|  Help  |  About  |  Contact Us

Search our database by keyword

- or -

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 1 to 62 out of 62 for Vps39

Category restricted to Publication (x)

0.043s

Categories

Category: Publication
« show all
Type Details Score
Publication
20961651 | J:312182
First Author: Messler S
Year: 2011
Journal: Immunobiology
Title: The TGF-β signaling modulators TRAP1/TGFBRAP1 and VPS39/Vam6/TLP are essential for early embryonic development.
Volume: 216
Issue: 3
Pages: 343-50
•
•
•
•
•
Publication
33893273 | J:312146
First Author: Davegårdh C
Year: 2021
Journal: Nat Commun
Title: VPS39-deficiency observed in type 2 diabetes impairs muscle stem cell differentiation via altered autophagy and epigenetics.
Volume: 12
Issue: 1
Pages: 2431
•
•
•
•
•
Publication
15110766 | J:89377
First Author: Brahmaraju M
Year: 2004
Journal: Biochem Biophys Res Commun
Title: Spatio-temporal organization of Vam6P and SNAP on mouse spermatozoa and their involvement in sperm-zona pellucida interactions.
Volume: 318
Issue: 1
Pages: 148-55
•
•
•
•
•
Publication
11936273 | J:76190
First Author: Falcón-Pérez JM
Year: 2002
Journal: Pigment Cell Res
Title: The pallidin (Pldn) gene and the role of SNARE proteins in melanosome biogenesis.
Volume: 15
Issue: 2
Pages: 82-6
•
•
•
•
•
Publication
21411634 | J:222677
First Author: Zlatic SA
Year: 2011
Journal: Mol Biol Cell
Title: Clathrin-dependent mechanisms modulate the subcellular distribution of class C Vps/HOPS tether subunits in polarized and nonpolarized cells.
Volume: 22
Issue: 10
Pages: 1699-715
•
•
•
•
•
Publication
19109425 | J:159132
First Author: Zhu GD
Year: 2009
Journal: Mol Biol Cell
Title: SPE-39 family proteins interact with the HOPS complex and function in lysosomal delivery.
Volume: 20
Issue: 4
Pages: 1223-40
•
•
•
•
•
Publication
19010779 | J:145883
First Author: Salazar G
Year: 2009
Journal: J Biol Chem
Title: Hermansky-Pudlak syndrome protein complexes associate with phosphatidylinositol 4-kinase type II alpha in neuronal and non-neuronal cells.
Volume: 284
Issue: 3
Pages: 1790-802
•
•
•
•
•
Publication
14668490 | J:90042
First Author: Richardson SC
Year: 2004
Journal: Mol Biol Cell
Title: Mammalian late vacuole protein sorting orthologues participate in early endosomal fusion and interact with the cytoskeleton.
Volume: 15
Issue: 3
Pages: 1197-210
•
•
•
•
•
Publication
- | J:204739
     
First Author: International Knockout Mouse Consortium
Year: 2014
Journal: Database Download
Title: MGI download of modified allele data from IKMC and creation of new knockout alleles
•
•
•
•
•
Publication
- | J:66660
       
First Author: Mouse Genome Database and National Center for Biotechnology Information Editorial Staff Collaboration
Year: 2001
Title: LocusLink Collaboration
•
•
•
•
•
Publication
- | J:204812
     
First Author: International Mouse Strain Resource
Year: 2014
Journal: Database Download
Title: MGI download of germline transmission data for alleles from IMSR strain data
•
•
•
•
•
Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
•
•
•
•
•
Publication
38355793 | J:345621
First Author: Adams DJ
Year: 2024
Journal: Nature
Title: Genetic determinants of micronucleus formation in vivo.
Volume: 627
Issue: 8002
Pages: 130-136
•
•
•
•
•
Publication
24194600 | J:228563
First Author: Koscielny G
Year: 2014
Journal: Nucleic Acids Res
Title: The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Volume: 42
Issue: Database issue
Pages: D802-9
•
•
•
•
•
Publication
34321999 | J:313619
 
