Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:7662996 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-07-18 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1716827 |
|
Stage: |
TS27 |
Assay Id: |
MGI:7666108 |
Age: |
postnatal day 1 |
Image: |
1 |
|
Specimen Label: |
PN1 |
Detected: |
false |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7662996 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-07-18 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1716828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7666108 |
Age: |
postnatal day 7 |
Image: |
1 |
|
Specimen Label: |
PN7 |
Detected: |
false |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7662996 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-07-18 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1716828 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7666108 |
Age: |
postnatal day 21 |
Image: |
1 |
|
Specimen Label: |
PN21 |
Detected: |
false |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7662996 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-07-18 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3603128 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7666108 |
Age: |
postnatal adult |
Image: |
1 |
|
Specimen Label: |
Body m |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7662996 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-07-18 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689428 |
|
Stage: |
TS28 |
Assay Id: |
MGI:7666108 |
Age: |
postnatal adult |
Image: |
1 |
|
Specimen Label: |
Brain m |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4844905 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-12-22 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1619817 |
Pattern: |
Not Specified |
Stage: |
TS17 |
Assay Id: |
MGI:4848712 |
Age: |
embryonic day 10.5 |
|
|
Specimen Label: |
Table S4 - E10.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4844905 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-12-22 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1619819 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:4848712 |
Age: |
embryonic day 11.5 |
|
|
Specimen Label: |
Table S4 - E11.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:2357386 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-06-25 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271122 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:7660698 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
Supplementary table 2 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:2357386 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-08-22 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3271122 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:7711580 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
Supplementary Table 3 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4844905 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-12-22 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1619419 |
Pattern: |
Not Specified |
Stage: |
TS19 |
Assay Id: |
MGI:4848712 |
Age: |
embryonic day 11.5 |
|
Note: |
Staining is present in the otic pit. |
Specimen Label: |
Table S4 - E11.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:2357386 |
Assay Type: |
RNA in situ |
Annotation Date: |
2023-03-15 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3268622 |
Pattern: |
Regionally restricted |
Stage: |
TS22 |
Assay Id: |
MGI:7444259 |
Age: |
embryonic day 14.5 |
Image: |
S1C |
Note: |
Expression was detected throughout the trabecular endocardium. |
Specimen Label: |
S1C |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4844905 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-12-22 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1666917 |
Pattern: |
Not Specified |
Stage: |
TS17 |
Assay Id: |
MGI:4848712 |
Age: |
embryonic day 10.5 |
|
Note: |
Staining is present in the otic pit. |
Specimen Label: |
Table S4 - E10.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:2357386 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-06-25 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754722 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:7660698 |
Age: |
embryonic day 14.5 |
|
Note: |
Ventricular zone expression was greater than in the cortical plate. |
Specimen Label: |
Supplementary table 2 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:2357386 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-08-22 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754722 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:7711580 |
Age: |
embryonic day 14.5 |
|
Note: |
Ventricular zone expression was greater than in the cortical plate. |
Specimen Label: |
Supplementary Table 3 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:2357386 |
Assay Type: |
RNA in situ |
Annotation Date: |
2023-03-15 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1786922 |
Pattern: |
Regionally restricted |
Stage: |
TS22 |
Assay Id: |
MGI:7444259 |
Age: |
embryonic day 14.5 |
Image: |
S1C |
Note: |
Expression was detected throughout the valve endothelium. |
Specimen Label: |
S1C |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:2357386 |
Assay Type: |
RNA in situ |
Annotation Date: |
2023-03-15 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3805122 |
Pattern: |
Regionally restricted |
Stage: |
TS22 |
Assay Id: |
MGI:7444259 |
Age: |
embryonic day 14.5 |
Image: |
S1C |
Note: |
Expression was detected throughout the trabecular endocardium. |
Specimen Label: |
S1C |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kislinger T |
Year: |
2006 |
Journal: |
Cell |
Title: |
Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling. |
Volume: |
125 |
Issue: |
1 |
Pages: |
