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Search results 101 to 162 out of 162 for Copa

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Type Details Score
Publication
11431695 | J:70272
First Author: Kibar Z
Year: 2001
Journal: Nat Genet
Title: Ltap, a mammalian homolog of Drosophila Strabismus/Van Gogh, is altered in the mouse neural tube mutant Loop-tail.
Volume: 28
Issue: 3
Pages: 251-5
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Publication
11401431 | J:68343
First Author: Doudney K
Year: 2001
Journal: Genomics
Title: Comparative physical and transcript maps of approximately 1 Mb around loop-tail, a gene for severe neural tube defects on distal mouse chromosome 1 and human chromosome 1q22-q23.
Volume: 72
Issue: 2
Pages: 180-92
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Publication
10051400 | J:52606
First Author: Eddleston J
Year: 1999
Journal: Genomics
Title: Physical and transcriptional map of a 3-Mb region of mouse chromosome 1 containing the gene for the neural tube defect mutant loop-tail (Lp).
Volume: 56
Issue: 2
Pages: 149-59
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Publication
10725249 | J:60984
First Author: Ko MS
Year: 2000
Journal: Development
Title: Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development.
Volume: 127
Issue: 8
Pages: 1737-49
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Publication
- | J:73065
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2001
Title: Gene Ontology Annotation by the MGI Curatorial Staff
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Publication
12904583 | J:85162
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
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Publication
- | J:346132
       
First Author: The Gene Ontology Consortium
Year: 2016
Title: Automatic assignment of GO terms using logical inference, based on on inter-ontology links
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Publication
- | J:80155
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data
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Publication
12520002 | J:91812
First Author: Stryke D
Year: 2003
Journal: Nucleic Acids Res
Title: BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
Volume: 31
Issue: 1
Pages: 278-81
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Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
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Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
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Publication
- | J:72247
       
