
Pages: 675-685
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28262505 | J:251939
First Author: Cheung KL
Year: 2017
Journal: Mol Cell
Title: Distinct Roles of Brd2 and Brd4 in Potentiating the Transcriptional Program for Th17 Cell Differentiation.
Volume: 65
Issue: 6
Pages: 1068-1080.e5
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18587395 | J:138566
First Author: Smits G
Year: 2008
Journal: Nat Genet
Title: Conservation of the H19 noncoding RNA and H19-IGF2 imprinting mechanism in therians.
Volume: 40
Issue: 8
Pages: 971-6
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23064439 | J:190712
First Author: Lin YC
Year: 2012
Journal: Nat Immunol
Title: Global changes in the nuclear positioning of genes and intra- and interdomain genomic interactions that orchestrate B cell fate.
Volume: 13
Issue: 12
Pages: 1196-204
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26702099 | J:231546
First Author: Park HJ
Year: 2016
Journal: EMBO J
Title: Cytokine-induced megakaryocytic differentiation is regulated by genome-wide loss of a uSTAT transcriptional program.
Volume: 35
Issue: 6
Pages: 580-94
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28938112 | J:247699
First Author: Isoda T
Year: 2017
Journal: Cell
Title: Non-coding Transcription Instructs Chromatin Folding and Compartmentalization to Dictate Enhancer-Promoter Communication and T Cell Fate.
Volume: 171
Issue: 1
Pages: 103-119.e18
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19141594 | J:268863
First Author: Kim JH
Year: 2009
Journal: Genome Res
Title: Human gamma-satellite DNA maintains open chromatin structure and protects a transgene from epigenetic silencing.
Volume: 19
Issue: 4
Pages: 533-44
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32690881 | J:296631
First Author: Fang C
Year: 2020
Journal: Leukemia
Title: Determinants and role of chromatin organization in acute leukemia.
Volume: 34
Issue: 10
Pages: 2561-2575
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35817979 | J:330443
First Author: Anania C
Year: 2022
Journal: Nat Genet
Title: In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulation.
Volume: 54
Issue: 7
Pages: 1026-1036
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36108632 | J:329940
First Author: Juan AM
Year: 2022
Journal: Mol Cell
Title: Tissue-specific Grb10/Ddc insulator drives allelic architecture for cardiac development.
Volume: 82
Issue: 19
Pages: 3613-3631.e7
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39173638 | J:353996
First Author: Ortabozkoyun H
Year: 2024
Journal: Mol Cell
Title: Members of an array of zinc-finger proteins specify distinct Hox chromatin boundaries.
Volume: 84
Issue: 18
Pages: 3406-3422.e6
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37494934 | J:339308
First Author: Rahme GJ
Year: 2023
Journal: Cell
Title: Modeling epigenetic lesions that cause gliomas.
Volume: 186
Issue: 17
Pages: 3674-3685.e14
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37939182 | J:342398
First Author: Chatzinikolaou G
Year: 2023
Journal: Sci Adv
Title: XPF interacts with TOP2B for R-loop processing and DNA looping on actively transcribed genes.
Volume: 9
Issue: 45
Pages: eadi2095
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Publication
38062027 | J:359679
First Author: Okhovat M
Year: 2023
Journal: Nat Commun
Title: TAD evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function.
Volume: 14
Issue: 1
Pages: 8111
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Publication
24291638 | J:210031
First Author: Bersten DC
Year: 2014
Journal: Biochim Biophys Acta
Title: Regulation of the neuronal transcription factor NPAS4 by REST and microRNAs.
Volume: 1839
Issue: 1
Pages: 13-24
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12595547 | J:82230
First Author: Hikichi T
Year: 2003
Journal: Nucleic Acids Res
Title: Imprinting regulation of the murine Meg1/Grb10 and human GRB10 genes; roles of brain-specific promoters and mouse-specific CTCF-binding sites.
Volume: 31
Issue: 5
Pages: 1398-406
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16449639 | J:105567
First Author: Thorvaldsen JL
Year: 2006
Journal: Mol Cell Biol
Title: Developmental profile of H19 differentially methylated domain (DMD) deletion alleles reveals multiple roles of the DMD in regulating allelic expression and DNA methylation at the imprinted H19/Igf2 locus.
Volume: 26
Issue: 4
Pages: 1245-58
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Publication
30980800 | J:277219
First Author: Fertan E
Year: 2019
Journal: Am J Pathol
Title: Cognitive Decline, Cerebral-Spleen Tryptophan Metabolism, Oxidative Stress, Cytokine Production, and Regulation of the Txnip Gene in a Triple Transgenic Mouse Model of Alzheimer Disease.
Volume: 189
Issue: 7
Pages: 1435-1450
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Publication
30940539 | J:276571
First Author: Rajderkar S
Year: 2019
Journal: Dev Biol
Title: Trim33 is required for appropriate development of pre-cardiogenic mesoderm.
Volume: 450
Issue: 2
Pages: 101-114
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Publication
33863790 | J:320461
First Author: Majumder P
Year: 2021
Journal: J Immunol
Title: The Murine MHC Class II Super Enhancer IA/IE-SE Contains a Functionally Redundant CTCF-Binding Component and a Novel Element Critical for Maximal Expression.
Volume: 206
Issue: 9
Pages: 2221-2232
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Publication
38808662 | J:350922
First Author: Feng J
Year: 2024
Journal: Nucleic Acids Res
Title: PHF2 regulates genome topology and DNA replication in neural stem cells via cohesin.
Volume: 52
Issue: 12
Pages: 7063-7080
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Publication
28963035 | J:248834
First Author: Chowdhary V
Year: 2017
Journal: Am J Pathol
Title: miRNA-122 Protects Mice and Human Hepatocytes from Acetaminophen Toxicity by Regulating Cytochrome P450 Family 1 Subfamily A Member 2 and Family 2 Subfamily E Member 1 Expression.
Volume: 187
Issue: 12
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