Type |
Details |
Score |
Publication |
First Author: |
Youn BS |
Year: |
1995 |
Journal: |
J Immunol |
Title: |
A novel chemokine, macrophage inflammatory protein-related protein-2, inhibits colony formation of bone marrow myeloid progenitors. |
Volume: |
155 |
Issue: |
5 |
Pages: |
2661-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hara T |
Year: |
1995 |
Journal: |
J Immunol |
Title: |
Molecular cloning and functional characterization of a novel member of the C-C chemokine family. |
Volume: |
155 |
Issue: |
11 |
Pages: |
5352-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Byrd LG |
Year: |
1993 |
Journal: |
Immunogenetics |
Title: |
Regional localization of the nu mutation on mouse chromosome 11. |
Volume: |
37 |
Issue: |
2 |
Pages: |
157-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Farmaki E |
Year: |
2016 |
Journal: |
Oncogene |
Title: |
A CCL8 gradient drives breast cancer cell dissemination. |
Volume: |
35 |
Issue: |
49 |
Pages: |
6309-6318 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu X |
Year: |
2019 |
Journal: |
Glia |
Title: |
MiR-409-3p and MiR-1896 co-operatively participate in IL-17-induced inflammatory cytokine production in astrocytes and pathogenesis of EAE mice via targeting SOCS3/STAT3 signaling. |
Volume: |
67 |
Issue: |
1 |
Pages: |
101-112 |
|
•
•
•
•
•
|
Publication |
First Author: |
Baldacci PA |
Year: |
1996 |
Journal: |
Mamm Genome |
Title: |
A high-resolution map around the locus Om on mouse Chromosome 11. |
Volume: |
7 |
Issue: |
2 |
Pages: |
114-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Le Bras S |
Year: |
2002 |
Journal: |
Gene |
Title: |
Transcript map of the Ovum mutant (Om) locus: isolation by exon trapping of new candidate genes for the DDK syndrome. |
Volume: |
296 |
Issue: |
1-2 |
Pages: |
75-86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bollag RJ |
Year: |
1994 |
Journal: |
Nat Genet |
Title: |
An ancient family of embryonically expressed mouse genes sharing a conserved protein motif with the T locus. |
Volume: |
7 |
Issue: |
3 |
Pages: |
383-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wilson SD |
Year: |
1990 |
Journal: |
J Exp Med |
Title: |
Clustering of cytokine genes on mouse chromosome 11. |
Volume: |
171 |
Issue: |
4 |
Pages: |
1301-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nehls M |
Year: |
1995 |
Journal: |
Mamm Genome |
Title: |
YAC/P1 contigs defining the location of 56 microsatellite markers and several genes across a 3.4-cM interval on mouse chromosome 11. |
Volume: |
6 |
Issue: |
5 |
Pages: |
321-31 |
|
•
•
•
•
•
|
Publication |
First Author: |
Blackburn CC |
Year: |
1995 |
Journal: |
Genomics |
Title: |
A high-resolution map of the chromosomal region surrounding the nude gene. |
Volume: |
26 |
Issue: |
2 |
Pages: |
308-17 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cohen-Tannoudji M |
Year: |
2000 |
Journal: |
Genomics |
Title: |
A 2-Mb YAC/BAC-based physical map of the ovum mutant (Om) locus region on mouse chromosome 11. |
Volume: |
68 |
Issue: |
3 |
Pages: |
273-82 |
|
•
•
•
•
•
|
Publication |
First Author: |
Love JM |
Year: |
1990 |
Journal: |
Nucleic Acids Res |
Title: |
Towards construction of a high resolution map of the mouse genome using PCR-analysed microsatellites. |
Volume: |
18 |
Issue: |
14 |
Pages: |
4123-30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chiang PW |
Year: |
1996 |
Journal: |
Mamm Genome |
Title: |
Linkage mapping of murine homolog of the yeast SPT6 gene to MMU11B1. |
Volume: |
7 |
Issue: |
6 |
Pages: |
459-60 |
|
•
•
•
•
•
|
Publication |
First Author: |
Krulová M |
Year: |
1997 |
Journal: |
Genomics |
Title: |
IL-2-induced proliferative response is controlled by loci Cinda1 and Cinda2 on mouse chromosomes 11 and 12: a distinct control of the response induced by different IL-2 concentrations. |
Volume: |
42 |
Issue: |
1 |
Pages: |
11-5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yonebayashi S |
Year: |
2021 |
Journal: |
Front Immunol |
Title: |
Generation of Transgenic Mice that Conditionally Overexpress Tenascin-C. |
Volume: |
12 |
|
Pages: |
620541 |
|
•
•
•
•
•
|
Publication |
First Author: |
IUIS/WHO Subcommittee on Chemokine Nomenclature. |
Year: |
2002 |
Journal: |
J Immunol Methods |
Title: |
Chemokine/chemokine receptor nomenclature. |
Volume: |
262 |
Issue: |
1-2 |
Pages: |
