| Type |
Details |
Score |
| GXD Expression |
| Probe: |
MGI:7606321 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-02-27 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691020 |
| Pattern: |
Regionally restricted |
| Stage: |
TS20 |
| Assay Id: |
MGI:7606896 |
| Age: |
embryonic day 12.5 |
| Image: |
S5D 3 |
| Note: |
Expression was variable along the rostral-caudal axis, stronger in the caudal region. Dorsal-ventral changes were noted, stronger in the ventral region. |
| Specimen Label: |
S5D 3 |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7606321 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-02-27 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691020 |
| Pattern: |
Regionally restricted |
| Stage: |
TS20 |
| Assay Id: |
MGI:7606896 |
| Age: |
embryonic day 12.5 |
| Image: |
S5D 4 Caudal |
| Note: |
Expression was variable along the rostral-caudal axis, stronger in the caudal region. Dorsal-ventral changes were noted, stronger in the ventral region. |
| Specimen Label: |
S5D 4 Caudal |
| Detected: |
true |
| Specimen Num: |
5 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3284523 |
| Pattern: |
Widespread |
| Stage: |
TS23 |
| Assay Id: |
MGI:4945692 |
| Age: |
embryonic day 15.5 |
| Image: |
g01237 E15.5 |
|
| Specimen Label: |
g01237 E15.5 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3284528 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 7 |
| Image: |
g01237 P7 |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g01237 P7 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3284528 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 42 |
| Image: |
g01237 Adult |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g01237 Adult |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689619 |
| Pattern: |
Widespread |
| Stage: |
TS19 |
| Assay Id: |
MGI:4945692 |
| Age: |
embryonic day 11.5 |
| Image: |
g01237 E11.5 |
|
| Specimen Label: |
g01237 E11.5 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5811427 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2017-02-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603919 |
| Pattern: |
Regionally restricted |
| Stage: |
TS19 |
| Assay Id: |
MGI:5823659 |
| Age: |
embryonic day 11.5 |
| Image: |
Lypd6_b18_E11.5_8NOV13 |
| Note: |
Staining is similar to that observed at E10.5. At that time it was seen in the ear, somites, and presomitic mesoderm and/or trunk. |
| Specimen Label: |
Lypd6_b18_E11.5_8NOV13 |
| Detected: |
true |
| Specimen Num: |
9 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5811427 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2017-02-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603919 |
| Pattern: |
Regionally restricted |
| Stage: |
TS19 |
| Assay Id: |
MGI:5823659 |
| Age: |
embryonic day 11.5 |
| Image: |
Lypd6_b18_E11.5b_8NOV13 |
| Note: |
Staining is similar to that observed at E10.5. At that time it was seen in the ear, somites, and presomitic mesoderm and/or trunk. |
| Specimen Label: |
Lypd6_b18_E11.5b_8NOV13 |
| Detected: |
true |
| Specimen Num: |
10 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5811427 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2017-02-09 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3116917 |
| Pattern: |
Not Specified |
| Stage: |
TS17 |
| Assay Id: |
MGI:5823659 |
| Age: |
embryonic day 10.5 |
| Image: |
Lypd6_b18_E10.5a_3JULY13_JL |
|
| Specimen Label: |
Lypd6_b18_E10.5a_3JULY13_JL |
| Detected: |
true |
| Specimen Num: |
8 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3267328 |
| Pattern: |
Widespread |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 7 |
| Image: |
g01237 P7 |
|
| Specimen Label: |
g01237 P7 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3267328 |
| Pattern: |
Widespread |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 42 |
| Image: |
g01237 Adult |
|
| Specimen Label: |
g01237 Adult |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:1718528 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870435 |
|
| Specimen Label: |
UC Davis_1870435 |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1718528 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870416 |
|
| Specimen Label: |
UC Davis_1870416 |
| Detected: |
true |
| Specimen Num: |
12 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1718528 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870417 |
|
| Specimen Label: |
UC Davis_1870417 |
| Detected: |
true |
| Specimen Num: |
13 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1918028 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870428 |
| Note: |
vesicular gland |
| Specimen Label: |
UC Davis_1870428 |
| Detected: |
true |
| Specimen Num: |
24 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1797228 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870418 |
|
| Specimen Label: |
UC Davis_1870418 |
| Detected: |
true |
| Specimen Num: |
14 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3274128 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 7 |
| Image: |
g01237 P7 |
|
| Specimen Label: |
g01237 P7 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3274128 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 42 |
| Image: |
g01237 Adult |
|
| Specimen Label: |
g01237 Adult |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1928728 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870421 |
