Type |
Details |
Score |
Publication |
First Author: |
Palmer S |
Year: |
1995 |
Journal: |
Nat Genet |
Title: |
A contravention of Ohno's law in mice. |
Volume: |
10 |
Issue: |
4 |
Pages: |
472-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Montini E |
Year: |
1998 |
Journal: |
Genomics |
Title: |
Identification and characterization of a novel serine-threonine kinase gene from the Xp22 region. |
Volume: |
51 |
Issue: |
3 |
Pages: |
427-33 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jentsch TJ |
Year: |
2007 |
Journal: |
J Physiol |
Title: |
Chloride and the endosomal-lysosomal pathway: emerging roles of CLC chloride transporters. |
Volume: |
578 |
Issue: |
Pt 3 |
Pages: |
633-40 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mohammad-Panah R |
Year: |
2009 |
Journal: |
J Cell Sci |
Title: |
An essential role for ClC-4 in transferrin receptor function revealed in studies of fibroblasts derived from Clcn4-null mice. |
Volume: |
122 |
Issue: |
Pt 8 |
Pages: |
1229-37 |
|
•
•
•
•
•
|
Publication |
First Author: |
Montini E |
Year: |
1997 |
Journal: |
Hum Mol Genet |
Title: |
A novel human serine-threonine phosphatase related to the Drosophila retinal degeneration C (rdgC) gene is selectively expressed in sensory neurons of neural crest origin. |
Volume: |
6 |
Issue: |
7 |
Pages: |
1137-45 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wei C |
Year: |
2024 |
Journal: |
Mol Cell |
Title: |
Imprinted X chromosome inactivation at the gamete-to-embryo transition. |
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|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Blair HJ |
Year: |
1995 |
Journal: |
Genomics |
Title: |
High-resolution comparative mapping of the proximal region of the mouse X chromosome. |
Volume: |
28 |
Issue: |
2 |
Pages: |
305-10 |
|
•
•
•
•
•
|
Publication |
First Author: |
de Conciliis L |
Year: |
1998 |
Journal: |
Genomics |
Title: |
Characterization of Cxorf5 (71-7A), a novel human cDNA mapping to Xp22 and encoding a protein containing coiled-coil alpha-helical domains. |
Volume: |
51 |
Issue: |
2 |
Pages: |
243-50 |
|
•
•
•
•
•
|
Publication |
First Author: |
Arnaiz I |
Year: |
2013 |
Journal: |
Reproduction |
Title: |
Changing expression of chloride channels during preimplantation mouse development. |
Volume: |
145 |
Issue: |
1 |
Pages: |
73-84 |
|
•
•
•
•
•
|
Publication |
First Author: |
Means GD |
Year: |
2000 |
Journal: |
Genomics |
Title: |
A transcript map of a 2-Mb BAC contig in the proximal portion of the mouse X chromosome and regional mapping of the scurfy mutation. |
Volume: |
65 |
Issue: |
3 |
Pages: |
213-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu TY |
Year: |
2017 |
Journal: |
Open Biol |
Title: |
Muscle developmental defects in heterogeneous nuclear Ribonucleoprotein A1 knockout mice. |
Volume: |
7 |
Issue: |
1 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Scavuzzo MA |
Year: |
2018 |
Journal: |
Cell Rep |
Title: |
Pancreatic Cell Fate Determination Relies on Notch Ligand Trafficking by NFIA. |
Volume: |
25 |
Issue: |
13 |
Pages: |
3811-3827.e7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Osafune K |
Year: |
2006 |
Journal: |
Development |
Title: |
Identification of multipotent progenitors in the embryonic mouse kidney by a novel colony-forming assay. |
Volume: |
133 |
Issue: |
1 |
Pages: |
151-61 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hirst CS |
Year: |
2015 |
Journal: |
PLoS One |
Title: |
Ion channel expression in the developing enteric nervous system. |
Volume: |
10 |
Issue: |
3 |
Pages: |
e0123436 |
|
•
•
•
•
•
|
Publication |
First Author: |
Harrell MD |
Year: |
2007 |
Journal: |
Physiol Genomics |
Title: |
Large-scale analysis of ion channel gene expression in the mouse heart during perinatal development. |
Volume: |
28 |
Issue: |
3 |
Pages: |
273-83 |
|
•
•
•
•
•
|
Publication |
First Author: |
Centre for Modeling Human Disease |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the NorCOMM project by the Centre for Modeling Human Disease (Cmhd), Institute of Biomaterials & Biomedical Engineering, University of Toronto |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Willnow T |
Year: |
2005 |
Journal: |
Organogenesis |
Title: |
The European renal genome project: an integrated approach towards understanding the genetics of kidney development and disease. |
Volume: |
2 |
Issue: |
2 |
Pages: |
42-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shanghai Model Organisms Center |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
|
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2001 |
|
Title: |
Gene Ontology Annotation by the MGI Curatorial Staff |
|
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
Data Curation Using Mouse Genome Assembly |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2016 |
|
Title: |
Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Lennon G |
Year: |
1999 |
Journal: |
Database Download |
Title: |
WashU-HHMI Mouse EST Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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|
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•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
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|
|
•
•
•
•
•
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
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|
|
•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
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•
•
•
•
•
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Publication |
First Author: |
Wright J |
Year: |
2008 |
Journal: |
Physiol Genomics |
Title: |
Transcriptional adaptation to Clcn5 knockout in proximal tubules of mouse kidney. |
Volume: |
33 |
Issue: |
3 |
Pages: |
341-54 |
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•
•
•
•
•
|
Allele |
Name: |
chloride channel, voltage-sensitive 5; targeted mutation 1, William B Guggino |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout |
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•
•
•
•
•
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HT Experiment |
Series Id: |
GSE10162 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
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•
•
•
•
|
Allele |
Name: |
chloride channel, voltage-sensitive 5; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
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•
•
•
•
|
HT Experiment |
|
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
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•
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DO Term |
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•
•
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Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