1-3 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hasson T |
Year: |
1996 |
Journal: |
Genomics |
Title: |
Mapping of unconventional myosins in mouse and human. |
Volume: |
36 |
Issue: |
3 |
Pages: |
431-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shanghai Model Organisms Center |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
MGC Data curation in Mouse Genome Informatics |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2016 |
|
Title: |
Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Wellcome Trust Sanger Institute |
Year: |
2009 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
Year: |
2001 |
|
Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Skarnes WC |
Year: |
2011 |
Journal: |
Nature |
Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
Volume: |
474 |
Issue: |
7351 |
Pages: |
337-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Haque NS |
Year: |
2019 |
Journal: |
PLoS One |
Title: |
CC chemokine CCL1 receptor CCR8 mediates conversion of mesenchymal stem cells to embryoid bodies expressing FOXP3+CCR8+ regulatory T cells. |
Volume: |
14 |
Issue: |
7 |
Pages: |
e0218944 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wiener Z |
Year: |
2008 |
Journal: |
Int Immunol |
Title: |
IL-18 induces a marked gene expression profile change and increased Ccl1 (I-309) production in mouse mucosal mast cell homologs. |
Volume: |
20 |
Issue: |
12 |
Pages: |
1565-73 |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
Allele |
Name: |
C-C motif chemokine ligand 1; endonuclease-mediated mutation 2, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
The chemokine CCL1 triggers an AMFR-SPRY1 pathway that promotes differentiation of lung fibroblasts into myofibroblasts and drives pulmonary fibrosis. |
|
•
•
•
•
•
|
Allele |
Name: |
C-C motif chemokine ligand 1; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
•
•
•
•
•
|
Publication |
First Author: |
Molz L |
Year: |
1993 |
Journal: |
EMBO J |
Title: |
Characterization of the fission yeast mcs2 cyclin and its associated protein kinase activity. |
Volume: |
12 |
Issue: |
4 |
Pages: |
1723-32 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Cyclins are eukaryotic proteins that play an active role in controlling nuclear cell division cycles [], and regulate cyclin dependent kinases (CDKs). This entry includes cyclin-H from vertebrates, mcs2 from fission yeast and Ccl1 from budding yeasts. They are cyclins that play a role in cell cycle. They are also subunits forming the core-TFIIH basal transcription factor. Human cyclin-H regulates CDK7, the catalytic subunit of the CDK-activating kinase (CAK) enzymatic complex []. mcs2 posseses kinase activity that can be detected when myelin basic protein (MBP) is provided as an exogenous substrate []. Ccl1 is a regulatory component of the TFIIK complex, which is the protein kinase component of transcription factor IIH (TFIIH). TFIIH is essential for both basal and activated transcription and is involved in nucleotide excision repair (NER) of damaged DNA and in polymerase II transcription []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Gaillard E |
Year: |
2006 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Phosphorylation by PKA potentiates retinoic acid receptor alpha activity by means of increasing interaction with and phosphorylation by cyclin H/cdk7. |
Volume: |
103 |
Issue: |
25 |
Pages: |
9548-53 |
|
•
•
•
•
•
|
Publication |
First Author: |
Knipfer L |
Year: |
2019 |
Journal: |
J Exp Med |
Title: |
A CCL1/CCR8-dependent feed-forward mechanism drives ILC2 functions in type 2-mediated inflammation. |
Volume: |
216 |
Issue: |
12 |
Pages: |
2763-2777 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ritz D |
Year: |
1995 |
Journal: |
Mol Gen Genet |
Title: |
The cycHJKL gene cluster plays an essential role in the biogenesis of c-type cytochromes in Bradyrhizobium japonicum. |
Volume: |
247 |
Issue: |
1 |
Pages: |