|
| Specimen Label: |
UC Davis_1870421 |
| Detected: |
true |
| Specimen Num: |
17 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1928728 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870422 |
|
| Specimen Label: |
UC Davis_1870422 |
| Detected: |
true |
| Specimen Num: |
18 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1609219 |
| Pattern: |
Widespread |
| Stage: |
TS19 |
| Assay Id: |
MGI:4945692 |
| Age: |
embryonic day 11.5 |
| Image: |
g01237 E11.5 |
|
| Specimen Label: |
g01237 E11.5 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3266028 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 7 |
| Image: |
g01237 P7 |
|
| Specimen Label: |
g01237 P7 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3266028 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 42 |
| Image: |
g01237 Adult |
|
| Specimen Label: |
g01237 Adult |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:1683328 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870429 |
|
| Specimen Label: |
UC Davis_1870429 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:1683328 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870430 |
|
| Specimen Label: |
UC Davis_1870430 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754028 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 7 |
| Image: |
g01237 P7 |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g01237 P7 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754028 |
| Pattern: |
Widespread |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 42 |
| Image: |
g01237 Adult |
|
| Specimen Label: |
g01237 Adult |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7423834 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2023-01-10 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3561422 |
|
| Stage: |
TS22 |
| Assay Id: |
MGI:7424932 |
| Age: |
embryonic day 13.5 |
| Image: |
S11 - E13.5 |
| Note: |
The ONL-OECs lack expression. |
| Specimen Label: |
S11 - E13.5 |
| Detected: |
false |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3280923 |
| Pattern: |
Widespread |
| Stage: |
TS23 |
| Assay Id: |
MGI:4945692 |
| Age: |
embryonic day 15.5 |
| Image: |
g01237 E15.5 |
|
| Specimen Label: |
g01237 E15.5 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3280928 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 7 |
| Image: |
g01237 P7 |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g01237 P7 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3280928 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 42 |
| Image: |
g01237 Adult |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g01237 Adult |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3266523 |
| Pattern: |
Widespread |
| Stage: |
TS23 |
| Assay Id: |
MGI:4945692 |
| Age: |
embryonic day 15.5 |
| Image: |
g01237 E15.5 |
|
| Specimen Label: |
g01237 E15.5 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1929028 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870419 |
|
| Specimen Label: |
UC Davis_1870419 |
| Detected: |
true |
| Specimen Num: |
15 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1929028 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870420 |
|
| Specimen Label: |
UC Davis_1870420 |
| Detected: |
true |
| Specimen Num: |
16 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:3276428 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870431 |
|
| Specimen Label: |
UC Davis_1870431 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4945692 |
| Age: |
embryonic day 15.5 |
| Image: |
g01237 E15.5 |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g01237 E15.5 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757728 |
| Pattern: |
Widespread |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 7 |
| Image: |
g01237 P7 |
|
| Specimen Label: |
g01237 P7 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4884887 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757728 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945692 |
| Age: |
postnatal day 42 |
| Image: |
g01237 Adult |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g01237 Adult |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7466947 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2023-04-28 |
| Strength: |
Absent |
| Sex: |
Female |
| Emaps: |
EMAPS:1738319 |
|
| Stage: |
TS19 |
| Assay Id: |
MGI:7467147 |
| Age: |
embryonic day 11.5 |
|
| Note: |
There is no expression in somatic cells. |
| Specimen Label: |
11.5 dpc - not shown |
| Detected: |
false |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7423834 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2023-01-10 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1779720 |
|
| Stage: |
TS20 |
| Assay Id: |
MGI:7424932 |
| Age: |
embryonic day 11.5 |
| Image: |
S11 - E11.5 |
| Note: |
The mucosal OECs lack expression. |
| Specimen Label: |
S11 - E11.5 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7423834 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2023-01-10 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1779722 |
|
| Stage: |
TS22 |
| Assay Id: |
MGI:7424932 |
| Age: |
embryonic day 13.5 |
| Image: |
S11 - E13.5 |
| Note: |
The mucosal OECs lack expression. |
| Specimen Label: |
S11 - E13.5 |
| Detected: |
