Type |
Details |
Score |
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:3598828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1610528 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1860128 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1842628 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:3276028 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:3276028 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 54 |
|
|
Specimen Label: |
Mouse 235765 |
Detected: |
false |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1684628 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1750328 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1797228 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1928728 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1876828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:1876828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 54 |
|
|
Specimen Label: |
Mouse 235765 |
Detected: |
false |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1832128 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:1832128 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 54 |
|
|
Specimen Label: |
Mouse 235765 |
Detected: |
false |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Weak |
Sex: |
Female |
Emaps: |
EMAPS:3573928 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 54 |
Image: |
Mouse 235765 - Image 99184666 |
Note: |
There is occasional staining in the ganglion cell layer. |
Specimen Label: |
Mouse 235765 - Image 99184666 |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:3599828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:3599828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 54 |
|
|
Specimen Label: |
Mouse 235765 |
Detected: |
false |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1857728 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:1752528 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
|
|
Specimen Label: |
Mouse 199335 |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Weak |
Sex: |
Male |
Emaps: |
EMAPS:3579028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 68 |
Image: |
Mouse 199335 - Image 99187740 |
Note: |
There is scattered expression in the dorsal horns. |
Specimen Label: |
Mouse 199335 - Image 99187740 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425297 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1690623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4825080 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_010858_10 |
|
Specimen Label: |
euxassay_010858_10 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425297 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1690623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4825080 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_010858_11 |
|
Specimen Label: |
euxassay_010858_11 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425297 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1690623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4825080 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_010858_14 |
|
Specimen Label: |
euxassay_010858_14 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425297 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1690623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4825080 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_010858_15 |
|
Specimen Label: |
euxassay_010858_15 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425297 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1690623 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4825080 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_010858_16 |
|
Specimen Label: |
euxassay_010858_16 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:1757728 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 54 |
|
|
Specimen Label: |
Mouse 235765 |
Detected: |
false |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425297 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1755823 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4825080 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_010858_10 |
|
Specimen Label: |
euxassay_010858_10 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4425297 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1755823 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4825080 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_010858_11 |
