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Search results 301 to 348 out of 348 for Ctcf

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Category: Publication
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Type Details Score
Publication
17932037 | J:129028
First Author: Abhyankar MM
Year: 2007
Journal: J Biol Chem
Title: A novel CpG-free vertebrate insulator silences the testis-specific SP-10 gene in somatic tissues: role for TDP-43 in insulator function.
Volume: 282
Issue: 50
Pages: 36143-54
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Publication
18701505 | J:139141
First Author: Fu VX
Year: 2008
Journal: Cancer Res
Title: Aging and cancer-related loss of insulin-like growth factor 2 imprinting in the mouse and human prostate.
Volume: 68
Issue: 16
Pages: 6797-802
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Publication
17617601 | J:149398
First Author: Gomos-Klein J
Year: 2007
Journal: J Immunol
Title: CTCF-independent, but not CTCF-dependent, elements significantly contribute to TCR-alpha locus control region activity.
Volume: 179
Issue: 2
Pages: 1088-95
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Publication
21324874 | J:169131
First Author: Román AC
Year: 2011
Journal: Genome Res
Title: Dioxin receptor and SLUG transcription factors regulate the insulator activity of B1 SINE retrotransposons via an RNA polymerase switch.
Volume: 21
Issue: 3
Pages: 422-32
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Publication
21502535 | J:172215
First Author: Kim YJ
Year: 2011
Journal: Proc Natl Acad Sci U S A
Title: Conserved, developmentally regulated mechanism couples chromosomal looping and heterochromatin barrier activity at the homeobox gene A locus.
Volume: 108
Issue: 18
Pages: 7391-6
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Publication
20693536 | J:173822
First Author: Singh P
Year: 2010
Journal: Nucleic Acids Res
Title: Coordinated allele-specific histone acetylation at the differentially methylated regions of imprinted genes.
Volume: 38
Issue: 22
Pages: 7974-90
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Publication
24558376 | J:213352
First Author: Yang B
Year: 2014
Journal: PLoS One
Title: A novel pathway links oxidative stress to loss of insulin growth factor-2 (IGF2) imprinting through NF-κB activation.
Volume: 9
Issue: 2
Pages: e88052
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Publication
24603501 | J:226663
First Author: Lake RJ
Year: 2014
Journal: PLoS Genet
Title: RBPJ, the major transcriptional effector of Notch signaling, remains associated with chromatin throughout mitosis, suggesting a role in mitotic bookmarking.
Volume: 10
Issue: 3
Pages: e1004204
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Publication
28103242 | J:238697
First Author: Jerković I
Year: 2017
Journal: PLoS Genet
Title: Genome-Wide Binding of Posterior HOXA/D Transcription Factors Reveals Subgrouping and Association with CTCF.
Volume: 13
Issue: 1
Pages: e1006567
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Publication
28671686 | J:259358
First Author: Jiang Y
Year: 2017
Journal: Nat Genet
Title: The methyltransferase SETDB1 regulates a large neuron-specific topological chromatin domain.
Volume: 49
Issue: 8
Pages: 1239-1250
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Publication
24647628 | J:277002
 
First Author: Nguyen C
Year: 2014
Journal: Database (Oxford)
Title: Comparison of sequence variants in transcriptomic control regions across 17 mouse genomes.
Volume: 2014
Pages: bau020
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Publication
25512470 | J:301508
First Author: Majumder K
Year: 2015
Journal: J Exp Med
Title: Lineage-specific compaction of Tcrb requires a chromatin barrier to protect the function of a long-range tethering element.
Volume: 212
Issue: 1
Pages: 107-20
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Publication
30742094 | J:282883
First Author: Kraft K
Year: 2019
Journal: Nat Cell Biol
Title: Serial genomic inversions induce tissue-specific architectural stripes, gene misexpression and congenital malformations.
Volume: 21
Issue: 3
Pages: 305-310
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Publication
31209053 | J:277177
First Author: Darbellay F
Year: 2019
Journal: Proc Natl Acad Sci U S A
Title: The constrained architecture of mammalian Hox gene clusters.
Volume: 116
Issue: 27
Pages: 13424-13433
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Publication
31511252 | J:284117
 
