Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754428 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4944995 |
Age: |
postnatal day 7 |
Image: |
g00438 P7 |
|
Specimen Label: |
g00438 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3267228 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4944995 |
Age: |
postnatal day 7 |
Image: |
g00438 P7 |
|
Specimen Label: |
g00438 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1691019 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:4944995 |
Age: |
embryonic day 11.5 |
Image: |
g00438 E11.5 |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g00438 E11.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3284523 |
Pattern: |
Widespread |
Stage: |
TS23 |
Assay Id: |
MGI:4944995 |
Age: |
embryonic day 15.5 |
Image: |
g00438 E15.5 |
|
Specimen Label: |
g00438 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:3284528 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4944995 |
Age: |
postnatal day 7 |
Image: |
g00438 P7 |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g00438 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689619 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:4944995 |
Age: |
embryonic day 11.5 |
Image: |
g00438 E11.5 |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g00438 E11.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3584814 |
Assay Type: |
RNA in situ |
Annotation Date: |
2005-08-30 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1647028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:3585678 |
Age: |
postnatal day 6 |
|
Note: |
Expression was widespread. |
Specimen Label: |
CNS |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3584814 |
Assay Type: |
RNA in situ |
Annotation Date: |
2005-08-30 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603924 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:3585678 |
Age: |
embryonic day 16.0 |
|
Note: |
Expression was widespread. |
Specimen Label: |
Embryo |
Detected: |
true |
Specimen Num: |
9 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3584814 |
Assay Type: |
RNA in situ |
Annotation Date: |
2005-08-30 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1915726 |
Pattern: |
Not Specified |
Stage: |
TS26 |
Assay Id: |
MGI:3585678 |
Age: |
embryonic day 18.0 |
|
Note: |
Expression was detected in the outer neuroblastic layer. |
Specimen Label: |
E18 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3584814 |
Assay Type: |
RNA in situ |
Annotation Date: |
2005-08-30 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1915727 |
Pattern: |
Not Specified |
Stage: |
TS27 |
Assay Id: |
MGI:3585678 |
Age: |
postnatal day 0-1 |
|
Note: |
Expression was detected in the outer neuroblastic layer. |
Specimen Label: |
P0/1 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3584814 |
Assay Type: |
RNA in situ |
Annotation Date: |
2005-08-30 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1915727 |
Pattern: |
Not Specified |
Stage: |
TS27 |
Assay Id: |
MGI:3585678 |
Age: |
postnatal day 2-3 |
|
Note: |
Expression was detected in the outer neuroblastic layer. |
Specimen Label: |
P2/3 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3267328 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4944995 |
Age: |
postnatal day 7 |
Image: |
g00438 P7 |
|
Specimen Label: |
g00438 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3274128 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4944995 |
Age: |
postnatal day 7 |
Image: |
g00438 P7 |
|
Specimen Label: |
g00438 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1609219 |
Pattern: |
Widespread |
Stage: |
TS19 |
Assay Id: |
MGI:4944995 |
Age: |
embryonic day 11.5 |
Image: |
g00438 E11.5 |
|
Specimen Label: |
g00438 E11.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3266028 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4944995 |
Age: |
postnatal day 7 |
Image: |
g00438 P7 |
|
Specimen Label: |
g00438 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754028 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4944995 |
Age: |
postnatal day 7 |
Image: |
g00438 P7 |
|
Specimen Label: |
g00438 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3280923 |
Pattern: |
Widespread |
Stage: |
TS23 |
Assay Id: |
MGI:4944995 |
Age: |
embryonic day 15.5 |
Image: |
g00438 E15.5 |
|
Specimen Label: |
g00438 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3280928 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4944995 |
Age: |
postnatal day 7 |
Image: |
g00438 P7 |
|
Specimen Label: |
g00438 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3266523 |
Pattern: |
Widespread |
Stage: |
TS23 |
Assay Id: |
MGI:4944995 |
Age: |
embryonic day 15.5 |
Image: |
g00438 E15.5 |
|
Specimen Label: |
g00438 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4944995 |
Age: |
embryonic day 15.5 |
Image: |
g00438 E15.5 |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g00438 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886661 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757728 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4944995 |
Age: |
postnatal day 7 |
Image: |
g00438 P7 |
|
Specimen Label: |
g00438 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nishiyama A |
Year: |
2009 |
Journal: |
Cell Stem Cell |
Title: |
Uncovering early response of gene regulatory networks in ESCs by systematic induction of transcription factors. |
Volume: |
5 |
Issue: |
4 |
Pages: |
420-33 |
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•
•
•
•
•
|
Publication |
First Author: |
Bulfone A |
Year: |
2005 |
Journal: |
J Neurosci |
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Telencephalic embryonic subtractive sequences: a unique collection of neurodevelopmental genes. |
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33 |
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•
•
•
•
•
|
Publication |
First Author: |
Okazaki N |
Year: |
2003 |
Journal: |
DNA Res |
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Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. |
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1 |
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35-48 |
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•
•
•
•
•
|
Publication |
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Nat Neurosci |
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A genomic atlas of mouse hypothalamic development. |
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6 |
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•
•
•
•
•
|
Publication |
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UniProt-GOA |
Year: |
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Gene Ontology annotation based on UniPathway vocabulary mapping |
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•
•
•
•
•
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Publication |
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PLoS Biol |
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•
•
•
•
•
|
Publication |
First Author: |