|
Specimen Label: |
euxassay_010858_11 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2991528 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 54 |
|
|
Specimen Label: |
Mouse 235765 |
Detected: |
false |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Weak |
Sex: |
Female |
Emaps: |
EMAPS:1689428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 54 |
Image: |
Mouse 235765 - Image 99187732 |
Note: |
There is scattered expression in the brain. |
Specimen Label: |
Mouse 235765 - Image 99187732 |
Detected: |
true |
Specimen Num: |
9 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2006-07-27 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
|
Stage: |
TS28 |
Assay Id: |
MGI:3639238 |
Age: |
postnatal day 54 |
|
|
Specimen Label: |
Mouse 235765 |
Detected: |
false |
Specimen Num: |
11 |
|
•
•
•
•
•
|
Publication |
First Author: |
Noegel S |
Year: |
2001 |
Journal: |
GenBank Submission |
Title: |
Mus musculus glycine receptor alpha 3 subunit (Glra3) mRNA, complete cds |
|
|
Pages: |
AF362764 |
|
•
•
•
•
•
|
Publication |
First Author: |
Harvey RJ |
Year: |
2004 |
Journal: |
Science |
Title: |
GlyR alpha3: an essential target for spinal PGE2-mediated inflammatory pain sensitization. |
Volume: |
304 |
Issue: |
5672 |
Pages: |
884-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Manzke T |
Year: |
2010 |
Journal: |
J Clin Invest |
Title: |
Serotonin receptor 1A-modulated phosphorylation of glycine receptor α3 controls breathing in mice. |
Volume: |
120 |
Issue: |
11 |
Pages: |
4118-28 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ivanova E |
Year: |
2006 |
Journal: |
Eur J Neurosci |
Title: |
Characterization of the glycinergic input to bipolar cells of the mouse retina. |
Volume: |
23 |
Issue: |
2 |
Pages: |
350-64 |
|
•
•
•
•
•
|
Publication |
First Author: |
Graham BA |
Year: |
2011 |
Journal: |
J Physiol |
Title: |
Probing glycine receptor stoichiometry in superficial dorsal horn neurones using the spasmodic mouse. |
Volume: |
589 |
Issue: |
Pt 10 |
Pages: |
2459-74 |
|
•
•
•
•
•
|
Publication |
First Author: |
McCracken LM |
Year: |
2017 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Glycine receptor α3 and α2 subunits mediate tonic and exogenous agonist-induced currents in forebrain. |
Volume: |
114 |
Issue: |
34 |
Pages: |
E7179-E7186 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nobles RD |
Year: |
2012 |
Journal: |
J Neurosci |
Title: |
Selective glycine receptor α2 subunit control of crossover inhibition between the on and off retinal pathways. |
Volume: |
32 |
Issue: |
10 |
Pages: |
3321-32 |
|
•
•
•
•
•
|
Publication |
First Author: |
Heinze L |
Year: |
2007 |
Journal: |
J Comp Neurol |
Title: |
Diversity of glycine receptors in the mouse retina: localization of the alpha4 subunit. |
Volume: |
500 |
Issue: |
4 |
Pages: |
693-707 |
|
•
•
•
•
•
|
Publication |
First Author: |
Xiong W |
Year: |
2012 |
Journal: |
J Exp Med |
Title: |
Cannabinoids suppress inflammatory and neuropathic pain by targeting α3 glycine receptors. |
Volume: |
209 |
Issue: |
6 |
Pages: |
1121-34 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mesuret G |
Year: |
2018 |
Journal: |
Respir Physiol Neurobiol |
Title: |
Breathing disturbances in a model of Rett syndrome: A potential involvement of the glycine receptor α3 subunit? |
Volume: |
248 |
|
Pages: |
43-47 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhu L |
Year: |
1999 |
Journal: |
Genomics |
Title: |
Chromosomal mapping of the tankyrase gene in human and mouse. |
Volume: |
57 |
Issue: |
2 |
Pages: |
320-1 |
|
•
•
•
•
•
|
Publication |
First Author: |
Weiss J |
Year: |
2008 |
Journal: |
Mol Cell Neurosci |
Title: |
Glycinergic input of small-field amacrine cells in the retinas of wildtype and glycine receptor deficient mice. |
Volume: |
37 |
Issue: |
1 |
Pages: |
40-55 |
|
•
•
•
•
•
|
Publication |
First Author: |
Majumdar S |
Year: |
2009 |
Journal: |
J Physiol |
Title: |
Glycinergic input of widefield, displaced amacrine cells of the mouse retina. |
Volume: |
587 |
Issue: |
Pt 15 |
Pages: |
3831-49 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kingsmore SF |
Year: |
1994 |
Journal: |
Mamm Genome |
Title: |
Genetic mapping of the glycine receptor alpha 3 subunit on mouse chromosome 8. |
Volume: |
5 |
Issue: |
12 |
Pages: |
831-2 |
|
•
•
•
•
•
|
Publication |
First Author: |
Heck S |
Year: |
1997 |
Journal: |