First Author: Williamson I
Year: 2019
Journal: Development
Title: Developmentally regulated Shh expression is robust to TAD perturbations.
Volume: 146
Issue: 19
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Publication
31533351 | J:303395
 
First Author: Ohneda K
Year: 2019
Journal: Int J Mol Sci
Title: Mouse Tryptase Gene Expression is Coordinately Regulated by GATA1 and GATA2 in Bone Marrow-Derived Mast Cells.
Volume: 20
Issue: 18
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Publication
33229569 | J:299264
First Author: Rodríguez-Carballo E
Year: 2020
Journal: Proc Natl Acad Sci U S A
Title: Chromatin topology and the timing of enhancer function at the HoxD locus.
Volume: 117
Issue: 49
Pages: 31231-31241
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Publication
32439634 | J:300511
First Author: Boyle S
Year: 2020
Journal: Genes Dev
Title: A central role for canonical PRC1 in shaping the 3D nuclear landscape.
Volume: 34
Issue: 13-14
Pages: 931-949
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Publication
34292939 | J:308529
First Author: Willemin A
Year: 2021
Journal: PLoS Genet
Title: Induction of a chromatin boundary in vivo upon insertion of a TAD border.
Volume: 17
Issue: 7
Pages: e1009691
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Publication
29563166 | J:357099
First Author: Thybert D
Year: 2018
Journal: Genome Res
Title: Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes.
Volume: 28
Issue: 4
Pages: 448-459
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Publication
33836591 | J:303260
 
First Author: Park YJ
Year: 2021
Journal: Proc Natl Acad Sci U S A
Title: DNMT1 maintains metabolic fitness of adipocytes through acting as an epigenetic safeguard of mitochondrial dynamics.
Volume: 118
Issue: 11
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Publication
23230275 | J:315502
First Author: Okamura E
Year: 2013
Journal: Mol Cell Biol
Title: The H19 imprinting control region mediates preimplantation imprinted methylation of nearby sequences in yeast artificial chromosome transgenic mice.
Volume: 33
Issue: 4
Pages: 858-71
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Publication
23898036 | J:357137
First Author: Choi NM
Year: 2013
Journal: J Immunol
Title: Deep sequencing of the murine IgH repertoire reveals complex regulation of nonrandom V gene rearrangement frequencies.
Volume: 191
Issue: 5
Pages: 2393-402
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Publication
37345883 | J:344715
First Author: Kayyar B
Year: 2023
Journal: Reproduction
Title: Molecular functions of Mrhl lncRNA in mouse spermatogenesis.
Volume: 166
Issue: 3
Pages: R39-R50
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Publication
35412350 | J:345509
First Author: Kayyar B
Year: 2022
Journal: Mol Cell Biol
Title: Regulation of Sox8 through lncRNA Mrhl-Mediated Chromatin Looping in Mouse Spermatogonia.
Volume: 42
Issue: 5
Pages: e0047521
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Publication
38643172 | J:360866
First Author: Baudic M
Year: 2024
Journal: Nat Commun
Title: TAD boundary deletion causes PITX2-related cardiac electrical and structural defects.
Volume: 15
Issue: 1
Pages: 3380
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Publication
39499640 | J:358586
First Author: Lopez-Delisle L
Year: 2024
Journal: Proc Natl Acad Sci U S A
Title: CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length.
Volume: 121
Issue: 46
Pages: e2414865121
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Publication
26248554 | J:355972
 