27-38 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Within mitochondria and bacteria, a family of related proteins is involved in the assembly of periplasmic c-type cytochromes: these include CycK [], CcmF [, ], NrfE []and CcbS []. These proteins may play a role in guidance of apocytochromes and haem groups for their covalent linkage by the cytochrome-c-haem lyase. Members of the family are probably integral membrane proteins, with up to 16 predicted transmembrane (TM) helices.The gene products of the hel and ccl loci have been shown to be required specifically for the biogenesis of c-type cytochromes in the Gram-negative photosynthetic bacterium Rhodobacter capsulatus. The ccl locus contains two genes, ccl1 and ccl2, each of which possesses typical signal sequences to direct them to the periplasm []. Ccl1 is similar to proteins encoded by chloroplast and mitochondrial genes, suggesting analogous functions in these organelles. It is believed that the hel-encoded proteins are required for the export of haem to the periplasm, where it is subsequently ligated to the c-type apocytochromes []. The CycK and CycL proteins of Bradyrhizobium japonicum share up to 53% amino acid sequence identity with R. capsulatus proteins Cc11 and Cc12 proteins, respectively. CycK and CycL proteins, which are encoded by the cycHJKL-cluster, may form part of a cytochrome c-haem lyase complex whose active site faces the periplasm []. |
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•
•
•
•
•
|
Publication |
First Author: |
Feaver WJ |
Year: |
1997 |
Journal: |
J Biol Chem |
Title: |
Genes for Tfb2, Tfb3, and Tfb4 subunits of yeast transcription/repair factor IIH. Homology to human cyclin-dependent kinase activating kinase and IIH subunits. |
Volume: |
272 |
Issue: |
31 |
Pages: |
19319-27 |
|
•
•
•
•
•
|
Publication |
First Author: |
Renninger ML |
Year: |
2005 |
Journal: |
Exp Dermatol |
Title: |
Increased expression of chemokines in the skin of chronic proliferative dermatitis mutant mice. |
Volume: |
14 |
Issue: |
12 |
Pages: |
906-13 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kobayashi M |
Year: |
2012 |
Journal: |
J Immunol |
Title: |
Role of M2b macrophages in the acceleration of bacterial translocation and subsequent sepsis in mice exposed to whole body [137Cs] γ-irradiation. |
Volume: |
189 |
Issue: |
1 |
Pages: |
296-303 |
|
•
•
•
•
•
|
Publication |
First Author: |
Su SB |
Year: |
2007 |
Journal: |
Invest Ophthalmol Vis Sci |
Title: |
Altered chemokine profile associated with exacerbated autoimmune pathology under conditions of genetic interferon-gamma deficiency. |
Volume: |
48 |
Issue: |
10 |
Pages: |
4616-25 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shigematsu K |
Year: |
2009 |
Journal: |
J Leukoc Biol |
Title: |
Enterococcus faecalis translocation in mice with severe burn injury: a pathogenic role of CCL2 and alternatively activated macrophages (M2aMphi and M2cMphi). |
Volume: |
86 |
Issue: |
4 |
Pages: |
999-1005 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ito M |
Year: |
2019 |
Journal: |
Nature |
Title: |
Brain regulatory T cells suppress astrogliosis and potentiate neurological recovery. |
Volume: |
565 |
Issue: |
7738 |
Pages: |
246-250 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang J |
Year: |
2024 |
Journal: |
Cell Mol Immunol |
Title: |
Targeting the glucocorticoid receptor-CCR8 axis mediated bone marrow T cell sequestration enhances infiltration of anti-tumor T cells in intracranial cancers. |
Volume: |
21 |
Issue: |
10 |
Pages: |
1145-1157 |
|
•
•
•
•
•
|
Publication |
First Author: |
Islam SA |
Year: |
2013 |
Journal: |
J Exp Med |
Title: |
Identification of human CCR8 as a CCL18 receptor. |
Volume: |
210 |
Issue: |
10 |
Pages: |
1889-98 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hoshino A |
Year: |
2007 |
Journal: |
J Immunol |
Title: |
Inhibition of CCL1-CCR8 interaction prevents aggregation of macrophages and development of peritoneal adhesions. |
Volume: |
178 |
Issue: |
8 |
Pages: |
5296-304 |
|
•
•
•
•
•
|
Publication |
First Author: |
Barsheshet Y |
Year: |
2017 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
CCR8+FOXp3+ Treg cells as master drivers of immune regulation. |
Volume: |
114 |
Issue: |
23 |
Pages: |
6086-6091 |
|
•
•
•
•
•
|
Publication |
First Author: |
Davenport B |
Year: |
2020 |
Journal: |
J Immunol |
Title: |
Chemokine Signatures of Pathogen-Specific T Cells II: Memory T Cells in Acute and Chronic Infection. |
Volume: |
205 |
Issue: |
8 |
Pages: |
2188-2206 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
323
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
287
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
327
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Beckman DL |
Year: |
1992 |
Journal: |
Genes Dev |
Title: |