Brain Res Dev Brain Res |
Title: |
Expression and mRNA splicing of glycine receptor subunits and gephyrin during neuronal differentiation of P19 cells in vitro, studied by RT-PCR and immunocytochemistry. |
Volume: |
98 |
Issue: |
2 |
Pages: |
211-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lynch JW |
Year: |
2009 |
Journal: |
Neuropharmacology |
Title: |
Native glycine receptor subtypes and their physiological roles. |
Volume: |
56 |
Issue: |
1 |
Pages: |
303-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mordel J |
Year: |
2011 |
Journal: |
J Physiol |
Title: |
Activation of glycine receptor phase-shifts the circadian rhythm in neuronal activity in the mouse suprachiasmatic nucleus. |
Volume: |
589 |
Issue: |
Pt 9 |
Pages: |
2287-300 |
|
•
•
•
•
•
|
Publication |
First Author: |
Becker CM |
Year: |
1997 |
Journal: |
Neuroscientist |
Title: |
Glycine receptors: Molecular heterogeneity and implications for disease. |
Volume: |
1 |
Issue: |
3 |
Pages: |
130-41 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kunz PA |
Year: |
2012 |
Journal: |
J Physiol |
Title: |
Glycine receptors support excitatory neurotransmitter release in developing mouse visual cortex. |
Volume: |
590 |
Issue: |
22 |
Pages: |
5749-64 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim H |
Year: |
2022 |
Journal: |
Elife |
Title: |
Rescue of behavioral and electrophysiological phenotypes in a Pitt-Hopkins syndrome mouse model by genetic restoration of Tcf4 expression. |
Volume: |
11 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Derry JM |
Year: |
1991 |
Journal: |
Genomics |
Title: |
Mapping of the glycine receptor alpha 2-subunit gene and the GABAA alpha 3-subunit gene on the mouse X chromosome. |
Volume: |
10 |
Issue: |
3 |
Pages: |
593-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Manceau V |
Year: |
2012 |
Journal: |
PLoS One |
Title: |
The protein kinase KIS impacts gene expression during development and fear conditioning in adult mice. |
Volume: |
7 |
Issue: |
8 |
Pages: |
e43946 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kennedy AJ |
Year: |
2016 |
Journal: |
Cell Rep |
Title: |
Tcf4 Regulates Synaptic Plasticity, DNA Methylation, and Memory Function. |
Volume: |
16 |
Issue: |
10 |
Pages: |
2666-2685 |
|
•
•
•
•
•
|
Publication |
First Author: |
Guo Z |
Year: |
2012 |
Journal: |
J Neurosci |
Title: |
Tlx1/3 and Ptf1a control the expression of distinct sets of transmitter and peptide receptor genes in the developing dorsal spinal cord. |
Volume: |
32 |
Issue: |
25 |
Pages: |
8509-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Boyle MP |
Year: |
2011 |
Journal: |
J Comp Neurol |
Title: |
Cell-type-specific consequences of Reelin deficiency in the mouse neocortex, hippocampus, and amygdala. |
Volume: |
519 |
Issue: |
11 |
Pages: |
2061-89 |
|
•
•
•
•
•
|
Publication |
First Author: |
Deltagen Inc |
Year: |
2005 |
Journal: |
MGI Direct Data Submission |
Title: |
NIH initiative supporting placement of Deltagen, Inc. mice into public repositories |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2016 |
|
Title: |
Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Thompson CL |
Year: |
2014 |
Journal: |
Neuron |
Title: |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
Volume: |
83 |
Issue: |
2 |
Pages: |
309-323 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wellcome Trust Sanger Institute |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
Year: |
2001 |
|
Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Skarnes WC |
Year: |
2011 |
Journal: |
Nature |
Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
Volume: |
474 |
Issue: |
7351 |
Pages: |
337-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Nikolic Z |
Year: |
1998 |
Journal: |
J Biol Chem |
Title: |
The human glycine receptor subunit alpha3. Glra3 gene structure, chromosomal localization, and functional characterization of alternative transcripts. |
Volume: |
273 |
Issue: |
31 |
Pages: |
19708-14 |
|
•
•
•
•
•
|
Allele |
Name: |
hypoxanthine phosphoribosyltransferase 1; targeted mutation 1, Jochen C Meier |
Allele Type: |
Targeted |
Attribute String: |
Conditional ready, Inserted expressed sequence |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Hprt1/? Pvalb/Pvalb<+> |
Background: |
involves: 129P2/OlaHsd * C57BL/6J |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Hprt1/? Tg(Camk2a-cre)2Gsc/? |
Background: |
