Type |
Details |
Score |
Publication |
First Author: |
Veltel S |
Year: |
2008 |
Journal: |
FEBS Lett |
Title: |
Specificity of Arl2/Arl3 signaling is mediated by a ternary Arl3-effector-GAP complex. |
Volume: |
582 |
Issue: |
17 |
Pages: |
2501-7 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
68
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Tubulin proteostasis is regulated by a group of molecular chaperones termed tubulin cofactors (TBC). This entry represents TBCE (tubulin-specific chaperone E), which is an alpha-tubulin binding protein that, together with Arl2 and cofactors D (TBCD), A (TBCA or p14), B (TBCB) and C (TBCC), participate in tubulin biogenesis []. TBCE contains an N-terminal cytoskeleton-associated protein with glycine-rich segment (CAP-Gly) domain, a leucine-rich repeat protein-protein interaction domain followed by leucine-rich repeat (LRR) domains, and a C-terminal ubiquitin-like (Ubl) domain [].Mutations in TBCE gene cause the Kenny-Caffey/Sanjad-Sakati syndrome, characterised by hypoparathyroidism, mental retardation and facial dysmorphism []. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
84
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
72
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Ivanova AA |
Year: |
2014 |
Journal: |
J Biol Chem |
Title: |
Characterization of recombinant ELMOD (cell engulfment and motility domain) proteins as GTPase-activating proteins (GAPs) for ARF family GTPases. |
Volume: |
289 |
Issue: |
16 |
Pages: |
11111-21 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
The tubulin heterodimer consists of one alpha- and one beta-tubulin polypeptide. In humans, five tubulin-specific chaperones termed TBCA/B/C/D/E are essential for bring the alpha- and beta-tubulin subunits together into a tightly associated heterodimer. Following the generation of quasi-native beta- and alpha-tubulin polypeptides (via multiple rounds of ATP-dependent interaction with the cytosolic chaperonin), TBCA and TBCB bind to and stabilise newly synthesised beta- and alpha-tubulin, respectively. The exchange of beta-tubulin between TBCA and TBCD, and of alpha-tubulin between TBCB and TBCE, resulting in the formation of TBCD/beta and TBCE/alpha. These two complexes then interact with each other and form a supercomplex (TBCE/alpha/TBCD/beta). Interaction of the supercomplex with TBCC causes the disassembly of the supercomplex and the release of E-site GDP-bound alpha/beta tubulin heterodimer, which becomes polymerization competent following spontaneous exchange with GTP [].This entry represents tubulin-folding cofactor D (TBCD) and its homologues. Its ability to interact with beta tubulin is regulated via its interaction with ARL2 (ADP ribosylation factor-like protein 2), a small monomeric G protein. ARL2 inhibits the beta-tubulin GTPase activating protein (GAP) activity of TBCD, and its interaction with native tubulin dimers [, ]. |
|
•
•
•
•
•
|
Publication |
First Author: |
Brown MT |
Year: |
1998 |
Journal: |
Mol Cell Biol |
Title: |
ASAP1, a phospholipid-dependent arf GTPase-activating protein that associates with and is phosphorylated by Src. |
Volume: |
18 |
Issue: |
12 |
Pages: |
7038-51 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lin CY |
Year: |
2000 |
Journal: |
J Biol Chem |
Title: |
ARL4, an ARF-like protein that is developmentally regulated and localized to nuclei and nucleoli. |
Volume: |
275 |
Issue: |
48 |
Pages: |
37815-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li W |
Year: |
2019 |
Journal: |
Hum Mol Genet |
Title: |
Elmod3 knockout leads to progressive hearing loss and abnormalities in cochlear hair cell stereocilia. |
Volume: |
28 |
Issue: |
24 |
Pages: |
4103-4112 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wright ZC |
Year: |
2018 |
Journal: |
Sci Rep |
Title: |
ADP-Ribosylation Factor-Like 2 (ARL2) regulates cilia stability and development of outer segments in rod photoreceptor neurons. |
Volume: |
8 |
Issue: |
1 |
Pages: |
16967 |
|
•
•
•
•
•
|
Publication |
First Author: |
East MP |
Year: |
2012 |
Journal: |
J Biol Chem |
Title: |
ELMO domains, evolutionary and functional characterization of a novel GTPase-activating protein (GAP) domain for Arf protein family GTPases. |
Volume: |
287 |
Issue: |
47 |
Pages: |
39538-53 |
|
•
•
•
•
•
|
Publication |
First Author: |
Veltel S |
Year: |
2008 |
Journal: |
Nat Struct Mol Biol |
Title: |
The retinitis pigmentosa 2 gene product is a GTPase-activating protein for Arf-like 3. |
Volume: |
15 |
Issue: |
4 |
Pages: |
373-80 |
|
•
•
•
•
•
|
Publication |
First Author: |
Johnson KR |
Year: |
2012 |
Journal: |
PLoS One |
Title: |
Mutations of the mouse ELMO domain containing 1 gene (Elmod1) link small GTPase signaling to actin cytoskeleton dynamics in hair cell stereocilia. |
Volume: |
7 |
Issue: |
4 |
Pages: |
e36074 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pulkkinen V |
Year: |
2010 |
Journal: |
FASEB J |
Title: |
ELMOD2, a candidate gene for idiopathic pulmonary fibrosis, regulates antiviral responses. |
Volume: |
24 |
Issue: |
4 |
Pages: |
1167-77 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hodgson U |
Year: |
2006 |
Journal: |
Am J Hum Genet |
Title: |
ELMOD2 is a candidate gene for familial idiopathic pulmonary fibrosis. |
Volume: |
79 |
Issue: |
1 |
Pages: |
149-54 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lawson WE |
Year: |
2011 |
Journal: |
Am J Med Sci |
Title: |
Genetics in pulmonary fibrosis--familial cases provide clues to the pathogenesis of idiopathic pulmonary fibrosis. |
Volume: |
341 |
Issue: |
6 |
Pages: |
439-43 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
ELMOD3 (ELMO domain-containing protein 3) is an GTPase-activating protein that acts on Arl2 GTPase. A mutation in the ELMOD3 gene is associated with hearing impairment in humans [].There are six ELMO domain containing proteins identified in humans. They can be classified into two subgroups, ELMOs and ELMODs, according to protein size and domain architecture []. ELMOs are approximately twice as large as ELMODs and contain multiple domains. The function of the ELMO domain is not clear. ELMOs and ELMODs seem to have distinct cellular and biochemical functions. ELMOs interact with DOCKs and enhance the GEF activity of DOCKs, while ELMODs may play a general role in integrating signalling pathways controlled by Arls and other GTPases [, ]. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
