| Type |
Details |
Score |
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_10 |
|
| Specimen Label: |
euxassay_000876_10 |
| Detected: |
true |
| Specimen Num: |
10 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_11 |
|
| Specimen Label: |
euxassay_000876_11 |
| Detected: |
true |
| Specimen Num: |
11 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_12 |
|
| Specimen Label: |
euxassay_000876_12 |
| Detected: |
true |
| Specimen Num: |
12 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_13 |
|
| Specimen Label: |
euxassay_000876_13 |
| Detected: |
true |
| Specimen Num: |
13 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_14 |
|
| Specimen Label: |
euxassay_000876_14 |
| Detected: |
true |
| Specimen Num: |
14 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_15 |
|
| Specimen Label: |
euxassay_000876_15 |
| Detected: |
true |
| Specimen Num: |
15 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_16 |
|
| Specimen Label: |
euxassay_000876_16 |
| Detected: |
true |
| Specimen Num: |
16 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_17 |
|
| Specimen Label: |
euxassay_000876_17 |
| Detected: |
true |
| Specimen Num: |
17 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_18 |
|
| Specimen Label: |
euxassay_000876_18 |
| Detected: |
true |
| Specimen Num: |
18 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_19 |
|
| Specimen Label: |
euxassay_000876_19 |
| Detected: |
true |
| Specimen Num: |
19 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_20 |
|
| Specimen Label: |
euxassay_000876_20 |
| Detected: |
true |
| Specimen Num: |
20 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_21 |
|
| Specimen Label: |
euxassay_000876_21 |
| Detected: |
true |
| Specimen Num: |
21 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691323 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_22 |
|
| Specimen Label: |
euxassay_000876_22 |
| Detected: |
true |
| Specimen Num: |
22 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3506982 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:2762123 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5539945 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:6382 |
|
| Specimen Label: |
GUDMAP:6382 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2018-12-19 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3270322 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:6267309 |
| Age: |
embryonic day 14.5 |
|
|
| Specimen Label: |
Table S1 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3506982 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1797223 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5539945 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:6382 |
|
| Specimen Label: |
GUDMAP:6382 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1697923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_06 |
| Note: |
caudal part |
| Specimen Label: |
euxassay_000876_06 |
| Detected: |
true |
| Specimen Num: |
6 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1697923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_07 |
| Note: |
caudal part |
| Specimen Label: |
euxassay_000876_07 |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1697923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_08 |
| Note: |
caudal part |
| Specimen Label: |
euxassay_000876_08 |
| Detected: |
true |
| Specimen Num: |
8 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1697923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_09 |
| Note: |
caudal part |
| Specimen Label: |
euxassay_000876_09 |
| Detected: |
true |
| Specimen Num: |
9 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1697923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_10 |
| Note: |
caudal part |
| Specimen Label: |
euxassay_000876_10 |
| Detected: |
true |
| Specimen Num: |
10 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1697923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_11 |
| Note: |
caudal part |
| Specimen Label: |
euxassay_000876_11 |
| Detected: |
true |
| Specimen Num: |
11 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1697923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_12 |
| Note: |
caudal part |
| Specimen Label: |
euxassay_000876_12 |
| Detected: |
true |
| Specimen Num: |
12 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1697923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_13 |
| Note: |
caudal part |
| Specimen Label: |
euxassay_000876_13 |
| Detected: |
true |
| Specimen Num: |
13 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1697923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4824034 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_000876_14 |
| Note: |
caudal part |
| Specimen Label: |
euxassay_000876_14 |
| Detected: |
true |
| Specimen Num: |
14 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3506982 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:2870323 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:5539945 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:13329 |
| Note: |
Restricted expression in the mesenchyme of the urethra. Sharp boundary at the bladder neck. |
| Specimen Label: |
GUDMAP:13329 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3506982 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1832123 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5539945 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:6382 |
|
| Specimen Label: |
GUDMAP:6382 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3506982 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Ambiguous |
| Sex: |
Male |
| Emaps: |
EMAPS:1832123 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5539945 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:13329 |
|
| Specimen Label: |
GUDMAP:13329 |
|
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1025381 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2018-12-19 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754722 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:6267309 |
| Age: |
embryonic day 14.5 |
|
|
| Specimen Label: |
Table S1 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3506982 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:2851823 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5539945 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:6382 |
|
| Specimen Label: |
GUDMAP:6382 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3506982 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754021 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:3508421 |
| Age: |
embryonic day 13.5 |
| Image: |
1 |
|
| Specimen Label: |
1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3506982 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:2760523 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5539945 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:6382 |