involves: 129P2/OlaHsd * C57BL/6J * FVB/N |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Winkelmann A |
Year: |
2014 |
Journal: |
J Clin Invest |
Title: |
Changes in neural network homeostasis trigger neuropsychiatric symptoms. |
Volume: |
124 |
Issue: |
2 |
Pages: |
696-711 |
|
•
•
•
•
•
|
Publication |
First Author: |
Çaliskan G |
Year: |
2016 |
Journal: |
Cereb Cortex |
Title: |
Identification of Parvalbumin Interneurons as Cellular Substrate of Fear Memory Persistence. |
Volume: |
26 |
Issue: |
5 |
Pages: |
2325-2340 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Neurotransmitter ligand-gated ion channels are transmembrane receptor-ion channel complexes that open transiently upon binding of specific ligands, allowing rapid transmission of signals at chemical synapses [, ]. Five of these ion channel receptor families have been shown to form a sequence-related superfamily:Nicotinic acetylcholine receptor (AchR), an excitatory cation channel in vertebrates and invertebrates; in vertebrate motor endplates it is composed of alpha, beta, gamma and delta/epsilon subunits; in neurons it is composed of alpha and non-alpha (or beta) subunits [].Glycine receptor, an inhibitory chloride ion channel composed of alpha and beta subunits [].Gamma-aminobutyric acid (GABA) receptor, an inhibitory chloride ion channel; at least four types of subunits (alpha, beta, gamma and delta) are known [].Serotonin 5HT3 receptor, of which there are seven major types (5HT3-5HT7) [].Glutamate receptor, an excitatory cation channel of which at least three types have been described (kainate, N-methyl-D-aspartate (NMDA) and quisqualate) [].These receptors possess a pentameric structure (made up of varying subunits), surrounding a central pore. All known sequences of subunits from neurotransmitter-gated ion-channels are structurally related. They are composed of a large extracellular glycosylated N-terminal ligand-binding domain, followed by three hydrophobic transmembrane regions which form the ionic channel, followed by an intracellular region of variable length. A fourth hydrophobic region is found at the C-terminal of the sequence [, ].Glycine is a major inhibitory neurotransmitter (NT) in the adult vertebratecentral nervous system (CNS). Glycinergic synapses have a well-establishedrole in the processing of motor and sensory information that controlsmovement, vision and audition []. This action of glycine is mediatedthrough its interaction with the glycine receptor (GlyR): an intrinsicchloride channel is opened in response to agonist binding. The subsequentinflux of anions prevents membrane depolarisation and neuronal firinginduced by excitatory NTs. Strychnine acts as a competitive antagonist ofglycine binding, thereby reducing the activity of inhibitory neurones.Poisoning with strychnine is characterised by over-excitation, muscle spasmsand convulsions. Whilst glycine is the principal physiological agonist atGlyRs, taurine and beta-alanine also behave as agonists []. Compounds thatmodulate GlyR activity include zinc, some alcohols and anaesthetics,picrotoxin, cocaine and some anticonvulsants. GlyRs were thought for sometime to be localised exclusively in the brain stem and spinal cord, but havesince been found to be expressed more widely, including the cochlear nuclei,cerebellar cortex and forebrain [].GlyRs belong to the ligand-gated ion channel family, which also includes theinhibitory gamma-aminobutyric acid type A (GABAA) and excitatory nicotinicacetylcholine (nACh) and serotonin type 3 (5-HT3) receptors [].Affinity-purified GlyR was found to contain two glycosylated membraneproteins of 48kDa and 56kDa, corresponding to alpha and beta subunits,respectively. Four genes encoding alpha subunits have been identified (GLRA1to 4), together with a single beta polypeptide (GLRB). The heterogeneity ofalpha subunits is further increased by alternative exon splicing, yieldingtwo isoforms of GLRA1 to 3 []. The characteristics of different GlyRsubtypes, therefore, can be largely explained by their GLRA content.GlyRs are generally believed to adopt a pentameric structure in vivo: fivesubunits assemble to form a ring structure with a central pore. Typically, astoichiometry of 3:2 (alpha:beta) is observed []. GlyR subunits share ahigh overall level of sequence similarity both with themselves and with thesubunits of the GABAA and nACh receptors. Four highly