ELMOD2 is an GTPase-activating protein that acts on Arl2 and Arf GTPases [, ]. It has been implicated in idiopathic pulmonary fibrosis (IPF) [, ]. It has also being shown to regulate antiviral responses [].There are six ELMO domain containing proteins identified in humans. They can be classified into two subgroups, ELMOs and ELMODs, according to protein size and domain architecture []. ELMOs are approximately twice as large as ELMODs and contain multiple domains. The function of the ELMO domain is not clear. ELMOs and ELMODs seem to have distinct cellular and biochemical functions. ELMOs interact with DOCKs and enhance the GEF activity of DOCKs, while ELMODs may play a general role in integrating signalling pathways controlled by Arls and other GTPases [, ]. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
ELMOD1 is an ELMO domain containing protein that activates Arl2 GTPase []and possibly other GTPases of the Arf family []. Mutations in the mouse ELMOD1 gene cause cochlear hair cell dysfunction and hearing loss []. There are six ELMO domain containing proteins identified in humans. They can be classified into two subgroups, ELMOs and ELMODs, according to protein size and domain architecture []. ELMOs are approximately twice as large as ELMODs and contain multiple domains. The function of the ELMO domain is not clear. ELMOs and ELMODs seem to have distinct cellular and biochemical functions. ELMOs interact with DOCKs and enhance the GEF activity of DOCKs, while ELMODs may play a general role in integrating signalling pathways controlled by Arls and other GTPases [, ]. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
326
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
293
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
381
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
164
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
216
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
269
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
295
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
213
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
326
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
295
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
189
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
164
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
352
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
151
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Kirik V |
Year: |
2002 |
Journal: |
Curr Biol |
Title: |
Functional analysis of the tubulin-folding cofactor C in Arabidopsis thaliana. |
Volume: |
12 |
Issue: |
17 |
Pages: |
1519-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Serna M |
Year: |
2015 |
Journal: |
J Cell Sci |
Title: |
The structure of the complex between α-tubulin, TBCE and TBCB reveals a tubulin dimer dissociation mechanism. |
Volume: |
128 |
Issue: |
9 |
Pages: |
1824-34 |
|
•
•
•
•
•
|
Publication |
First Author: |
Parvari R |
Year: |
2002 |
Journal: |
Nat Genet |
Title: |
Mutation of TBCE causes hypoparathyroidism-retardation-dysmorphism and autosomal recessive Kenny-Caffey syndrome. |
Volume: |
32 |
Issue: |
3 |
Pages: |
448-52 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the ELMO (EnguLfment and Cell MOtility) domain, which is found in a number of eukaryotic proteins involved in the cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility, including CED-12, ELMO-1 and ELMO-2. ELMO-1 and ELMO-2 are components of signalling pathways that regulate phagocytosis and cell migration and are mammalian orthologues of the Caenorhabditis elegans gene, ced-12 that is required for the engulfment of dying cells and cell migration. ELMO-1/2 act in association with DOCK1 and CRK. ELMO-1/2 interact with the SH3-domain of DOCK1 via an SH3-binding site to enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1. ELMO-1/2 could be part of a complex with DOCK1 and Rac1 that could be required to activate Rac Rho small GTPases. Regulatory GTPases in the Ras superfamily employ a cycle of alternating GTP binding and hydrolysis, controlled by guanine nucleotide exchange factors and GTPase-activating proteins (GAPs), as essential features of their actions in cells. Within the Ras superfamily, the Arf family is composed of 30 members, including 22 Arf-like (Arl) proteins. The ELMO domain has been proposed to be a GAP domain for ARL2 and other members of the Arf family []. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1196
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
182
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
182
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
180
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
428
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
193
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Tian G |
Year: |
2013 |
Journal: |
Methods Cell Biol |
Title: |
Tubulin-specific chaperones: components of a molecular machine that assembles the α/β heterodimer. |
Volume: |
115 |
|
Pages: |
155-71 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
424
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
150
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
524
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
341
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
590
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
506
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
150
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
290
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
150
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
341
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
732
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
720
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
727
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
552
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
741
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
703
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
347
 |
Fragment?: |
false |
|
•
•
•
•
•
|