Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_06 |
|
Specimen Label: |
euxassay_005505_06 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_07 |
|
Specimen Label: |
euxassay_005505_07 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_08 |
|
Specimen Label: |
euxassay_005505_08 |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_09 |
|
Specimen Label: |
euxassay_005505_09 |
Detected: |
true |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_16 |
|
Specimen Label: |
euxassay_005505_16 |
Detected: |
true |
Specimen Num: |
12 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_17 |
|
Specimen Label: |
euxassay_005505_17 |
Detected: |
true |
Specimen Num: |
13 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_18 |
|
Specimen Label: |
euxassay_005505_18 |
Detected: |
true |
Specimen Num: |
14 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_19 |
|
Specimen Label: |
euxassay_005505_19 |
Detected: |
true |
Specimen Num: |
15 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_20 |
|
Specimen Label: |
euxassay_005505_20 |
Detected: |
true |
Specimen Num: |
16 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_21 |
|
Specimen Label: |
euxassay_005505_21 |
Detected: |
true |
Specimen Num: |
17 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4885594 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754028 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4945778 |
Age: |
postnatal day 7 |
Image: |
g01512 P7 |
|
Specimen Label: |
g01512 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4885594 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754028 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4945778 |
Age: |
postnatal day 42 |
Image: |
g01512 Adult |
|
Specimen Label: |
g01512 Adult |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4885594 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3280923 |
Pattern: |
Widespread |
Stage: |
TS23 |
Assay Id: |
MGI:4945778 |
Age: |
embryonic day 15.5 |
Image: |
g01512 E15.5 |
|
Specimen Label: |
g01512 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4885594 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3280928 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4945778 |
Age: |
postnatal day 7 |
Image: |
g01512 P7 |
|
Specimen Label: |
g01512 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4885594 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3280928 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4945778 |
Age: |
postnatal day 42 |
Image: |
g01512 Adult |
|
Specimen Label: |
g01512 Adult |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4885594 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3266523 |
Pattern: |
Widespread |
Stage: |
TS23 |
Assay Id: |
MGI:4945778 |
Age: |
embryonic day 15.5 |
Image: |
g01512 E15.5 |
|
Specimen Label: |
g01512 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679523 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_07 |
|
Specimen Label: |
euxassay_005505_07 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679523 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_16 |
|
Specimen Label: |
euxassay_005505_16 |
Detected: |
true |
Specimen Num: |
12 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679523 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_17 |
|
Specimen Label: |
euxassay_005505_17 |
Detected: |
true |
Specimen Num: |
13 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4885594 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4945778 |
Age: |
embryonic day 15.5 |
Image: |
g01512 E15.5 |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g01512 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4885594 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757728 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4945778 |
Age: |
postnatal day 7 |
Image: |
g01512 P7 |
|
Specimen Label: |
g01512 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4885594 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757728 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4945778 |
Age: |
postnatal day 42 |
Image: |
g01512 Adult |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g01512 Adult |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679823 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_08 |
|
Specimen Label: |
euxassay_005505_08 |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3278285 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679823 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823294 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005505_16 |
|
Specimen Label: |
euxassay_005505_16 |
Detected: |
true |
Specimen Num: |
12 |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
Publication |
First Author: |
Rudnick JA |
Year: |
2021 |
Journal: |
Genes Dev |
Title: |
Autophagy in stromal fibroblasts promotes tumor desmoplasia and mammary tumorigenesis. |
Volume: |
35 |
Issue: |
13-14 |
Pages: |
963-975 |
|
•
•
•
•
•
|
Publication |
First Author: |
Marsh T |
Year: |
2020 |
Journal: |
Dev Cell |
Title: |
Autophagic Degradation of NBR1 Restricts Metastatic Outgrowth during Mammary Tumor Progression. |
Volume: |
52 |
Issue: |
5 |
Pages: |
591-604.e6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim JH |
Year: |
2015 |
Journal: |
Autophagy |
Title: |
Insights into autophagosome maturation revealed by the structures of ATG5 with its interacting partners. |
Volume: |
11 |
Issue: |
1 |
Pages: |
75-87 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tanida I |
Year: |
2002 |
Journal: |
Biochem Biophys Res Commun |
Title: |
Murine Apg12p has a substrate preference for murine Apg7p over three Apg8p homologs. |
Volume: |
292 |
Issue: |
1 |
Pages: |
256-62 |
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•
•
•
•
•
|
Publication |
First Author: |
Yang Y |
Year: |
2022 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Autophagy in PDGFRα+ mesenchymal cells is essential for intestinal stem cell survival. |
Volume: |
119 |
Issue: |
21 |
Pages: |
e2202016119 |
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•
•
•
•
•
|
Publication |
First Author: |
Hwang S |
Year: |
2012 |
Journal: |
Cell Host Microbe |
Title: |
Nondegradative role of Atg5-Atg12/ Atg16L1 autophagy protein complex in antiviral activity of interferon gamma. |
Volume: |
11 |
Issue: |
4 |
Pages: |
397-409 |
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•
•
•
•
•
|
Publication |
First Author: |