conserved segmentshave been proposed to correspond to transmembrane (TM) alpha helices (TM1-4), the second of which is thought to contribute to the pore wall []. A long extracellular N-terminal segment precedes TM1 and a long cytoplasmic loop links TM3 and 4. Short cytoplasmic and extracellular loops join TM1-2 andTM2-3, respectively, and a short C-terminal sequence follows TM4. Studiesusing radiolabelled strychnine have shown the alpha subunit to beresponsible for ligand binding, the critical residues for this interaction lying within the N-terminal domain. The beta subunit plays a structuralrole, contributing one of its TM domains to the pore wall as well as playinga putative role in postsynaptic clustering of the receptor.In several mammalian species, defects in glycinergic transmission areassociated with complex motor disorders. Mutations in the gene encodingGLRA1 give rise to hyperplexia, or startle disease []. This ischaracterised by muscular spasms in response to unexpected light or noisestimuli, similar to the symptoms of sublethal doses of strychnine. Themutations result in amino acid substitutions within the TM1-2 and TM3-4loops, suggesting that these regions are involved in the transduction ofligand binding into channel activation.GLRA3 is expressed in thecerebellum, olfactory bulb and hippocampus. GLRA3 trancripts, together withGLRA1, predominate in the postnatal CNS, replacing GLRA2, which is moreabundant in embryonic and neonatal neurones. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
464
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
480
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Betz H |
Year: |
1999 |
Journal: |
Ann N Y Acad Sci |
Title: |
Structure and functions of inhibitory and excitatory glycine receptors. |
Volume: |
868 |
|
Pages: |
667-76 |
|
•
•
•
•
•
|
Publication |
First Author: |
López-Corcuera B |
Year: |
2001 |
Journal: |
Mol Membr Biol |
Title: |
Glycine neurotransmitter transporters: an update. |
Volume: |
18 |
Issue: |
1 |
Pages: |
13-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Legendre P |
Year: |
2001 |
Journal: |
Cell Mol Life Sci |
Title: |
The glycinergic inhibitory synapse. |
Volume: |
58 |
Issue: |
5-6 |
Pages: |
760-93 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sato C |
Year: |
1992 |
Journal: |
Biochem Biophys Res Commun |
Title: |
Proposed tertiary structure of the sodium channel. |
Volume: |
186 |
Issue: |
2 |
Pages: |
1158-67 |
|
•
•
•
•
•
|
Publication |
First Author: |
Leite JF |
Year: |
2001 |
Journal: |
Mol Cell Neurosci |
Title: |
Structure of ligand-gated ion channels: critical assessment of biochemical data supports novel topology. |
Volume: |
17 |
Issue: |
5 |
Pages: |
777-92 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kofuji P |
Year: |
1991 |
Journal: |
J Neurochem |
Title: |
Generation of two forms of the gamma-aminobutyric acidA receptor gamma 2-subunit in mice by alternative splicing. |
Volume: |
56 |
Issue: |
2 |
Pages: |
713-5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wagner K |
Year: |
1991 |
Journal: |
J Biol Chem |
Title: |
Determination of the tyrosine phosphorylation sites of the nicotinic acetylcholine receptor. |
Volume: |
266 |
Issue: |
35 |
Pages: |
23784-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yan D |
Year: |
1999 |
Journal: |
J Biol Chem |
Title: |
Structural features of the ligand-binding domain of the serotonin 5HT3 receptor. |
Volume: |
274 |
Issue: |
9 |
Pages: |
5537-41 |
|
•
•
•
•
•
|
Publication |
First Author: |
Millar NS |
Year: |
2008 |
Journal: |
Mol Membr Biol |
Title: |
Assembly and trafficking of nicotinic acetylcholine receptors (Review). |
Volume: |
25 |
Issue: |
4 |
Pages: |
279-92 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lynch JW |
Year: |
2004 |
Journal: |
Physiol Rev |
Title: |
Molecular structure and function of the glycine receptor chloride channel. |
Volume: |
84 |
Issue: |
4 |
Pages: |
1051-95 |
|
•
•
•
•
•
|
Publication |
First Author: |
Olsen RW |
Year: |
2009 |
Journal: |
Neuropharmacology |
Title: |
GABA A receptors: subtypes provide diversity of function and pharmacology. |
Volume: |
56 |
Issue: |
1 |
Pages: |
141-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wollmuth LP |
Year: |
2004 |
Journal: |
Trends Neurosci |
Title: |
Structure and gating of the glutamate receptor ion channel. |
Volume: |
27 |
Issue: |
6 |
Pages: |
321-8 |
|
•
•
•
•
•
|