Type |
Details |
Score |
Publication |
First Author: |
Deng F |
Year: |
2008 |
Journal: |
J Virol |
Title: |
Hypovirus papain-like protease p48 is required for initiation but not for maintenance of virus RNA propagation in the chestnut blight fungus Cryphonectria parasitica. |
Volume: |
82 |
Issue: |
13 |
Pages: |
6369-78 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents a peptidase C7 domain, which is found in HAV papain-like proteases p48 and p29 [, ].Hypoviruses are positive-strand RNA mycoviruses that attenuate virulence of their pathogenic fungal hosts [E1]. They employ a gene expression strategy that involves the autocatalytic processing of the N-terminal portion of encoded polyproteins by papain-like protease domains. The prototypic hypovirus CHV-1/EP713, responsible for virulence attenuation (hypovirulence) of the chestnut blight fungus Cryphonectria parasitica, encodes two contiguous open reading frames (ORFs) designated ORF A and ORF B, which contain N-terminal proteases p29 and p48, respectively. Protease p29 functions as a suppressor of the RNA silencing defense response, while p48 is required for viral RNA replication [, , ]. The HAV papain-like protease p29 is a cysteine protease, which forms the peptidase family C7 [E2]. A Cys and a His catalytic residue are essential for autocatalytic cleavage at a glycine dipeptide clevage site located at the C- terminus of the domain [, , ]. The HAV papain-like protease p48 is a cysteine protease, which forms the peptidase family C8 [E3]. A Cys anda His catalytic residue are essential for autocatalytic cleavage between the cleavage site residues Gly and Ala located at the C terminus of the domain [, , ]. |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
23 |
Ends At: |
28 |
|
•
•
•
•
•
|
Publication |
First Author: |
Afkar E |
Year: |
1999 |
Journal: |
FEMS Microbiol Lett |
Title: |
Purification and characterization of triheme cytochrome c7 from the metal-reducing bacterium, Geobacter metallireducens. |
Volume: |
175 |
Issue: |
2 |
Pages: |
205-10 |
|
•
•
•
•
•
|
Gene |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
dog, domestic |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chimpanzee |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
cattle |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chicken |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, western clawed |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, African clawed |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, African clawed |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, African clawed |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
16 |
Ends At: |
17 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
26 |
Ends At: |
26 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
26 |
Ends At: |
26 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
26 |
Ends At: |
26 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
26 |
Ends At: |
26 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
15 |
Ends At: |
28 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
23 |
Ends At: |
26 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
26 |
Ends At: |
26 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
23 |
Ends At: |
26 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
26 |
Ends At: |
26 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
23 |
Ends At: |
26 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
18 |
Ends At: |
22 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
26 |
Ends At: |
26 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
26 |
Ends At: |
26 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
26 |
Ends At: |
28 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
26 |
Ends At: |
26 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1739417 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1946423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823768 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001234_13 |
|
Specimen Label: |
euxassay_001234_13 |
Detected: |
true |
Specimen Num: |
13 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1739417 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1946523 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4823768 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001234_14 |
|
Specimen Label: |
euxassay_001234_14 |
Detected: |
true |
Specimen Num: |
14 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1339294 |
Assay Type: |
RNA in situ |
Annotation Date: |
1999-07-02 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:1339296 |
Age: |
embryonic day 11.5 |
Image: |
2D |
|
Specimen Label: |
2D |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927926 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:1928653 |
Age: |
embryonic day 11.5 |
Image: |
8. A., B. |
Note: |
Expression is detected in the paraxial mesoderm up to and in the most caudal region of basioccipital bone anlage. Expression is also detected in the vertebrae from thoracic 11 up to cervical 1. Data posterior to C5 is summarized in Fig. 9. |
Specimen Label: |
8. A., B. |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927926 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:1928653 |
Age: |
embryonic day 11.5 |
Image: |
8. C., D. |
Note: |
Expression is detected in the paraxial mesoderm up to cervical vertebrae 1. Expression is also detected in the vertebrae from thoracic 11 up to cervical 1. Data posterior to C5 is summarized in Fig. 9. |
Specimen Label: |
8. C., D. |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927928 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Uniform |
Stage: |
TS19 |
Assay Id: |
MGI:1928656 |
Age: |
embryonic day 11.5 |
Image: |
8. E., F. |
Note: |
Expression is detected in the vertebrae from thoracic 11 up to cervical 1. Data posterior to C5 is summarized in Fig. 9. |
Specimen Label: |
8. E., F. |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927928 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:1928656 |
Age: |
embryonic day 11.5 |
Image: |
8. G., H. |
Note: |
Expression is detected in the vertebrae from thoracic 11 up to the boundary between vertebrae 1 and 2. Data posterior to C5 is summarized in Fig. 9. |
Specimen Label: |
8. G., H. |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927972 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Uniform |