Bacterial cytochromes c biogenesis. |
Volume: |
6 |
Issue: |
2 |
Pages: |
268-83 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hausmann J |
Year: |
2005 |
Journal: |
J Virol |
Title: |
CD8 T cells require gamma interferon to clear borna disease virus from the brain and prevent immune system-mediated neuronal damage. |
Volume: |
79 |
Issue: |
21 |
Pages: |
13509-18 |
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•
•
•
•
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Publication |
First Author: |
Cassidy MF |
Year: |
2022 |
Journal: |
Mol Immunol |
Title: |
Splicing factor SRSF1 controls autoimmune-related molecular pathways in regulatory T cells distinct from FoxP3. |
Volume: |
152 |
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Pages: |
140-152 |
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•
•
•
•
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Publication |
First Author: |
Hintzen C |
Year: |
2008 |
Journal: |
J Immunol |
Title: |
Oncostatin M-induced and constitutive activation of the JAK2/STAT5/CIS pathway suppresses CCL1, but not CCL7 and CCL8, chemokine expression. |
Volume: |
181 |
Issue: |
10 |
Pages: |
7341-9 |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
351
 |
Fragment?: |
false |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
93
 |
Fragment?: |
true |
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•
•
•
•
•
|
Publication |
First Author: |
Guen VJ |
Year: |
2013 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
CDK10/cyclin M is a protein kinase that controls ETS2 degradation and is deficient in STAR syndrome. |
Volume: |
110 |
Issue: |
48 |
Pages: |
19525-30 |
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•
•
•
•
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Publication |
First Author: |
Larochelle S |
Year: |
2007 |
Journal: |
Mol Cell |
Title: |
Requirements for Cdk7 in the assembly of Cdk1/cyclin B and activation of Cdk2 revealed by chemical genetics in human cells. |
Volume: |
25 |
Issue: |
6 |
Pages: |
839-50 |
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•
•
•
•
•
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Publication |
First Author: |
Ko LJ |
Year: |
1997 |
Journal: |
Mol Cell Biol |
Title: |
p53 is phosphorylated by CDK7-cyclin H in a p36MAT1-dependent manner. |
Volume: |
17 |
Issue: |
12 |
Pages: |
7220-9 |
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•
•
•
•
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Publication |
First Author: |
Schneider E |
Year: |
1998 |
Journal: |
Oncogene |
Title: |
Regulation of CAK kinase activity by p53. |
Volume: |
17 |
Issue: |
21 |
Pages: |
2733-41 |
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•
•
•
•
•
|
Publication |
First Author: |
Larochelle S |
Year: |
2006 |
Journal: |
Nat Struct Mol Biol |
Title: |
Dichotomous but stringent substrate selection by the dual-function Cdk7 complex revealed by chemical genetics. |
Volume: |
13 |
Issue: |
1 |
Pages: |
55-62 |
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•
•
•
•
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Publication |
First Author: |
Deshmukh AS |
Year: |
2016 |
Journal: |
Sci Rep |
Title: |
Cdk7 mediates RPB1-driven mRNA synthesis in Toxoplasma gondii. |
Volume: |
6 |
|
Pages: |
35288 |
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•
•
•
•
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Publication |
First Author: |
Devos M |
Year: |
2015 |
Journal: |
Mol Cell Biol |
Title: |
Fission yeast Cdk7 controls gene expression through both its CAK and C-terminal domain kinase activities. |
Volume: |
35 |
Issue: |
9 |
Pages: |
1480-90 |
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•
•
•
•
•
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Publication |
First Author: |
Kaldis P |
Year: |
1996 |
Journal: |
Cell |
Title: |
The Cdk-activating kinase (CAK) from budding yeast. |
Volume: |
86 |
Issue: |
4 |
Pages: |
553-64 |
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•
•
•
•
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Protein Domain |
Type: |
Family |
Description: |