Yang JW |
Year: |
2013 |
Journal: |
Histochem Cell Biol |
Title: |
Autophagy appears during the development of the mouse lower first molar. |
Volume: |
139 |
Issue: |
1 |
Pages: |
109-18 |
|
•
•
•
•
•
|
Publication |
First Author: |
Martinez J |
Year: |
2015 |
Journal: |
Nat Cell Biol |
Title: |
Molecular characterization of LC3-associated phagocytosis reveals distinct roles for Rubicon, NOX2 and autophagy proteins. |
Volume: |
17 |
Issue: |
7 |
Pages: |
893-906 |
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•
•
•
•
•
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Publication |
First Author: |
Itoh T |
Year: |
2008 |
Journal: |
Mol Biol Cell |
Title: |
Golgi-resident small GTPase Rab33B interacts with Atg16L and modulates autophagosome formation. |
Volume: |
19 |
Issue: |
7 |
Pages: |
2916-25 |
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•
•
•
•
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Publication |
First Author: |
Bell BD |
Year: |
2008 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
FADD and caspase-8 control the outcome of autophagic signaling in proliferating T cells. |
Volume: |
105 |
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43 |
Pages: |
16677-82 |
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•
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Publication |
First Author: |
Dooley HC |
Year: |
2014 |
Journal: |
Mol Cell |
Title: |
WIPI2 links LC3 conjugation with PI3P, autophagosome formation, and pathogen clearance by recruiting Atg12-5-16L1. |
Volume: |
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2 |
Pages: |
238-52 |
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•
•
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Publication |
First Author: |
Mortensen M |
Year: |
2010 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Loss of autophagy in erythroid cells leads to defective removal of mitochondria and severe anemia in vivo. |
Volume: |
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832-7 |
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•
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Publication |
First Author: |
Dellorusso PV |
Year: |
2024 |
Journal: |
Cell Stem Cell |
Title: |
Autophagy counters inflammation-driven glycolytic impairment in aging hematopoietic stem cells. |
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Publication |
First Author: |
Tasaki T |
Year: |
2013 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
UBR box N-recognin-4 (UBR4), an N-recognin of the N-end rule pathway, and its role in yolk sac vascular development and autophagy. |
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Year: |
2020 |
Journal: |
Nat Commun |
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The endoplasmic reticulum stress-autophagy pathway controls hypothalamic development and energy balance regulation in leptin-deficient neonates. |
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2016 |
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Stem Cell Reports |
Title: |
EVA1A/TMEM166 Regulates Embryonic Neurogenesis by Autophagy. |
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J Invest Dermatol |
Title: |
Constitutive Autophagy and Nucleophagy during Epidermal Differentiation. |
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A family of IFN-γ-inducible 65-kD GTPases protects against bacterial infection. |
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EMBO Rep |
Title: |
Autophagy in Myf5+ progenitors regulates energy and glucose homeostasis through control of brown fat and skeletal muscle development. |
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Loss of Mptx2 alters bacteria composition and intestinal homeostasis potentially by impairing autophagy. |
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Sci Signal |
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Augmented BMP signaling commits cranial neural crest cells to a chondrogenic fate by suppressing autophagic β-catenin degradation. |
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J Comp Neurol |
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Expression profile analysis of vulnerable CA1 pyramidal neurons in young-Middle-Aged Ts65Dn mice. |
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Mouse Genome Informatics Scientific Curators |
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Title: |
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Publication |
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Title: |
Manual transfer of experimentally-verified manual GO annotation data to homologous complexes by curator judgment of sequence, composition and function similarity |
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Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
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Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
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Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
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Title: |
Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database |
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First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
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First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
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Title: |
Nomenclature Committee Use |
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Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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Publication |
First Author: |
Helmholtz Zentrum Muenchen GmbH |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
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Title: |
MGI Sequence Curation Reference |
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Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
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Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
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Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
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Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
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First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
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Title: |
