Type |
Details |
Score |
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1603920 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:6691021 |
Age: |
embryonic day 12.5 |
Image: |
JAX_1470425 |
|
Specimen Label: |
JAX_1470425 |
Detected: |
true |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1603920 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:6691021 |
Age: |
embryonic day 12.5 |
Image: |
JAX_1470426 |
|
Specimen Label: |
JAX_1470426 |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:912268 |
Assay Type: |
RNA in situ |
Annotation Date: |
2019-01-18 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3274322 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:6273844 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
Table S1 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5695578 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2015-11-12 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1624717 |
Pattern: |
Regionally restricted |
Stage: |
TS17 |
Assay Id: |
MGI:5695585 |
Age: |
embryonic day 10.5 |
Image: |
4A |
Note: |
Expression is along the basal surface of the intestinal epithelium. |
Specimen Label: |
4A |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5695578 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2015-11-12 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1608624 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:5695585 |
Age: |
embryonic day 16.5 |
Image: |
9B |
Note: |
Expression is mainly at the apical cytoplasm. |
Specimen Label: |
9B |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6449100 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2020-08-12 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1608613 |
Pattern: |
Regionally restricted |
Stage: |
TS13 |
Assay Id: |
MGI:6449639 |
Age: |
embryonic day 8.5 |
Image: |
4G |
Note: |
Expression redistributed to apical cytoplasm of visceral endoderm. |
Specimen Label: |
4G |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6449100 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2020-08-12 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1885217 |
Pattern: |
Regionally restricted |
Stage: |
TS17 |
Assay Id: |
MGI:6449639 |
Age: |
embryonic day 10.5 |
Image: |
7a |
Note: |
Expression more evenly distributed throughout intestinal cells; slightly more concentrated along basal surface of epithelium. |
Specimen Label: |
7a |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6449100 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2020-08-12 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3102528 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:6449639 |
Age: |
postnatal adult |
Image: |
4C/D |
Note: |
In later-stage oocytes, expression concentrated in cortical cytoplasm. |
Specimen Label: |
4C/D |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5695578 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2015-11-12 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3592917 |
Pattern: |
Not Specified |
Stage: |
TS17 |
Assay Id: |
MGI:5695585 |
Age: |
embryonic day 10.5 |
Image: |
9A |
Note: |
Expression is mainly at the apical cytoplasm. |
Specimen Label: |
9A |
Detected: |
true |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6449100 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2020-08-12 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3592917 |
Pattern: |
Regionally restricted |
Stage: |
TS17 |
Assay Id: |
MGI:6449639 |
Age: |
embryonic day 10.5 |
Image: |
4H |
Note: |
Localization of expression to apical surface more prominent by E10.5. |
Specimen Label: |
4H |
Detected: |
true |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6449100 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2020-08-12 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1625013 |
Pattern: |
Diffuse |
Stage: |
TS13 |
Assay Id: |
MGI:6449639 |
Age: |
embryonic day 8.5 |
Image: |
4F |
Note: |
Diffuse cytoplasmic expression in epithelial lining of foregut. |
Specimen Label: |
4F |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5695578 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2015-11-12 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:3287320 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5695585 |
Age: |
embryonic day 12.5 |
Image: |
4B |
Note: |
Expression is along the basal surface of the intestinal epithelium. |
Specimen Label: |
4B |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5695578 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2015-11-12 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:3287322 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:5695585 |
Age: |
embryonic day 14.5 |
Image: |
4C |
Note: |
Expression is along the basal surface of the intestinal epithelium. |
Specimen Label: |
4C |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5695578 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2015-11-12 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:3287324 |
Pattern: |
Not Specified |
Stage: |
TS24 |
Assay Id: |
MGI:5695585 |
Age: |
embryonic day 16.5 |
Image: |
4D |
Note: |
Expression is along the basal surface of the intestinal epithelium. |
Specimen Label: |
4D |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5695578 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2015-11-12 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3287322 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:5695585 |
Age: |
embryonic day 14.5 |
Image: |
5A |
Note: |
Expression is along the basal surface of the intestinal epithelium. |
Specimen Label: |
5A |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1689428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691021 |
Age: |
postnatal adult |
Image: |
JAX_1306332 |
|
Specimen Label: |
JAX_1306332 |
Detected: |
true |
Specimen Num: |
10 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6449100 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2020-08-12 |
Strength: |
Weak |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
Pattern: |
Diffuse |
Stage: |
TS28 |
Assay Id: |
MGI:6449639 |
Age: |
postnatal adult |
Image: |
4A/B |
Note: |
Weak, diffuse expression in follicle cell surrounding oocytes and adjacent ovarian tissues. |
Specimen Label: |
4A/B |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6449100 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2020-08-12 |
Strength: |
Weak |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
Pattern: |
Diffuse |
Stage: |
TS28 |
Assay Id: |
MGI:6449639 |
Age: |
postnatal adult |
Image: |
4C/D |
Note: |
Weak, diffuse expression in follicle cell surrounding oocytes and adjacent ovarian tissues. |
Specimen Label: |
4C/D |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:912268 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-04-17 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3672922 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:7621322 |
Age: |
embryonic day 14.5 |
|
Note: |
Encoded in table as 'vasc (lymphs?)'. |
Specimen Label: |
Supplementary table 2 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
Publication |
First Author: |
Qian J |
Year: |
2011 |
Journal: |
J Immunol |
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6 |
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2905-14 |
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•
•
•
•
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Publication |
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Year: |
2010 |
Journal: |
J Immunol |
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Actin-bundling protein L-plastin regulates T cell activation. |
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185 |
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12 |
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7487-97 |
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•
•
•
•
•
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Publication |
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Year: |
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•
•
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Publication |
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Unpublished |
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Information obtained from The Jackson Laboratory, Bar Harbor, ME |
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JAX BSS Panel Mapping Data |
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Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
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Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
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Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
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Title: |
Annotation inferences using phylogenetic trees |
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
619
 |
Fragment?: |
false |
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Allele |
Name: |
lymphocyte cytosolic protein 1; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
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Publication |
First Author: |
Tseng HY |
Year: |
2018 |
Journal: |
J Cell Sci |
Title: |
LCP1 preferentially binds clasped αMβ2 integrin and attenuates leukocyte adhesion under flow. |
Volume: |
131 |
Issue: |
22 |
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Interaction Experiment |
Description: |
LCP1 preferentially binds clasped ?M?2 integrin and attenuates leukocyte adhesion under flow. |
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Strain |
Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
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