First Author: Bedogni F
Year: 2021
Journal: Front Mol Neurosci
Title: Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development.
Volume: 14
Pages: 686034
•
•
•
•
•
Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
•
•
•
•
•
Publication
- | J:72247
       
First Author: DDB, FB, MGI, GOA, ZFIN curators
Year: 2001
Title: Gene Ontology annotation through association of InterPro records with GO terms
•
•
•
•
•
Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
•
•
•
•
•
Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
•
•
•
•
•
Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
•
•
•
•
•
Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
•
•
•
•
•
Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
•
•
•
•
•
Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
•
•
•
•
•
Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
•
•
•
•
•
Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
•
•
•
•
•
Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
•
•
•
•
•
Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
•
•
•
•
•
Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
•
•
•
•
•
Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
•
•
•
•
•
Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
•
•
•
•
•
Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
•
•
•
•
•
Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
•
•
•
•
•
Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
•
•
•
•
•
Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
•
•
•
•
•
Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
•
•
•
•
•
Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
•
•
•
•
•
Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
•
•
•
•
•
Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
•
•
•
•
•
Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
•
•
•
•
•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
•
•
•
•
•
Publication
20363736 | -
First Author: Peralta ER
Year: 2010
Journal: J Biol Chem
Title: Differential effects of TBC1D15 and mammalian Vps39 on Rab7 activation state, lysosomal morphology, and growth factor dependence.
Volume: 285
Issue: 22
Pages: 16814-21
•
•
•
•
•
Publication
1493335 | -
First Author: Raymond CK
Year: 1992
Journal: Mol Biol Cell
Title: Morphological classification of the yeast vacuolar protein sorting mutants: evidence for a prevacuolar compartment in class E vps mutants.
Volume: 3
Issue: 12
Pages: 1389-402
•
•
•
•
•
Publication
11062257 | -
First Author: Wurmser AE
Year: 2000
Journal: J Cell Biol
Title: New component of the vacuolar class C-Vps complex couples nucleotide exchange on the Ypt7 GTPase to SNARE-dependent docking and fusion.
Volume: 151
Issue: 3
Pages: 551-62
•
•
•
•
•
Publication
9545258 | -
First Author: Charng MJ
Year: 1998
Journal: J Biol Chem
Title: A novel protein distinguishes between quiescent and activated forms of the type I transforming growth factor beta receptor.
Volume: 273
Issue: 16
Pages: 9365-8
•
•
•
•
•
Publication
11278302 | -
First Author: Wurthner JU
Year: 2001
Journal: J Biol Chem
Title: Transforming growth factor-beta receptor-associated protein 1 is a Smad4 chaperone.
Volume: 276
Issue: 22
Pages: 19495-502
•
•
•
•
•
Publication
25266290 | J:222663
First Author: Perini ED
Year: 2014
Journal: Traffic
Title: Mammalian CORVET is required for fusion and conversion of distinct early endosome subpopulations.
Volume: 15
Issue: 12
Pages: 1366-89
•
•
•
•
•
Publication
19748353 | -
First Author: Binda M
Year: 2009
Journal: Mol Cell
Title: The Vam6 GEF controls TORC1 by activating the EGO complex.
Volume: 35
Issue: 5
Pages: 563-73
•
•
•
•
•