Annotation inferences using phylogenetic trees |
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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First Author: |
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1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
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First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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GemPharmatech |
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2020 |
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Title: |
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Publication |
First Author: |
GOA curators |
Year: |
2016 |
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Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
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UniProt Feature |
Begin: |
1 |
Description: |
Ubiquitin-like protein ATG12 |
Type: |
chain |
End: |
141 |
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Gene |
Type: |
gene |
Organism: |
chimpanzee |
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•
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GO Term |
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Publication |
First Author: |
Zhang J |
Year: |
2009 |
Journal: |
Blood |
Title: |
Mitochondrial clearance is regulated by Atg7-dependent and -independent mechanisms during reticulocyte maturation. |
Volume: |
114 |
Issue: |
1 |
Pages: |
157-64 |
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•
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Interaction Experiment |
Description: |
ATG12 conjugation to ATG3 regulates mitochondrial homeostasis and cell death. |
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•
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Publication |
First Author: |
Sou YS |
Year: |
2008 |
Journal: |
Mol Biol Cell |
Title: |
The Atg8 conjugation system is indispensable for proper development of autophagic isolation membranes in mice. |
Volume: |
19 |
Issue: |
11 |
Pages: |
4762-75 |
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•
•
•
•
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Publication |
First Author: |
Nemoto T |
Year: |
2003 |
Journal: |
J Biol Chem |
Title: |
The mouse APG10 homologue, an E2-like enzyme for Apg12p conjugation, facilitates MAP-LC3 modification. |
Volume: |
278 |
Issue: |
41 |
Pages: |
39517-26 |
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•
•
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•
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Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
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•
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Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
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Publication |
First Author: |
Shintani T |
Year: |
1999 |
Journal: |
EMBO J |
Title: |
Apg10p, a novel protein-conjugating enzyme essential for autophagy in yeast. |
Volume: |
18 |
Issue: |
19 |
Pages: |
5234-41 |
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Protein Domain |
Type: |
Family |
Description: |
Atg10 is an E2-like enzyme required for the cytoplasm to vacuole transport (Cvt), autophagy and nucleophagy. It catalyses the conjugation of Atg12 to Atg5, which is required for proper localisation of Atg8 to the preautophagosomal structure (PAS) []. |
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Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
215
 |
Fragment?: |
false |
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•
•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
314
 |
Fragment?: |
false |
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•
•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
211
 |
Fragment?: |
false |
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•
•
•
•
|
Publication |
First Author: |
Noda T |
Year: |
2008 |
Journal: |
Autophagy |
Title: |
The Ubi brothers reunited. |
Volume: |
4 |
Issue: |
4 |
Pages: |
540-1 |
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•
•
•
•
•
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Publication |
First Author: |
Yamada Y |
Year: |
2007 |
Journal: |
J Biol Chem |
Title: |
The crystal structure of Atg3, an autophagy-related ubiquitin carrier protein (E2) enzyme that mediates Atg8 lipidation. |
Volume: |
282 |
Issue: |
11 |
Pages: |
8036-43 |
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•
•
•
•
•
|
Publication |
First Author: |
Flanagan MD |
Year: |
2013 |
Journal: |
Cell Cycle |
Title: |
An Atg10-like E2 enzyme is essential for cell cycle progression but not autophagy in Schizosaccharomyces pombe. |
Volume: |
12 |
Issue: |
2 |
Pages: |
271-7 |
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•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry represents a group of ubiquitin-like-conjugating enzymes, including Atg3 and Atg10.Atg3 is the E2 enzyme for the LC3 lipidation process []. It is essential for autophagocytosis. The super protein complex, the Atg16L complex, consists of multiple Atg12-Atg5 conjugates. Atg16L has an E3-like role in the LC3 lipidation reaction. The activated intermediate, LC3-Atg3 (E2), is recruited to the site where the lipidation takes place []. Atg3 catalyses the conjugation of Atg8 and phosphatidylethanolamine (PE). Atg3 has an alpha/β-fold, and its core region is topologically similar to canonical E2 enzymes. Atg3 has two regions inserted in the core region and another with a long α-helical structure that protrudes from the core region as far as 30 A []. It interacts with atg8 through an intermediate thioester bond between Cys-288 and the C-terminal Gly of atg8. It also interacts with the C-terminal region of the E1-like atg7 enzyme.Atg10 acts as an E2-like enzyme that catalyzes the conjugation of ATG12 to ATG5 []. |
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•
•
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•
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Publication |
First Author: |
Yang L |
Year: |
2020 |
Journal: |
Commun Biol |
Title: |
Macrophage scavenger receptor 1 controls Chikungunya virus infection through autophagy in mice. |
Volume: |
3 |
Issue: |
1 |
Pages: |
556 |
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•
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•
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