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•
•
•
•
•
|
Allele |
Name: |
chloride channel, voltage-sensitive 5; endonuclease-mediated mutation 1, Ora Weisz |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
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•
•
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•
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DO Term |
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•
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DO Term |
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•
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DO Term |
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•
•
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Strain |
Attribute String: |
mutant stock, endonuclease-mediated mutation |
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•
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Publication |
First Author: |
Uwechue IC |
Year: |
1996 |
Journal: |
Genomics |
Title: |
The mouse X-linked developmental mutant, tattered, lies between DXMit55 and Xkh and is associated with hyperkeratinization. |
Volume: |
37 |
Issue: |
2 |
Pages: |
238-41 |
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•
•
•
•
•
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Publication |
First Author: |
Steinmeyer K |
Year: |
1995 |
Journal: |
J Biol Chem |
Title: |
Cloning and functional expression of rat CLC-5, a chloride channel related to kidney disease. |
Volume: |
270 |
Issue: |
52 |
Pages: |
31172-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Günther W |
Year: |
1998 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
ClC-5, the chloride channel mutated in Dent's disease, colocalizes with the proton pump in endocytotically active kidney cells. |
Volume: |
95 |
Issue: |
14 |
Pages: |
8075-80 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Chloride channels (CLCs) constitute an evolutionarily well-conserved family of voltage-gated channels that are structurally unrelated to the other known voltage-gated channels. They are found in organisms ranging from bacteria to yeasts and plants, and also to animals. Their functions in higher animals likely include the regulation of cell volume, control of electrical excitability and trans-epithelial transport [].The first member of the family (CLC-0) was expression-cloned from the electric organ of Torpedo marmorata [], and subsequently nine CLC-like proteins have been cloned from mammals. They are thought to function as multimers of two or more identical or homologous subunits, and they have varying tissue distributions and functional properties. To date, CLC-0, CLC-1, CLC-2, CLC-4 and CLC-5 have been demonstrated to form functional Cl- channels; whether the remaining isoforms do so is either contested or unproven. One possible explanation for the difficulty in expressing activatable Cl- channels is that some of the isoforms may function as Cl- channels of intracellular compartments, rather than of the plasma membrane. However, they are all thought to have a similar transmembrane (TM) topology, initial hydropathy analysis suggesting 13 hydrophobic stretches long enough to form putative TM domains []. Recently, the postulated TM topology has been revised, and it now seems likely that the CLCs have 10 (or possibly 12) TM domains, with both N- and C-termini residing in the cytoplasm [].A number of human disease-causing mutations have been identified in the genes encoding CLCs. Mutations in CLCN1, the gene encoding CLC-1, the major skeletal muscle Cl- channel, lead to both recessively and dominantly-inherited forms of muscle stiffness or myotonia []. Similarly, mutations in CLCN5, which encodes CLC-5, a renal Cl- channel, lead to several forms of inherited kidney stone disease []. These mutations have been demonstrated to reduce or abolish CLC function.CLC-5, with 746 amino acid residues, is a member of the CLC family thatshows most similarity to the CLC-3 and CLC-4 channels, to which it is ~80%identical at the amino acid level. It is predominantly expressed in thekidney, but can be found in the brain and liver []. As mentioned above,mutations in the CLCN5 gene cause certain hereditary kidney stone diseases,including Dent's disease, an X-chromosome linked syndrome characterised byproteinuria, hypercalciuria, and kidney stones (nephrolithiasis), leading toprogressive renal failure. When the native protein is expressed, it givesrises to strongly outwardly-rectifying Cl-currents; however, the mutatedchannel forms show loss-of-function [, ]. Recent studies have suggestedthat CLC-5 may play an important role in endocytosis in renal proximaltubule cells (probably by providing a shunt for the potential generated bythe H+-ATPase), and that disruption of this function may impair endocytosis,accounting for the proteinuria observed in Dent's disease []. |
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•
•
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•
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Publication |
First Author: |
Friedrich T |
Year: |
1999 |
Journal: |
J Biol Chem |
Title: |
Mutational analysis demonstrates that ClC-4 and ClC-5 directly mediate plasma membrane currents. |
Volume: |
274 |
Issue: |
2 |
Pages: |
896-902 |
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
816
 |
Fragment?: |
false |
|
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
746
 |
Fragment?: |
false |
|
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
746
 |
Fragment?: |
false |
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•
•
•
•
|
Publication |
First Author: |
Jentsch TJ |
Year: |
1997 |
Journal: |
Bioessays |
Title: |
Chloride channels: an emerging molecular picture. |
Volume: |
19 |
Issue: |
2 |
Pages: |
117-26 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lehmann-Horn F |
Year: |
1995 |
Journal: |
Hum Mol Genet |
Title: |
Myotonia levior is a chloride channel disorder. |
Volume: |
4 |
Issue: |
8 |
Pages: |
1397-402 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jentsch TJ |
Year: |
1990 |
Journal: |
Nature |
Title: |
Primary structure of Torpedo marmorata chloride channel isolated by expression cloning in Xenopus oocytes. |
Volume: |
348 |
Issue: |
6301 |
Pages: |
510-4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lloyd SE |
Year: |
1996 |
Journal: |
Nature |
Title: |
A common molecular basis for three inherited kidney stone diseases. |
Volume: |
379 |
Issue: |
6564 |
Pages: |
445-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schmidt-Rose T |
Year: |
1997 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Transmembrane topology of a CLC chloride channel. |
Volume: |
94 |
Issue: |
14 |
Pages: |
7633-8 |
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•
•
•
•
|