Stage: |
TS19 |
Assay Id: |
MGI:1928657 |
Age: |
embryonic day 11.5 |
Image: |
8. I., J. |
Note: |
Expression is detected in the vertebrae from thoracic 11 up to cervical 1. Data posterior to C5 is summarized in Fig. 9. |
Specimen Label: |
8. I., J. |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927972 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:1928657 |
Age: |
embryonic day 11.5 |
Image: |
8. K., L. |
Note: |
Expression is detected in the vertebrae from thoracic 11 up to the boundary between vertebrae 1 and 2. Data posterior to C5 is summarized in Fig. 9. |
Specimen Label: |
8. K., L. |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927951 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:1928658 |
Age: |
embryonic day 11.5 |
Image: |
8. M., N. |
Note: |
Expression is detected in the vertebrae from thoracic 11 up to the boundary between cervical vertebrae 1 and 2. Data posterior to C5 is summarized in Fig. 9. |
Specimen Label: |
8. M., N. |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927951 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:1928658 |
Age: |
embryonic day 11.5 |
Image: |
8. O., P. |
Note: |
Expression is detected in the vertebrae from thoracic 11 up to the boundary between cervical vertebrae 1 and 2 for 2 of 4 specimens. The boundary is between C2/3 for two other specimens. Data posterior to C5 is summarized in Fig. 9. |
Specimen Label: |
8. O., P. |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927918 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:1928659 |
Age: |
embryonic day 11.5 |
|
Note: |
Expression is detected in the vertebrae from thoracic 11 up to the boundary between cervical vertebrae 1 and 2. Data is summarized in Fig. 9. |
Specimen Label: |
E11.5 -/- |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927918 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:1928659 |
Age: |
embryonic day 11.5 |
|
Note: |
Expression is detected in the vertebrae from thoracic 11 up to the boundary between cervical vertebrae 2 and 3. Data is summarized in Fig. 9. |
Specimen Label: |
E11.5 +/+ |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927921 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
|
Stage: |
TS19 |
Assay Id: |
MGI:1928660 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
E11.5 -/- |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927921 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
|
Stage: |
TS19 |
Assay Id: |
MGI:1928660 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
E11.5 +/+ |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927964 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
|
Stage: |
TS19 |
Assay Id: |
MGI:1928662 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
E11.5 +/+ |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927968 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
|
Stage: |
TS19 |
Assay Id: |
MGI:1928664 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
E11.5 -/- |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927968 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
|
Stage: |
TS19 |
Assay Id: |
MGI:1928664 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
E11.5 +/+ |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
|
Stage: |
TS19 |
Assay Id: |
MGI:1928665 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
E11.5 -/- |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1341313 |
Assay Type: |
RNA in situ |
Annotation Date: |
1999-08-10 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:1341315 |
Age: |
embryonic day 12.5 |
Image: |
6B |
|
Specimen Label: |
6B |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927977 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Uniform |
Stage: |
TS20 |
Assay Id: |
MGI:1928652 |
Age: |
embryonic day 12.5 |
Image: |
7. A., B. |
Note: |
Cartilage condensations in the anterior arch of the atlas are not visible suggesting a loss of identity of C1. However, expression is detected up to and including the level of the proatlas. |
Specimen Label: |
7. A., B. |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927977 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:1928652 |
Age: |
embryonic day 12.5 |
Image: |
7. C., D. |
|
Specimen Label: |
7. C., D. |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1339020 |
Assay Type: |
RNA in situ |
Annotation Date: |
1999-08-10 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:1341328 |
Age: |
embryonic day 12.5 |
Image: |
6C |
|
Specimen Label: |
6C |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927953 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:1928661 |
Age: |
embryonic day 11.5 |
|
Note: |
Expression is detected in the vertebrae from thoracic 11 up to the boundary between thoracic vertebrae 5 and 6. Data is summarized in Fig. 9. |
Specimen Label: |
E11.5 -/- |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927953 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:1928661 |
Age: |
embryonic day 11.5 |
|
Note: |
Expression is detected in the vertebrae from thoracic 11 up to the boundary between thoracic vertebrae 6 and 7. Data is summarized in Fig. 9. |
Specimen Label: |
E11.5 +/+ |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927964 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:1928662 |
Age: |
embryonic day 11.5 |
|
Note: |
Expression is detected in the vertebrae from thoracic 11 up to the boundary between cervical vertebrae 5 and thoracic 6. Data is summarized in Fig. 9. |
Specimen Label: |
E11.5 -/- |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927966 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:1928663 |
Age: |
embryonic day 11.5 |
|
Note: |
Expression is detected in the vertebrae from thoracic 11 up to the boundary between cervical vertebrae 6 and 7 for 3 specimens and C7/T1 for 2. Data is summarized in Fig. 9. |
Specimen Label: |
E11.5 -/- |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927966 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:1928663 |
Age: |
embryonic day 11.5 |
|
Note: |
Expression is detected in the vertebrae from thoracic 11 up to the boundary between cervical vertebrae 7 and thoracic 1 for 3 specimens and between C6/7 for 2. Data is summarized in Fig. 9. |
Specimen Label: |
E11.5 +/+ |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1927970 |