|
| Specimen Label: |
GUDMAP:6382 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3506982 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3267921 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:3508421 |
| Age: |
embryonic day 13.5 |
| Image: |
1 |
|
| Specimen Label: |
1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3506982 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:2852723 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5539945 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:6382 |
|
| Specimen Label: |
GUDMAP:6382 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3506982 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757721 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:3508421 |
| Age: |
embryonic day 13.5 |
| Image: |
1 |
|
| Specimen Label: |
1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3506982 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:2850023 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5539945 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:6382 |
|
| Specimen Label: |
GUDMAP:6382 |
| Detected: |
true |
| Specimen Num: |
1 |
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| Publication |
| First Author: |
Bai C |
| Year: |
1998 |
| Journal: |
GenBank Submission |
| Title: |
Mus musculus clipper/cleavage and polyadenylation specificity factor 30 kDa subunit homolog mRNA, partial cds |
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| Pages: |
AF033201 |
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| Publication |
| First Author: |
MGI Nomenclature Committee/Homology Group |
| Year: |
1998 |
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| Title: |
MGI/HUGO Nomenclature Homology Determination |
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| Publication |
| First Author: |
Oeschger FM |
| Year: |
2012 |
| Journal: |
Cereb Cortex |
| Title: |
Gene expression analysis of the embryonic subplate. |
| Volume: |
22 |
| Issue: |
6 |
| Pages: |
1343-59 |
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| Publication |
| First Author: |
Cobellis G |
| Year: |
2005 |
| Journal: |
Nucleic Acids Res |
| Title: |
Tagging genes with cassette-exchange sites. |
| Volume: |
33 |
| Issue: |
4 |
| Pages: |
e44 |
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| Publication |
| First Author: |
Wiese CB |
| Year: |
2012 |
| Journal: |
Front Neurosci |
| Title: |
A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract. |
| Volume: |
6 |
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| Pages: |
130 |
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•
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| Publication |
| First Author: |
Guo G |
| Year: |
2010 |
| Journal: |
Dev Cell |
| Title: |
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. |
| Volume: |
18 |
| Issue: |
4 |
| Pages: |
675-85 |
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| Publication |
| First Author: |
Ko MS |
| Year: |
2000 |
| Journal: |
Development |
| Title: |
Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
| Volume: |
127 |
| Issue: |
8 |
| Pages: |
1737-49 |
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•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Mouse Synonym Curation |
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•
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| Publication |
| First Author: |
Gray PA |
| Year: |
2004 |
| Journal: |
Science |
| Title: |
Mouse brain organization revealed through direct genome-scale TF expression analysis. |
| Volume: |
306 |
| Issue: |
5705 |
| Pages: |
2255-7 |
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| Publication |
| First Author: |
GUDMAP Consortium |
| Year: |
2004 |
| Journal: |
www.gudmap.org |
| Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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| Publication |
| First Author: |
Helmholtz Zentrum Muenchen GmbH |
| Year: |
2010 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
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| Publication |
| First Author: |
Zambrowicz BP |
| Year: |
2003 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
| Volume: |
100 |
| Issue: |
24 |
| Pages: |
14109-14 |
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| Publication |
| First Author: |
GemPharmatech |
| Year: |
2020 |
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| Title: |
GemPharmatech Website. |
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| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
| Year: |
2008 |
| Journal: |
Database Download |
| Title: |
Mouse Gene Trap Data Load from dbGSS |
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| Publication |
| First Author: |
Cyagen Biosciences Inc. |
| Year: |
2022 |
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| Title: |
Cyagen Biosciences Website. |
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| Publication |
| First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
| Year: |
2011 |
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| Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
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| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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| Publication |
| First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
| Year: |
2004 |
| Journal: |
Database Release |
| Title: |
Mouse T31 Radiation Hybrid Data Load |
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•
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| Publication |
| First Author: |
Okazaki Y |
| Year: |
2002 |
| Journal: |
Nature |
| Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
| Volume: |
420 |
| Issue: |
6915 |
| Pages: |
563-73 |
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•
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| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2010 |
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| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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| Publication |
| First Author: |
Diez-Roux G |
| Year: |
2011 |
| Journal: |
PLoS Biol |
| Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
e1000582 |
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•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
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| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
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•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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| Publication |
| First Author: |
MGI Genome Annotation Group and UniGene Staff |
| Year: |
2015 |
| Journal: |
Database Download |
| Title: |
MGI-UniGene Interconnection Effort |
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| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