173-86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bettini ML |
Year: |
2012 |
Journal: |
Immunity |
Title: |
Loss of epigenetic modification driven by the Foxp3 transcription factor leads to regulatory T cell insufficiency. |
Volume: |
36 |
Issue: |
5 |
Pages: |
717-30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Potthoff MJ |
Year: |
2007 |
Journal: |
J Clin Invest |
Title: |
Histone deacetylase degradation and MEF2 activation promote the formation of slow-twitch myofibers. |
Volume: |
117 |
Issue: |
9 |
Pages: |
2459-67 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chang S |
Year: |
2004 |
Journal: |
Mol Cell Biol |
Title: |
Histone deacetylases 5 and 9 govern responsiveness of the heart to a subset of stress signals and play redundant roles in heart development. |
Volume: |
24 |
Issue: |
19 |
Pages: |
8467-76 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dai YS |
Year: |
2005 |
Journal: |
Mol Cell Biol |
Title: |
The DnaJ-related factor Mrj interacts with nuclear factor of activated T cells c3 and mediates transcriptional repression through class II histone deacetylase recruitment. |
Volume: |
25 |
Issue: |
22 |
Pages: |
9936-48 |
|
•
•
•
•
•
|
Publication |
First Author: |
Verdin E |
Year: |
2003 |
Journal: |
Trends Genet |
Title: |
Class II histone deacetylases: versatile regulators. |
Volume: |
19 |
Issue: |
5 |
Pages: |
286-93 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ferreira RC |
Year: |
2017 |
Journal: |
J Biol Chem |
Title: |
Histone Deacetylase 1 Is Essential for Rod Photoreceptor Differentiation by Regulating Acetylation at Histone H3 Lysine 9 and Histone H4 Lysine 12 in the Mouse Retina. |
Volume: |
292 |
Issue: |
6 |
Pages: |
2422-2440 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cao D |
Year: |
2005 |
Journal: |
Mol Cell Biol |
Title: |
Modulation of smooth muscle gene expression by association of histone acetyltransferases and deacetylases with myocardin. |
Volume: |
25 |
Issue: |
1 |
Pages: |
364-76 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim SJ |
Year: |
2022 |
Journal: |
Nature |
Title: |
Kinase signalling in excitatory neurons regulates sleep quantity and depth. |
Volume: |
612 |
Issue: |
7940 |
Pages: |
512-518 |
|
•
•
•
•
•
|
Publication |
First Author: |
Feng Q |
Year: |
2020 |
Journal: |
Autophagy |
Title: |
MAPT/Tau accumulation represses autophagy flux by disrupting IST1-regulated ESCRT-III complex formation: a vicious cycle in Alzheimer neurodegeneration. |
Volume: |
16 |
Issue: |
4 |
Pages: |
641-658 |
|
•
•
•
•
•
|
Publication |
First Author: |
Winnay JN |
Year: |
2006 |
Journal: |
Mol Endocrinol |
Title: |
Adrenocorticotropic hormone-mediated signaling cascades coordinate a cyclic pattern of steroidogenic factor 1-dependent transcriptional activation. |
Volume: |
20 |
Issue: |
1 |
Pages: |
147-66 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tou L |
Year: |
2004 |
Journal: |
Mol Cell Biol |
Title: |
Regulation of mammalian epithelial differentiation and intestine development by class I histone deacetylases. |
Volume: |
24 |
Issue: |
8 |
Pages: |
3132-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lenoir O |
Year: |
2011 |
Journal: |
Diabetes |
Title: |
Specific control of pancreatic endocrine β- and δ-cell mass by class IIa histone deacetylases HDAC4, HDAC5, and HDAC9. |
Volume: |
60 |
Issue: |
11 |
Pages: |
2861-71 |
|
•
•
•
•
•
|
Publication |
First Author: |
Vega RB |
Year: |
2004 |
Journal: |
Cell |
Title: |
Histone deacetylase 4 controls chondrocyte hypertrophy during skeletogenesis. |
Volume: |
119 |
Issue: |
4 |
Pages: |
555-66 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lazaro JB |
Year: |
2002 |
Journal: |
Genes Dev |
Title: |
Cyclin D-cdk4 activity modulates the subnuclear localization and interaction of MEF2 with SRC-family coactivators during skeletal muscle differentiation. |
Volume: |
16 |
Issue: |
14 |
Pages: |
1792-805 |
|
•
•
•
•
•
|
Publication |
First Author: |
Witt O |
Year: |
2009 |
Journal: |
Cancer Lett |
Title: |
HDAC family: What are the cancer relevant targets? |
Volume: |
277 |
Issue: |
1 |
Pages: |
8-21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tiwari S |
Year: |
2014 |
Journal: |
BMC Dev Biol |
Title: |
Histone deacetylase expression patterns in developing murine optic nerve. |
Volume: |
14 |
|
Pages: |
30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shang Y |
Year: |
2013 |
Journal: |
PLoS Biol |
Title: |
Transcriptional corepressors HIPK1 and HIPK2 control angiogenesis via TGF-β-TAK1-dependent mechanism. |
Volume: |
11 |
Issue: |
4 |
Pages: |
e1001527 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhou P |
Year: |
2013 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Interrogating translational efficiency and lineage-specific transcriptomes using ribosome affinity purification. |
Volume: |
110 |
Issue: |
38 |
Pages: |
15395-400 |
|
•
•
•
•
•
|
Publication |
First Author: |
Richard AF |
Year: |
2011 |
Journal: |
Dev Biol |
Title: |
Genesis of muscle fiber-type diversity during mouse embryogenesis relies on Six1 and Six4 gene expression. |
Volume: |
359 |
Issue: |
2 |
Pages: |
303-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Franco CA |
Year: |
2008 |
Journal: |
Dev Cell |
Title: |
Serum response factor is required for sprouting angiogenesis and vascular integrity. |
Volume: |
15 |
Issue: |
3 |
Pages: |
448-61 |
|
•
•
•
•
•
|
Publication |
First Author: |
Elsen GE |
Year: |
2018 |
Journal: |
Front Neurosci |
Title: |
The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1. |
Volume: |
12 |
|
Pages: |
571 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ahuja N |
Year: |
2022 |
Journal: |
Dev Biol |
Title: |
Endothelial Cyp26b1 restrains murine heart valve growth during development. |
Volume: |
486 |
|
Pages: |