Assay Type: |
RNA in situ |
Annotation Date: |
2001-01-09 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
|
Stage: |
TS19 |
Assay Id: |
MGI:1928665 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
E11.5 +/+ |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1342074 |
Assay Type: |
RNA in situ |
Annotation Date: |
1999-08-18 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
|
Stage: |
TS20 |
Assay Id: |
MGI:1342087 |
Age: |
embryonic day 12.5 |
Image: |
6B -4.3 |
Note: |
The Hox-4.3 expression domain is restricted along the anteroposterior axis in some ectoderm (the nervous system) and mesoderm derivatives (e.g. the prevertebrae, gut, or kidney). |
Specimen Label: |
6B -4.3 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1339019 |
Assay Type: |
RNA in situ |
Annotation Date: |
2003-01-08 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:2447476 |
Age: |
embryonic day 12.5 |
Image: |
12C |
|
Specimen Label: |
12C |
Detected: |
true |
Specimen Num: |
12 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1932893 |
Assay Type: |
RNA in situ |
Annotation Date: |
2009-05-12 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:3843877 |
Age: |
embryonic day 12.5 |
Image: |
6b |
Note: |
Expression in the prevertebra, including that of the axis. |
Specimen Label: |
6b |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5807076 |
Assay Type: |
RNA in situ |
Annotation Date: |
2016-11-14 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:5807077 |
Age: |
embryonic day 11.5 |
Image: |
4A/A' |
|
Specimen Label: |
4A/A' |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3798091 |
Assay Type: |
RNA in situ |
Annotation Date: |
2017-01-24 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5818864 |
Age: |
embryonic day 12.5 |
Image: |
6 |
|
Specimen Label: |
6 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5818903 |
Assay Type: |
RNA in situ |
Annotation Date: |
2017-01-24 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5818904 |
Age: |
embryonic day 12.5 |
|
|
Specimen Label: |
not shown |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1261983 |
Assay Type: |
RNA in situ |
Annotation Date: |
2017-09-22 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5910235 |
Age: |
embryonic day 12.5 |
Image: |
3 |
|
Specimen Label: |
3 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1261984 |
Assay Type: |
RNA in situ |
Annotation Date: |
2017-09-22 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
|
Stage: |
TS20 |
Assay Id: |
MGI:5910240 |
Age: |
embryonic day 12.5 |
Image: |
3 |
|
Specimen Label: |
3 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1261983 |
Assay Type: |
RNA in situ |
Annotation Date: |
2017-09-22 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5910235 |
Age: |
embryonic day 12.5 |
Image: |
4 WT |
|
Specimen Label: |
4 WT |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1261983 |
Assay Type: |
RNA in situ |
Annotation Date: |
2017-09-22 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5910235 |
Age: |
embryonic day 12.5 |
Image: |
4 Hoxa-4-/- |
|
Specimen Label: |
4 Hoxa-4-/- |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1261983 |
Assay Type: |
RNA in situ |
Annotation Date: |
2017-09-22 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5910235 |
Age: |
embryonic day 12.5 |
Image: |
5 WT |
|
Specimen Label: |
5 WT |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1261983 |
Assay Type: |
RNA in situ |
Annotation Date: |
2017-09-22 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5910235 |
Age: |
embryonic day 12.5 |
Image: |
5 Hoxa-5-/- |
|
Specimen Label: |
5 Hoxa-5-/- |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1339294 |
Assay Type: |
RNA in situ |
Annotation Date: |
2017-10-04 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935019 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:5910893 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
1d |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1339019 |
Assay Type: |
RNA in situ |
Annotation Date: |
2020-10-20 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1935020 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:6467736 |
Age: |
embryonic day 12.5 |
Image: |
2A/B |
|
Specimen Label: |
2A/B |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
26 |
Ends At: |
26 |
|
•
•
•
•
•
|
Allele |
Name: |
complement component 7; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3763169 |
Assay Type: |
RNA in situ |
Annotation Date: |
2008-04-04 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757720 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:3776083 |
Age: |
embryonic day 12.5 |
|
Note: |
Expression was detected in the C7 region of the spinal cord. |
Specimen Label: |
S2F |
Detected: |
true |
Specimen Num: |
10 |
|
•
•
•
•
•
|
Publication |
First Author: |
Aleshin AE |
Year: |
2012 |
Journal: |
J Biol Chem |
Title: |
Structure of complement C6 suggests a mechanism for initiation and unidirectional, sequential assembly of membrane attack complex (MAC). |
Volume: |
287 |
Issue: |
13 |
Pages: |
10210-22 |
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
transcription profiling by array |
Study Type: |
Baseline |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
EMAPA Term |
Starts At: |
26 |
Ends At: |
26 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
866
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
751
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
839
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
778
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 27, Michael Glickman |
Allele Type: |
Transgenic |
Attribute String: |
Inserted expressed sequence |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
Publication |
First Author: |
Meng X |
Year: |
2009 |
Journal: |
J Virol |
Title: |
Vaccinia virus K1L and C7L inhibit antiviral activities induced by type I interferons. |
Volume: |
83 |
Issue: |
20 |
Pages: |
10627-36 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This family includes Poxvirus C7 and F8A proteins. The C7 protein is an interferon antagonist, inhibiting its antiviral activity []. |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
223
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
160
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
204
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|