false |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1868228 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870423 |
|
| Specimen Label: |
UC Davis_1870423 |
| Detected: |
true |
| Specimen Num: |
19 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1868228 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870424 |
|
| Specimen Label: |
UC Davis_1870424 |
| Detected: |
true |
| Specimen Num: |
20 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1868228 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6692676 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1870425 |
|
| Specimen Label: |
UC Davis_1870425 |
| Detected: |
true |
| Specimen Num: |
21 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yook C |
| Year: |
2019 |
| Journal: |
Front Mol Neurosci |
| Title: |
A TBR1-K228E Mutation Induces Tbr1 Upregulation, Altered Cortical Distribution of Interneurons, Increased Inhibitory Synaptic Transmission, and Autistic-Like Behavioral Deficits in Mice. |
| Volume: |
12 |
|
| Pages: |
241 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chen H |
| Year: |
2012 |
| Journal: |
PLoS One |
| Title: |
Identification of novel markers of mouse fetal ovary development. |
| Volume: |
7 |
| Issue: |
7 |
| Pages: |
e41683 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Moreau MX |
| Year: |
2021 |
| Journal: |
Development |
| Title: |
Single-cell transcriptomics of the early developing mouse cerebral cortex disentangle the spatial and temporal components of neuronal fate acquisition. |
| Volume: |
148 |
| Issue: |
14 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Perera SN |
| Year: |
2020 |
| Journal: |
Glia |
| Title: |
Insights into olfactory ensheathing cell development from a laser-microdissection and transcriptome-profiling approach. |
| Volume: |
68 |
| Issue: |
12 |
| Pages: |
2550-2584 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gineste C |
| Year: |
2013 |
| Journal: |
Neuromuscul Disord |
| Title: |
In vivo and in vitro investigations of heterozygous nebulin knock-out mice disclose a mild skeletal muscle phenotype. |
| Volume: |
23 |
| Issue: |
4 |
| Pages: |
357-69 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Schilling K |
| Year: |
2009 |
| Journal: |
Cerebellum |
| Title: |
The treasury of the commons: making use of public gene expression resources to better characterize the molecular diversity of inhibitory interneurons in the cerebellar cortex. |
| Volume: |
8 |
| Issue: |
4 |
| Pages: |
477-89 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lewandowski JP |
| Year: |
2015 |
| Journal: |
Dev Biol |
| Title: |
Spatiotemporal regulation of GLI target genes in the mammalian limb bud. |
| Volume: |
406 |
| Issue: |
1 |
| Pages: |
92-103 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tang T |
| Year: |
2010 |
| Journal: |
Nat Biotechnol |
| Title: |
A mouse knockout library for secreted and transmembrane proteins. |
| Volume: |
28 |
| Issue: |
7 |
| Pages: |
749-55 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lexicon Genetics, Inc |
| Year: |
2011 |
| Journal: |
Database Download |
| Title: |
MGI download of Lexicon knockout data |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Dickinson ME |
| Year: |
2016 |
| Journal: |
Nature |
| Title: |
High-throughput discovery of novel developmental phenotypes. |
| Volume: |
537 |
| Issue: |
7621 |
| Pages: |
508-514 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Function or Process or Component Unknown following Literature Review |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Koscielny G |
| Year: |
2014 |
| Journal: |
Nucleic Acids Res |
| Title: |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
| Volume: |
42 |
| Issue: |
Database issue |
| Pages: |
D802-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
International Knockout Mouse Consortium |
| Year: |
2014 |
| Journal: |
Database Download |
| Title: |
MGI download of modified allele data from IKMC and creation of new knockout alleles |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
International Mouse Strain Resource |
| Year: |
2014 |
| Journal: |
Database Download |
| Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wellcome Trust Sanger Institute |
| Year: |
2009 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
| Year: |
2014 |
| Journal: |
Database Release |
| Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2014 |
|
| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Magdaleno S |
| Year: |
2006 |
| Journal: |
PLoS Biol |
| Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
| Volume: |
4 |
| Issue: |
4 |
| Pages: |
e86 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Adams DJ |
| Year: |
2024 |
| Journal: |
Nature |
| Title: |
Genetic determinants of micronucleus formation in vivo. |
| Volume: |
627 |
| Issue: |
8002 |
| Pages: |
130-136 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGD Nomenclature Committee |
| Year: |
1995 |
|
| Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
GemPharmatech |
| Year: |
2020 |
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| Title: |
GemPharmatech Website. |
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•
•
•
•
•
|
| Publication |
| First Author: |
Skarnes WC |
| Year: |
2011 |
| Journal: |
Nature |
| Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
| Volume: |
474 |
| Issue: |
7351 |
