Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1736222 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1683322 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1700022 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1832122 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1876522 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
Note: |
Expression was not detected in the immune system. |
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1741222 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754022 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3599822 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3280922 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1833322 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3287022 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752522 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1821522 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3557722 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1702122 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1756322 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1668822 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757722 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757522 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1738322 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1802422 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1768022 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
Note: |
Expression was not detected in the skull (base and vault). |
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4424163 |
Assay Type: |
RNA in situ |
Annotation Date: |
2012-06-12 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:2672022 |
|
Stage: |
TS22 |
Assay Id: |
MGI:5422211 |
Age: |
embryonic day 14.5 |
|
Note: |
Expression was not detected in whisker follicle. |
Specimen Label: |
EG1545; Specimen G0504 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
Publication |
First Author: |
Merla G |
Year: |
2002 |
Journal: |
Hum Genet |
Title: |
Identification of additional transcripts in the Williams-Beuren syndrome critical region. |
Volume: |
110 |
Issue: |
5 |
Pages: |
429-38 |
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•
•
•
•
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Publication |
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DeSilva U |
Year: |
2002 |
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Genome Res |
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•
•
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Publication |
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Mouse Genome Sequence and Mouse Genome Informatics Scientific Curators |
Year: |
2001 |
|
Title: |
Mouse Genome Sequence Project Annotation |
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•
•
•
•
•
|
Publication |
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Shanghai Model Organisms Center |
Year: |
2017 |
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MGI Direct Data Submission |
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Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
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•
•
•
•
•
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Publication |
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MGI and IMPC |
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2017 |
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MGI Direct Data Submission |
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MGI Curation of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
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•
•
•
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Publication |
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Mouse Genome Informatics Scientific Curators |
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RIKEN Data Curation in Mouse Genome Informatics |
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•
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•
•
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Publication |
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Nucleic Acids Res |
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GenePaint.org: an atlas of gene expression patterns in the mouse embryo. |
Volume: |
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Database issue |
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•
•
•
•
|
Publication |
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Velocigene |
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2008 |
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MGI Direct Data Submission |
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Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
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•
•
•
•
•
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Publication |
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International Mouse Strain Resource |
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Database Download |
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MGI download of germline transmission data for alleles from IMSR strain data |
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•
•
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Publication |
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Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
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Database Release |
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Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
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•
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Publication |
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Genome Res |
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Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
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•
•
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Publication |
First Author: |
Helmholtz Zentrum Muenchen GmbH |
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2010 |
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MGI Direct Data Submission |
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Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
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The transcriptional landscape of the mammalian genome. |
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5740 |
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Functional annotation of a full-length mouse cDNA collection. |
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Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Mouse Genome Informatics |
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Mouse Genome Informatics Scientific Curators |
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2005 |
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Mouse Genome Informatics Scientific Curators |
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Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Publication |
First Author: |
White J |
Year: |
2008 |
Journal: |
Mol Cell Biol |
Title: |
Bud23 methylates G1575 of 18S rRNA and is required for efficient nuclear export of pre-40S subunits. |
Volume: |
28 |
Issue: |
10 |
Pages: |
3151-61 |
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Allele |
Name: |
BUD23, rRNA methyltransferase and ribosome maturation factor; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
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Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
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Publication |
First Author: |
Doll A |
Year: |
2001 |
Journal: |
Cytogenet Cell Genet |
Title: |
Characterization of two novel genes, WBSCR20 and WBSCR22, deleted in Williams-Beuren syndrome. |
Volume: |
95 |
Issue: |
1-2 |
Pages: |
20-7 |
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Protein Domain |
Type: |
Domain |
Description: |
This entry represents the C-terminal domain of 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23 []. Bud23 homologues can be found from yeast to human. They are S-adenosyl-L-methionine-dependent methyltransferases that specifically methylates the N7 position of a guanine in 18S rRNA []. Bud23 homologue in Arabidopsis, known as Rid2 (ROOT INITIATION DEFECTIVE 2), is also involved in pre-rRNA processing []. In humans, Bud23 is located in the Williams-Beuren syndrome (WBS) critical region []. |
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Publication |
First Author: |
Zorbas C |
Year: |
2015 |
Journal: |
Mol Biol Cell |
Title: |
The human 18S rRNA base methyltransferases DIMT1L and WBSCR22-TRMT112 but not rRNA modification are required for ribosome biogenesis. |
Volume: |
26 |
Issue: |
11 |
Pages: |
2080-95 |
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Publication |
First Author: |
Ohbayashi I |
Year: |
2011 |
Journal: |
Plant J |
Title: |
Genetic identification of Arabidopsis RID2 as an essential factor involved in pre-rRNA processing. |
Volume: |
67 |
Issue: |
1 |
Pages: |
49-60 |
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Protein Domain |
Type: |
Family |
Description: |
This entry includes yeast Bud23 and its homologues from animals and plants. They are S-adenosyl-L-methionine-dependent methyltransferases that specifically methylates the N7 position of a guanine in 18S rRNA []. Bud23 homologue in Arabidopsis, known as Rid2 (ROOT INITIATION DEFECTIVE 2), is also involved in pre-rRNA processing []. |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
139
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Fragment?: |
true |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
281
 |
Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
281
 |
Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
300
 |
Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
246
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Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
235
 |
Fragment?: |
true |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
281
 |
Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
259
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Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
92
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Fragment?: |
true |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
81
 |
Fragment?: |
true |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
244
 |
Fragment?: |
false |
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