81-95 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tang F |
Year: |
2011 |
Journal: |
PLoS One |
Title: |
Deterministic and stochastic allele specific gene expression in single mouse blastomeres. |
Volume: |
6 |
Issue: |
6 |
Pages: |
e21208 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yokoyama S |
Year: |
2009 |
Journal: |
Dev Cell |
Title: |
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |
Volume: |
17 |
Issue: |
6 |
Pages: |
836-48 |
|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators, MGI curators |
Year: |
2001 |
|
Title: |
Gene Ontology annotation based on Enzyme Commission mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
FANTOM2 Data Curation in Mouse Genome Informatics |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bedogni F |
Year: |
2021 |
Journal: |
Front Mol Neurosci |
Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
Volume: |
14 |
|
Pages: |
686034 |
|
•
•
•
•
•
|
Publication |
First Author: |
International Knockout Mouse Consortium |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of modified allele data from IKMC and creation of new knockout alleles |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
International Mouse Strain Resource |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Helmholtz Zentrum Muenchen GmbH |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
|
•
•
•
•
•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
2022 |
|
Title: |
Cyagen Biosciences Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Allele |
Name: |
histone deacetylase 7; endonuclease-mediated mutation 1, David A Hafler |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Humanized sequence |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
HDAC3 and HDAC7 have opposite effects on osteoclast differentiation. |
|
•
•
•
•
•
|
Publication |
First Author: |
Dressel U |
Year: |
2001 |
Journal: |
J Biol Chem |
Title: |
A dynamic role for HDAC7 in MEF2-mediated muscle differentiation. |
Volume: |
276 |
Issue: |
20 |
Pages: |
17007-13 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pham L |
Year: |
2011 |
Journal: |
J Biol Chem |
Title: |
HDAC3 and HDAC7 have opposite effects on osteoclast differentiation. |
Volume: |
286 |
Issue: |
14 |
Pages: |
12056-65 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fischle W |
Year: |
2002 |
Journal: |
Mol Cell |
Title: |
Enzymatic activity associated with class II HDACs is dependent on a multiprotein complex containing HDAC3 and SMRT/N-CoR. |
Volume: |
9 |
Issue: |
1 |
Pages: |
45-57 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kirsh O |
Year: |
2002 |
Journal: |
EMBO J |
Title: |
The SUMO E3 ligase RanBP2 promotes modification of the HDAC4 deacetylase. |
Volume: |
21 |
Issue: |
11 |
Pages: |
2682-91 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chang S |
Year: |
2005 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
An expression screen reveals modulators of class II histone deacetylase phosphorylation. |
Volume: |
102 |
Issue: |
23 |
Pages: |
8120-5 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This group represents eukaryotic type class II histone deacetylases (), such as HDAC4, HDAC5, HDAC7 and HDAC9 [, , ]. These enzymes are responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. Histone acetyltransferases (HATs) cooperate with histone deacetylases to establish and maintain specific patterns of histone acetylation. |
|
•
•
•
•
•
|
Publication |
First Author: |
Di Giorgio E |
Year: |
2013 |
Journal: |
Mol Cell Biol |
Title: |
MEF2 is a converging hub for histone deacetylase 4 and phosphatidylinositol 3-kinase/Akt-induced transformation. |
Volume: |
33 |
Issue: |
22 |
Pages: |
4473-91 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
588
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
565
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
588
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
560
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
114
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
544
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
575
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Jensen ED |
Year: |
2009 |
Journal: |
J Biol Chem |
Title: |
Bone morphogenic protein 2 activates protein kinase D to regulate histone deacetylase 7 localization and repression of Runx2. |
Volume: |
284 |
Issue: |
4 |
Pages: |
2225-34 |
|
•
•
•
•
•
|
Publication |
First Author: |
Meyers CMG |
Year: |
2022 |
Journal: |
Bone |
Title: |
Histone deacetylase 5 is a phosphorylation substrate of protein kinase D in osteoclasts. |
Volume: |
159 |
|
Pages: |
116393 |
|
•
•
•
•
•
|
Publication |
First Author: |
Penrod RD |
Year: |
2018 |
Journal: |
Addict Biol |
Title: |
Novel role and regulation of HDAC4 in cocaine-related behaviors. |
Volume: |
23 |
Issue: |
2 |
Pages: |
653-664 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lemercier C |
Year: |
2002 |
Journal: |
J Biol Chem |
Title: |
Class II histone deacetylases are directly recruited by BCL6 transcriptional repressor. |
Volume: |
277 |
Issue: |
24 |
Pages: |
22045-52 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sinnett-Smith J |
Year: |
2014 |
Journal: |
Am J Physiol Cell Physiol |
Title: |
Protein kinase D1 mediates class IIa histone deacetylase phosphorylation and nuclear extrusion in intestinal epithelial cells: role in mitogenic signaling. |
Volume: |
306 |
Issue: |
10 |
Pages: |
C961-71 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
158
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
175
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
112
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
262
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1076
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1113
 |
Fragment?: |
false |
|
•
•
•
•
•
|