Cyclins are eukaryotic proteins that play an active role in controlling nuclear cell division cycles, and regulate cyclin dependent kinases (CDKs) [].This entry represents several Cyclin families (C, L, Q, T1, T2, and H/Ccl1) and yeast RNA polymerase II holoenzyme cyclin-like subunit (also known as Ssn8/Srb11).Cyclin C can regulate both cell cycle progression and gene transcription. The Cdk8-cyclin C complex is a component of the RNA polymerase II holoenzyme [].Cyclin L is a transcriptional regulator involved in the regulation of RNA polymerase II transcription and participating in regulating the pre-mRNA splicing process [, ].Cyclin Q (also known as Cyclin M) consists of cyclin-related protein FAM58A [].Cyclin-T2 is a regulatory subunit of the cyclin-dependent kinase pair (CDK9/cyclin T) complex [].Cyclin-H from vertebrates, mcs2 from fission yeast and Ccl1 from budding yeasts are cyclins that play a role in cell cycle [].Cyclin-T associates with CDK9 which are subunits of the positive-transcription elongation factor (P-TEFb) [].Ssn8/Srb11 is a component of the SRB8-11 complex (consists of SRB8, SSN2/SRB9, SSN3/SRB10 and SSN8/SRB11), which is a regulatory module of the mediator complex that is involved in regulation of basal and activated RNA polymerase II-dependent transcription [, ]. |
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Protein Domain |
Type: |
Family |
Description: |
Cyclin-dependent kinase 7 (CDK7) is a serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. It is activated by binding to a cyclin; binding to a different cyclin and phosphorylation of another kinase progresses the cell cycle. CDK7 binds cyclin-B and phosphorylates CDK1 during G2-M transition, and phosphorylates CDK2 and binds to cyclins during G1-S transition [, ]. CDK7 phosphorylates and activates p53 following DNA damage [], but CDK7 is then inactivated by p53, which arrests the cell cycle, allowing the cell to recover or undergo apoptosis []. CDK7 is also the catalytic subunit of the CDK-activating kinase (CAK) complex, which also contains cyclin-H (CCNH) and MAT1 [, ]. In turn, the CAK associates with the core-TFIIH to form the TFIIH basal transcription factor [].This entry includes CDK7 from animals, Kin28 from budding yeasts and Crk1 (also known as Mcs6) from fission yeasts. S. pombe possesses two CAKs, the nonessential Csk1 and the essential Mcs6 kinases, corresponding to the yeast Cak1 and the metazoan CDK7, respectively. Mcs6 modulates gene expression through both its CAK and CTD kinase activities []. Kin28 is the closest homologue of CDK7 from budding yeasts. It forms a complex with Ccl1 and Tfb3. This complex associate with TFIIH for transcription regulating activity, but does not display CAK activity []. Instead, Cak1, a single-subunit kinase distantly related to Cdk, catalyzes Cdk activation at both transitions of the budding yeast cell cycle []. |
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Publication |
First Author: |
Page MD |
Year: |
1997 |
Journal: |
Microbiology |
Title: |
The Paracoccus denitrificans ccmA, B and C genes: cloning and sequencing, and analysis of the potential of their products to form a haem or apo- c-type cytochrome transporter. |
Volume: |
143 ( Pt 2) |
|
Pages: |
563-76 |
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•
•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
80
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
142
 |
Fragment?: |
true |
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•
•
•
•
|
Publication |
First Author: |
Bieniasz PD |
Year: |
1999 |
Journal: |
J Virol |
Title: |
Analysis of the effect of natural sequence variation in Tat and in cyclin T on the formation and RNA binding properties of Tat-cyclin T complexes. |
Volume: |
73 |
Issue: |
7 |
Pages: |
5777-86 |
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•
•
•
•
•
|
Publication |
First Author: |
Fu TJ |
Year: |
1999 |
Journal: |
J Biol Chem |
Title: |
Cyclin K functions as a CDK9 regulatory subunit and participates in RNA polymerase II transcription. |
Volume: |
274 |
Issue: |
49 |
Pages: |
34527-30 |
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
192
 |
Fragment?: |
false |
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•
•
•
•
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Publication |
First Author: |
Tirode F |
Year: |
1999 |
Journal: |
Mol Cell |
Title: |
Reconstitution of the transcription factor TFIIH: assignment of functions for the three enzymatic subunits, XPB, XPD, and cdk7. |
Volume: |
3 |
Issue: |
1 |
Pages: |
87-95 |
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