First Author: DDB, FB, MGI, GOA, ZFIN curators
Year: 2001
Title: Gene Ontology annotation through association of InterPro records with GO terms
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Protein
Q63ZW9
Organism: Mus musculus/domesticus
Length: 1131  
Fragment?: true
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Protein
Q9R0Y3
Organism: Mus musculus/domesticus
Length: 31  
Fragment?: true
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Protein
Q99JW9
Organism: Mus musculus/domesticus
Length: 300  
Fragment?: true
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Protein
Q8R393
Organism: Mus musculus/domesticus
Length: 580  
Fragment?: true
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DO Term
DOID:0081242 | autoimmune interstitial lung, joint, and kidney disease
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Allele
Copa<tm1.1Shum> | MGI:7336745
Name: coatomer protein complex subunit alpha; targeted mutation 1.1, Anthony K Shum
Allele Type: Targeted
Attribute String: Humanized sequence
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Publication
21790191 | -
First Author: Hsiao YM
Year: 2011
Journal: J Agric Food Chem
Title: Functional characterization of copA gene encoding multicopper oxidase in Xanthomonas campestris pv. campestris.
Volume: 59
Issue: 17
Pages: 9290-302
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Publication
27048656 | -
First Author: Vece TJ
Year: 2016
Journal: J Clin Immunol
Title: Copa Syndrome: a Novel Autosomal Dominant Immune Dysregulatory Disease.
Volume: 36
Issue: 4
Pages: 377-387
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Genotype
Genotype
Symbol: Copa/Copa<+>
Background: B6(CBA)-Copa
Zygosity: ht
Has Mutant Allele: true
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Publication
1378398 | -
First Author: Blomberg P
Year: 1992
Journal: EMBO J
Title: Replication control of plasmid R1: RepA synthesis is regulated by CopA RNA through inhibition of leader peptide translation.
Volume: 11
Issue: 7
Pages: 2675-83
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Strain
MGI:7336759 | B6(CBA)-Copa<tm1.1Shum>
Attribute String: mutant strain, targeted mutation
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Genotype
Genotype
Symbol: Copa/Copa
Background: B6(CBA)-Copa
Zygosity: hm
Has Mutant Allele: true
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Publication
18536063 | -
First Author: Djoko KY
Year: 2008
Journal: Chembiochem
Title: Copper resistance in E. coli: the multicopper oxidase PcoA catalyzes oxidation of copper(I) in Cu(I)Cu(II)-PcoC.
Volume: 9
Issue: 10
Pages: 1579-82
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Protein Domain
IPR034282 | CuRO_2_CopA
Type: Domain
Description: CopA is a multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes [, ]. CopA mutant causes a loss of function including copper tolerance and oxidase activity and copA transcription is inducible in the presence of copper [].Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper centre. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to the active site trinuclear copper centre. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper [, , , ].
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Protein Domain
IPR034284 | CuRO_1_CopA
Type: Domain
Description: CopA is a multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes [, ]. CopA mutant causes a loss of function including copper tolerance and oxidase activity and copA transcription is inducible in the presence of copper [].Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper centre. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble oftypes 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to the active site trinuclear copper centre. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3 [, , , ].
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Protein Domain
IPR034279 | CuRO_3_CopA
Type: Domain
Description: CopA is a multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes [, ]. CopA mutant causes a loss of function including copper tolerance and oxidase activity and copA transcription is inducible in the presence of copper [].Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper centre. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to the active site trinuclear copper centre. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3 [, , , ].
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Publication
7917425 | -
First Author: Cooksey DA
Year: 1994
Journal: FEMS Microbiol Rev
Title: Molecular mechanisms of copper resistance and accumulation in bacteria.
Volume: 14
Issue: 4
Pages: 381-6
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Publication
12644235 | -
First Author: Radford DS
Year: 2003
Journal: FEMS Microbiol Lett
Title: CopZ from Bacillus subtilis interacts in vivo with a copper exporting CPx-type ATPase CopA.
Volume: 220
Issue: 1
Pages: 105-12
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Publication
9440521 | -
First Author: Bayle D
Year: 1998
Journal: J Bacteriol
Title: Properties of the P-type ATPases encoded by the copAP operons of Helicobacter pylori and Helicobacter felis.
Volume: 180
Issue: 2
Pages: 317-29
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Protein Domain
IPR000428 | Cu-bd
Type: Family
Description: Proteins in this family are copper ion-binding proteins, including copper chaperone CopZ and COP-associated protein (COPP). They contain a conserved 30-residue HMA domain, which has been found in a number of other heavy metal transport or detoxification proteins []. CopZ is a chaperone that serves for the intracellular sequestration and transport of Cu+, and delivers copper ions to the copper-transporting ATPase CopA []. COPP is part of a cation-transporting system which is associated with copper export out of the cells [].
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Publication
14663075 | -
First Author: Gaballa A
Year: 2003
Journal: Microbiology
Title: Two MerR homologues that affect copper induction of the Bacillus subtilis copZA operon.
Volume: 149
Issue: Pt 12
Pages: 3413-21
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Protein Domain
IPR037392 | YfmP_HTH
Type: Domain
Description: This entry represents the N-terminal HTH (helix-turn-helix) domain of YfmP and related proteins. YfmP is a a transcription regulator that regulates the multidrug efflux protein, YfmO, and indirectly regulates the expression of the Bacillus subtilis copZA operon encoding a metallochaperone, CopZ, and a CPx-type ATPase efflux protein, CopA []. These proteins belong to the MerR superfamily of transcription regulators that promote expression of several stress regulon genes by reconfiguring the spacer between the -35 and -10 promoter elements. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules [].
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Publication
9186507 | J:41273
First Author: Quek HH
Year: 1997
Journal: Cytogenet Cell Genet
Title: Genomic organization and mapping of the human HEP-COP gene (COPA) to 1q.
Volume: 76
Issue: 3-4
Pages: 139-43
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Publication
33397928 | J:300956
First Author: Mukai K
Year: 2021
Journal: Nat Commun
Title: Homeostatic regulation of STING by retrograde membrane traffic to the ER.
Volume: 12
Issue: 1
Pages: 61
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Publication
1548698 | -
First Author: Messerschmidt A
Year: 1992
Journal: J Mol Biol
Title: Refined crystal structure of ascorbate oxidase at 1.9 A resolution.
Volume: 224
Issue: 1
Pages: 179-205
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Publication
16234932 | -
 
First Author: Bento I
Year: 2005
Journal: Dalton Trans
Title: Dioxygen reduction by multi-copper oxidases; a structural perspective.
Issue: 21
Pages: 3507-13
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Publication
1995346 | -
First Author: Ouzounis C
Year: 1991
Journal: FEBS Lett
Title: A structure-derived sequence pattern for the detection of type I copper binding domains in distantly related proteins.
Volume: 279
Issue: 1
Pages: 73-8
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Publication
2404764 | -
First Author: Messerschmidt A
Year: 1990
Journal: Eur J Biochem
Title: The blue oxidases, ascorbate oxidase, laccase and ceruloplasmin. Modelling and structural relationships.
Volume: 187
Issue: 2
Pages: 341-52
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Publication
8091505 | -
First Author: Bull PC
Year: 1994
Journal: Trends Genet
Title: Wilson disease and Menkes disease: new handles on heavy-metal transport.
Volume: 10
Issue: 7
Pages: 246-52
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Publication
12829265 | -
First Author: Brown NL
Year: 2003
Journal: FEMS Microbiol Rev
Title: The MerR family of transcriptional regulators.
Volume: 27
Issue: 2-3
Pages: 145-63
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Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
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