University of California, Davis |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by the University of California, Davis |
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•
•
•
•
•
|
Publication |
First Author: |
Yokoyama S |
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Dev Cell |
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A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |
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836-48 |
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•
•
•
•
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MGI and IMPC |
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Database Release |
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•
•
•
•
•
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Publication |
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2008 |
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Genome Res |
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Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
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•
•
•
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Publication |
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2006 |
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PLoS Biol |
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BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
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Publication |
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The transcriptional landscape of the mammalian genome. |
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•
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Proc Natl Acad Sci U S A |
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Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
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Title: |
GemPharmatech Website. |
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Publication |
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Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
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Journal: |
Database Download |
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Mouse Gene Trap Data Load from dbGSS |
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Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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Publication |
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UniProt-GOA |
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Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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The Jackson Laboratory Mouse Radiation Hybrid Database |
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Database Release |
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Mouse T31 Radiation Hybrid Data Load |
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Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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Automatic Encodes (AutoE) Reference |
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Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Publication |
First Author: |
Oyhenart J |
Year: |
2005 |
Journal: |
Biol Reprod |
Title: |
Putative homeodomain transcription factor 1 interacts with the feminization factor homolog fem1b in male germ cells. |
Volume: |
72 |
Issue: |
4 |
Pages: |
780-7 |
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Interaction Experiment |
Description: |
Mouse Fem1b interacts with and induces ubiquitin-mediated degradation of Ankrd37. |
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Interaction Experiment |
Description: |
Mouse Fem1b interacts with the Nkx3.1 homeoprotein and is required for proper male secondary sexual development. |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
627
 |
Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
761
 |
Fragment?: |
false |
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•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
747
 |
Fragment?: |
false |
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•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
164
 |
Fragment?: |
true |
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•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
761
 |
Fragment?: |
false |
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•
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
747
 |
Fragment?: |
false |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
285
 |
Fragment?: |
true |
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•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
233
 |
Fragment?: |
false |
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•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
154
 |
Fragment?: |
true |
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•
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
272
 |
Fragment?: |
true |
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•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
53
 |
Fragment?: |
false |
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•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
592
 |
Fragment?: |
false |
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•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
708
 |
Fragment?: |
false |
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•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
716
 |
Fragment?: |
false |
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Publication |
First Author: |
Oyhenart J |
Year: |
2003 |
Journal: |
Biol Reprod |
Title: |
Phtf1 is an integral membrane protein localized in an endoplasmic reticulum domain in maturing male germ cells. |
Volume: |
68 |
Issue: |
3 |
Pages: |
1044-53 |
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Protein Domain |
Type: |
Domain |
Description: |
This domain is found in a group of homeodomain containing proteins from animals, including PHTF1/2, and is typically between 101 and 140 amino acids in length. PHTF proteins do not display any sequence similarity to known or predicted proteins, but their conservation among species suggests an essential function. The 84kDa Phtf1 protein is an integral membrane protein, anchored to a cell membrane by six to eight trans-membrane domains, that is associated with a domain of the endoplasmic reticulum (ER) juxtaposed to the Golgi apparatus. It is present during meiosis and spermiogenesis, and, by the end of spermiogenesis, is released from the mature spermatozoon within the residual bodies []. PHTF1 enhances the binding of FEM1B -feminisation homologue 1B - to cell membranes. Fem-1 was initially identified in the signaling pathway for sex determination, as well as being implicated in apoptosis, but its biochemical role is still unclear, and neither FEM1B nor PHTF1 is directly implicated in apoptosis in spermatogenesis. It is the ANK domain of FEM1B that is necessary for the interaction with the N-terminal region of PHTF1 []. |
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