First Author: Deng X
Year: 2015
Journal: Genome Biol
Title: Bipartite structure of the inactive mouse X chromosome.
Volume: 16
Pages: 152
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Publication
28784160 | J:356057
First Author: Fabre PJ
Year: 2017
Journal: Genome Biol
Title: Large scale genomic reorganization of topological domains at the HoxD locus.
Volume: 18
Issue: 1
Pages: 149
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Publication
37081156 | J:335096
First Author: Rajderkar S
Year: 2023
Journal: Commun Biol
Title: Topologically associating domain boundaries are required for normal genome function.
Volume: 6
Issue: 1
Pages: 435
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Publication
29377931 | J:264647
First Author: O'Brien LL
Year: 2018
Journal: PLoS Genet
Title: Transcriptional regulatory control of mammalian nephron progenitors revealed by multi-factor cistromic analysis and genetic studies.
Volume: 14
Issue: 1
Pages: e1007181
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Publication
28715449 | J:244454
First Author: Herdman C
Year: 2017
Journal: PLoS Genet
Title: A unique enhancer boundary complex on the mouse ribosomal RNA genes persists after loss of Rrn3 or UBF and the inactivation of RNA polymerase I transcription.
Volume: 13
Issue: 7
Pages: e1006899
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Publication
11909940 | J:106218
First Author: Thorvaldsen JL
Year: 2002
Journal: Mol Cell Biol
Title: Analysis of sequence upstream of the endogenous H19 gene reveals elements both essential and dispensable for imprinting.
Volume: 22
Issue: 8
Pages: 2450-62
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Publication
31937365 | J:303109
First Author: Matsuzaki H
Year: 2020
Journal: Epigenetics Chromatin
Title: Recapitulation of gametic DNA methylation and its post-fertilization maintenance with reassembled DNA elements at the mouse Igf2/H19 locus.
Volume: 13
Issue: 1
Pages: 2
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Publication
20838620 | J:308568
First Author: Lee DH
Year: 2010
Journal: PLoS One
Title: Complete biallelic insulation at the H19/Igf2 imprinting control region position results in fetal growth retardation and perinatal lethality.
Volume: 5
Issue: 9
Pages: e12630
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Publication
23821645 | J:202262
First Author: Sakaguchi R
Year: 2013
Journal: Hum Mol Genet
Title: Sox-Oct motifs contribute to maintenance of the unmethylated H19 ICR in YAC transgenic mice.
Volume: 22
Issue: 22
Pages: 4627-37
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Publication
12527297 | J:81486
First Author: Davey C
Year: 2003
Journal: J Mol Biol
Title: Nucleosome positioning signals in the DNA sequence of the human and mouse H19 imprinting control regions.
Volume: 325
Issue: 5
Pages: 873-87
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Publication
12538357 | J:81624
First Author: Tam AS
Year: 2003
Journal: Carcinogenesis
Title: Perturbations of the Ink4a/Arf gene locus in aflatoxin B1-induced mouse lung tumors.
Volume: 24
Issue: 1
Pages: 121-32
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Publication
18682388 | J:142312
First Author: Murai J
Year: 2008
Journal: J Biol Chem
Title: Insulation of the ubiquitous Rxrb promoter from the cartilage-specific adjacent gene, Col11a2.
Volume: 283
Issue: 41
Pages: 27677-87
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Publication
30763343 | J:273356
First Author: Tanimoto K
Year: 2019
Journal: PLoS One
Title: Transvection-like interchromosomal interaction is not observed at the transcriptional level when tested in the Rosa26 locus in mouse.
Volume: 14
Issue: 2
Pages: e0203099
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Publication
39372737 | J:360883
     
First Author: Chakraborty S
Year: 2024
Journal: bioRxiv
Title: Structural perturbation of chromatin domains with multiple developmental regulators can severely impact gene regulation and development.
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Publication
29958543 | J:361607
First Author: Matsuzaki H
Year: 2018
Journal: Epigenetics Chromatin
Title: Synthetic DNA fragments bearing ICR cis elements become differentially methylated and recapitulate genomic imprinting in transgenic mice.
Volume: 11
Issue: 1
Pages: 36
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Publication
38643244 | J:361553
First Author: Camerino M
Year: 2024
Journal: Epigenetics Chromatin
Title: Analysis of long-range chromatin contacts, compartments and looping between mouse embryonic stem cells, lens epithelium and lens fibers.
Volume: 17
Issue: 1
Pages: 10
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Publication
23973221 | J:208226
First Author: Medvedovic J
Year: 2013
Journal: Immunity
Title: Flexible long-range loops in the VH gene region of the Igh locus facilitate the generation of a diverse antibody repertoire.
Volume: 39
Issue: 2
Pages: 229-44
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Publication
- | J:332469
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2023
Title: PAR markers in MGI.
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
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Publication
- | J:321631
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2022
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Regulatory Build.
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