| Pages: |
337-42 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Cyagen Biosciences Inc. |
| Year: |
2022 |
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| Title: |
Cyagen Biosciences Website. |
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•
•
•
•
•
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| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
GOA curators |
| Year: |
2016 |
|
| Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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•
•
•
•
•
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| Publication |
| First Author: |
Okazaki Y |
| Year: |
2002 |
| Journal: |
Nature |
| Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
| Volume: |
420 |
| Issue: |
6915 |
| Pages: |
563-73 |
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•
•
•
•
•
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| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2010 |
|
| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
•
•
•
•
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| Publication |
| First Author: |
Diez-Roux G |
| Year: |
2011 |
| Journal: |
PLoS Biol |
| Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
e1000582 |
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•
•
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•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
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| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
•
•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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|
•
•
•
•
•
|
| Publication |
| First Author: |
MGI Genome Annotation Group and UniGene Staff |
| Year: |
2015 |
| Journal: |
Database Download |
| Title: |
MGI-UniGene Interconnection Effort |
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|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
|
| Title: |
Annotation inferences using phylogenetic trees |
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•
•
•
•
•
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| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
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•
•
•
•
•
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| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
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•
•
•
•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
•
•
•
•
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| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
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•
•
•
•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
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•
•
•
•
•
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| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
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•
•
•
•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
|
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•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Arvaniti M |
| Year: |
2016 |
| Journal: |
J Neurochem |
| Title: |
Functional interaction between Lypd6 and nicotinic acetylcholine receptors. |
| Volume: |
138 |
| Issue: |
6 |
| Pages: |
806-20 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ochoa V |
| Year: |
2016 |
| Journal: |
FASEB J |
| Title: |
The prototoxin LYPD6B modulates heteromeric α3β4-containing nicotinic acetylcholine receptors, but not α7 homomers. |
| Volume: |
30 |
| Issue: |
3 |
| Pages: |
1109-19 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
This entry includes Ly6/PLAUR domain-containing protein 6 and Ly6/PLAUR domain-containing protein 6B (LYPD6/6B). They are prototoxins that belong to a larger family known as Ly-6/urokinase plasminogen activator receptor (Ly6/uPAR). They have 8-10 conserved cysteine residues that allow for the formation of disulfide bonds, constraining the protein to the 3-fingered motif secondary structure [].Ly6/PLAUR domain-containing protein 6 (LYPD6) is a higher eukaryotic protein expressed in neurons. It modulates nicotinic acetylcholine receptors by selectively increasing Ca2+-influx through this ion channel []. LYPD6 carries an LU protein domain - about 80 amino acids long characterised by a conserved pattern of 10 cysteine residues []. It is a positive feedback regulator of Wnt/beta-catenin signalling, e.g. for patterning of the mesoderm and neuroectoderm in zebrafish gastrulation, where Lypd6 is GPI-anchored to the plasma-membrane and interacts with the Wnt receptor Frizzled8 and the co-receptor Lrp6 [].LYPD6B has been shown to modulate heteromeric alpha3beta4-containing nicotinic acetylcholine receptors []. |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
172
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jensen MM |
| Year: |
2015 |
| Journal: |
Neurobiol Aging |
| Title: |
Prostate stem cell antigen interacts with nicotinic acetylcholine receptors and is affected in Alzheimer's disease. |
| Volume: |
36 |
| Issue: |
4 |
| Pages: |
1629-1638 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Demars MP |
| Year: |
2014 |
| Journal: |
Mol Brain |
| Title: |
Cortical parvalbumin and somatostatin GABA neurons express distinct endogenous modulators of nicotinic acetylcholine receptors. |
| Volume: |
7 |
|
| Pages: |
75 |
|
•
•
•
•
•
|