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| Title: |
Annotation inferences using phylogenetic trees |
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•
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| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
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| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
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•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
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| Publication |
| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
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•
•
•
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| Publication |
| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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| Publication |
| First Author: |
Kiefer H |
| Year: |
2009 |
| Journal: |
J Biol Chem |
| Title: |
Inositol 1,4,5-triphosphate receptor-binding protein released with inositol 1,4,5-triphosphate (IRBIT) associates with components of the mRNA 3' processing machinery in a phosphorylation-dependent manner and inhibits polyadenylation. |
| Volume: |
284 |
| Issue: |
16 |
| Pages: |
10694-705 |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
62
 |
| Fragment?: |
false |
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| Publication |
| First Author: |
Tacahashi Y |
| Year: |
2003 |
| Journal: |
Nucleic Acids Res |
| Title: |
Functional dissection of the zinc finger and flanking domains of the Yth1 cleavage/polyadenylation factor. |
| Volume: |
31 |
| Issue: |
6 |
| Pages: |
1744-52 |
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•
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| Publication |
| First Author: |
Sun Y |
| Year: |
2018 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Molecular basis for the recognition of the human AAUAAA polyadenylation signal. |
| Volume: |
115 |
| Issue: |
7 |
| Pages: |
E1419-E1428 |
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| Publication |
| First Author: |
Barnwal RP |
| Year: |
2012 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Structural and biochemical analysis of the assembly and function of the yeast pre-mRNA 3' end processing complex CF I. |
| Volume: |
109 |
| Issue: |
52 |
| Pages: |
21342-7 |
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| Publication |
| First Author: |
Barabino SM |
| Year: |
1997 |
| Journal: |
Genes Dev |
| Title: |
The 30-kD subunit of mammalian cleavage and polyadenylation specificity factor and its yeast homolog are RNA-binding zinc finger proteins. |
| Volume: |
11 |
| Issue: |
13 |
| Pages: |
1703-16 |
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| Publication |
| First Author: |
Nemeroff ME |
| Year: |
1998 |
| Journal: |
Mol Cell |
| Title: |
Influenza virus NS1 protein interacts with the cellular 30 kDa subunit of CPSF and inhibits 3'end formation of cellular pre-mRNAs. |
| Volume: |
1 |
| Issue: |
7 |
| Pages: |
991-1000 |
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| Publication |
| First Author: |
Schönemann L |
| Year: |
2014 |
| Journal: |
Genes Dev |
| Title: |
Reconstitution of CPSF active in polyadenylation: recognition of the polyadenylation signal by WDR33. |
| Volume: |
28 |
| Issue: |
21 |
| Pages: |
2381-93 |
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| Protein Domain |
| Type: |
Family |
| Description: |
This entry includes CPSF4/CPSF4L from humans and Yth1 from yeasts. Most members have several CCCH type zinc finger domains, which are responsible for the nucleotide recognition [, ]. In animals, the CPSF complex is the central complex of the cleavage and polyadenylation (CP) reaction. It carries the catalytic activity for pre-mRNA cleavage, and its interaction with the AAUAAA sequence is essential for cleavage and the AAUAAA dependence of polyadenylation []. It is composed of five subunits: CPSF160, CPSF100, CPSF73 and CPSF30 (also known as CPSF4) and Fip1. CPSF4 has been shown to bind RNA polymers with a preference for poly(U) [, , ]. In humans, CPSF4 has also been shown to interact with influenza A virus NS1 and block processing of pre-mRNAs, thereby preventing nuclear export of host cell mRNAs []. Two subcomplexes are required for both steps in pre-mRNA 3'-end processing in yeast, the cleavage factor I (CF I) and the Cleavage Polyadenylation Factor (CPF), which likewise consists of the cleavage factor II (CF II) and the polyadenylation factor I (PF I). Yth1, the CPSF4 homologue, is an RNA-binding component of the CPF complex. Yth1 interacts with the pre-mRNA and with other CPF subunits, Brr5/Ysh1 and the polyadenylation-specific Fip1 [, ]. |
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| Publication |
| First Author: |
Kaufmann I |
| Year: |
2004 |
| Journal: |
EMBO J |
| Title: |
Human Fip1 is a subunit of CPSF that binds to U-rich RNA elements and stimulates poly(A) polymerase. |
| Volume: |
23 |
| Issue: |
3 |
| Pages: |
616-26 |
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•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
113
 |
| Fragment?: |
false |
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•
•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
153
 |
| Fragment?: |
false |
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•
•
•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
160
 |
| Fragment?: |
false |
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•
•
•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
176
 |
| Fragment?: |
false |
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•
•
•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
228
 |
| Fragment?: |
false |
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•
•
•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
280
 |
| Fragment?: |
false |
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•
•
•
•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
190
 |
| Fragment?: |
false |
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•
•
•
•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
208
 |
| Fragment?: |
true |
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•
•
•
•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
211
 |
| Fragment?: |
false |
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•
•
•
•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
244
 |
| Fragment?: |
false |
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•
•
•
•
•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
269
 |
| Fragment?: |
false |
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•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
243
 |
| Fragment?: |
false |
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•
•
•
•
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