Publication
23167963 | -
First Author: Pols MS
Year: 2013
Journal: Traffic
Title: The HOPS proteins hVps41 and hVps39 are required for homotypic and heterotypic late endosome fusion.
Volume: 14
Issue: 2
Pages: 219-32
•
•
•
•
•
Publication
19748348 | -
First Author: Li L
Year: 2009
Journal: Mol Cell
Title: Amino acid signaling to TOR activation: Vam6 functioning as a Gtr1 GEF.
Volume: 35
Issue: 5
Pages: 543-5
•
•
•
•
•
Publication
9111041 | -
First Author: Nakamura N
Year: 1997
Journal: J Biol Chem
Title: Vam2/Vps41p and Vam6/Vps39p are components of a protein complex on the vacuolar membranes and involved in the vacuolar assembly in the yeast Saccharomyces cerevisiae.
Volume: 272
Issue: 17
Pages: 11344-9
•
•
•
•
•
Publication
33157038 | J:302472
First Author: Ghosh S
Year: 2020
Journal: Cell
Title: β-Coronaviruses Use Lysosomes for Egress Instead of the Biosynthetic Secretory Pathway.
Volume: 183
Issue: 6
Pages: 1520-1535.e14
•
•
•
•
•
Publication
16014971 | -
First Author: Tan YJ
Year: 2005
Journal: J Virol
Title: The severe acute respiratory syndrome coronavirus 3a protein up-regulates expression of fibrinogen in lung epithelial cells.
Volume: 79
Issue: 15
Pages: 10083-7
•
•
•
•
•
Publication
16474139 | -
First Author: Oostra M
Year: 2006
Journal: J Virol
Title: Glycosylation of the severe acute respiratory syndrome coronavirus triple-spanning membrane proteins 3a and M.
Volume: 80
Issue: 5
Pages: 2326-36
•
•
•
•
•
Publication
16894145 | -
First Author: Lu W
Year: 2006
Journal: Proc Natl Acad Sci U S A
Title: Severe acute respiratory syndrome-associated coronavirus 3a protein forms an ion channel and modulates virus release.
Volume: 103
Issue: 33
Pages: 12540-5
•
•
•
•
•
Publication
15135062 | -
First Author: Yu CJ
Year: 2004
Journal: FEBS Lett
Title: Identification of a novel protein 3a from severe acute respiratory syndrome coronavirus.
Volume: 565
Issue: 1-3
Pages: 111-6
•
•
•
•
•
Publication
15781262 | -
First Author: Shen S
Year: 2005
Journal: Biochem Biophys Res Commun
Title: The severe acute respiratory syndrome coronavirus 3a is a novel structural protein.
Volume: 330
Issue: 1
Pages: 286-92
•
•
•
•
•
Publication
20020050 | -
First Author: Minakshi R
Year: 2009
Journal: PLoS One
Title: The SARS Coronavirus 3a protein causes endoplasmic reticulum stress and induces ligand-independent downregulation of the type 1 interferon receptor.
Volume: 4
Issue: 12
Pages: e8342
•
•
•
•
•
Publication
31034780 | -
First Author: Siu KL
Year: 2019
Journal: FASEB J
Title: Severe acute respiratory syndrome coronavirus ORF3a protein activates the NLRP3 inflammasome by promoting TRAF3-dependent ubiquitination of ASC.
Volume: 33
Issue: 8
Pages: 8865-8877
•
•
•
•
•
Publication
32156572 | -
 
First Author: Farag NS
Year: 2020
Journal: Int J Biochem Cell Biol
Title: Viroporins and inflammasomes: A key to understand virus-induced inflammation.
Volume: 122
Pages: 105738
•
•
•
•
•
Publication
33422265 | -
First Author: Miao G
Year: 2021
Journal: Dev Cell
Title: ORF3a of the COVID-19 virus SARS-CoV-2 blocks HOPS complex-mediated assembly of the SNARE complex required for autolysosome formation.
Volume: 56
Issue: 4
Pages: 427-442.e5
•
•
•
•
•
Publication
34158638 | -
First Author: Kern DM
Year: 2021
Journal: Nat Struct Mol Biol
Title: Cryo-EM structure of SARS-CoV-2 ORF3a in lipid nanodiscs.
Volume: 28
Issue: 7
Pages: 573-582
•
•
•
•
•
Publication
11448994 | -
First Author: Caplan S
Year: 2001
Journal: J Cell Biol
Title: Human Vam6p promotes lysosome clustering and fusion in vivo.
Volume: 154
Issue: 1
Pages: 109-22
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom