Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:7606321 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-27 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1691020 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:7606896 |
Age: |
embryonic day 12.5 |
Image: |
S5D 3 |
Note: |
Expression was variable along the rostral-caudal axis, stronger in the caudal region. Dorsal-ventral changes were noted, stronger in the ventral region. |
Specimen Label: |
S5D 3 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7606321 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-27 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1691020 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:7606896 |
Age: |
embryonic day 12.5 |
Image: |
S5D 4 Caudal |
Note: |
Expression was variable along the rostral-caudal axis, stronger in the caudal region. Dorsal-ventral changes were noted, stronger in the ventral region. |
Specimen Label: |
S5D 4 Caudal |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3284523 |
Pattern: |
Widespread |
Stage: |
TS23 |
Assay Id: |
MGI:4945692 |
Age: |
embryonic day 15.5 |
Image: |
g01237 E15.5 |
|
Specimen Label: |
g01237 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:3284528 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 7 |
Image: |
g01237 P7 |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g01237 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3284528 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 42 |
Image: |
g01237 Adult |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g01237 Adult |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689619 |
Pattern: |
Widespread |
Stage: |
TS19 |
Assay Id: |
MGI:4945692 |
Age: |
embryonic day 11.5 |
Image: |
g01237 E11.5 |
|
Specimen Label: |
g01237 E11.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5811427 |
Assay Type: |
RNA in situ |
Annotation Date: |
2017-02-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603919 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:5823659 |
Age: |
embryonic day 11.5 |
Image: |
Lypd6_b18_E11.5_8NOV13 |
Note: |
Staining is similar to that observed at E10.5. At that time it was seen in the ear, somites, and presomitic mesoderm and/or trunk. |
Specimen Label: |
Lypd6_b18_E11.5_8NOV13 |
Detected: |
true |
Specimen Num: |
9 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5811427 |
Assay Type: |
RNA in situ |
Annotation Date: |
2017-02-09 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603919 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:5823659 |
Age: |
embryonic day 11.5 |
Image: |
Lypd6_b18_E11.5b_8NOV13 |
Note: |
Staining is similar to that observed at E10.5. At that time it was seen in the ear, somites, and presomitic mesoderm and/or trunk. |
Specimen Label: |
Lypd6_b18_E11.5b_8NOV13 |
Detected: |
true |
Specimen Num: |
10 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5811427 |
Assay Type: |
RNA in situ |
Annotation Date: |
2017-02-09 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:3116917 |
Pattern: |
Not Specified |
Stage: |
TS17 |
Assay Id: |
MGI:5823659 |
Age: |
embryonic day 10.5 |
Image: |
Lypd6_b18_E10.5a_3JULY13_JL |
|
Specimen Label: |
Lypd6_b18_E10.5a_3JULY13_JL |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3267328 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 7 |
Image: |
g01237 P7 |
|
Specimen Label: |
g01237 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3267328 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 42 |
Image: |
g01237 Adult |
|
Specimen Label: |
g01237 Adult |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1718528 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870435 |
|
Specimen Label: |
UC Davis_1870435 |
Detected: |
true |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1718528 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870416 |
|
Specimen Label: |
UC Davis_1870416 |
Detected: |
true |
Specimen Num: |
12 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1718528 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870417 |
|
Specimen Label: |
UC Davis_1870417 |
Detected: |
true |
Specimen Num: |
13 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1918028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870428 |
Note: |
vesicular gland |
Specimen Label: |
UC Davis_1870428 |
Detected: |
true |
Specimen Num: |
24 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1797228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870418 |
|
Specimen Label: |
UC Davis_1870418 |
Detected: |
true |
Specimen Num: |
14 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3274128 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 7 |
Image: |
g01237 P7 |
|
Specimen Label: |
g01237 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3274128 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 42 |
Image: |
g01237 Adult |
|
Specimen Label: |
g01237 Adult |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1928728 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870421 |
|
Specimen Label: |
UC Davis_1870421 |
Detected: |
true |
Specimen Num: |
17 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1928728 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870422 |
|
Specimen Label: |
UC Davis_1870422 |
Detected: |
true |
Specimen Num: |
18 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1609219 |
Pattern: |
Widespread |
Stage: |
TS19 |
Assay Id: |
MGI:4945692 |
Age: |
embryonic day 11.5 |
Image: |
g01237 E11.5 |
|
Specimen Label: |
g01237 E11.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3266028 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 7 |
Image: |
g01237 P7 |
|
Specimen Label: |
g01237 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3266028 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 42 |
Image: |
g01237 Adult |
|
Specimen Label: |
g01237 Adult |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1683328 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870429 |
|
Specimen Label: |
UC Davis_1870429 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1683328 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870430 |
|
Specimen Label: |
UC Davis_1870430 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754028 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 7 |
Image: |
g01237 P7 |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g01237 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754028 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 42 |
Image: |
g01237 Adult |
|
Specimen Label: |
g01237 Adult |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7423834 |
Assay Type: |
RNA in situ |
Annotation Date: |
2023-01-10 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:3561422 |
|
Stage: |
TS22 |
Assay Id: |
MGI:7424932 |
Age: |
embryonic day 13.5 |
Image: |
S11 - E13.5 |
Note: |
The ONL-OECs lack expression. |
Specimen Label: |
S11 - E13.5 |
Detected: |
false |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3280923 |
Pattern: |
Widespread |
Stage: |
TS23 |
Assay Id: |
MGI:4945692 |
Age: |
embryonic day 15.5 |
Image: |
g01237 E15.5 |
|
Specimen Label: |
g01237 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3280928 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 7 |
Image: |
g01237 P7 |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g01237 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3280928 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 42 |
Image: |
g01237 Adult |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g01237 Adult |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3266523 |
Pattern: |
Widespread |
Stage: |
TS23 |
Assay Id: |
MGI:4945692 |
Age: |
embryonic day 15.5 |
Image: |
g01237 E15.5 |
|
Specimen Label: |
g01237 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1929028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870419 |
|
Specimen Label: |
UC Davis_1870419 |
Detected: |
true |
Specimen Num: |
15 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1929028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870420 |
|
Specimen Label: |
UC Davis_1870420 |
Detected: |
true |
Specimen Num: |
16 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3276428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870431 |
|
Specimen Label: |
UC Davis_1870431 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4945692 |
Age: |
embryonic day 15.5 |
Image: |
g01237 E15.5 |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g01237 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757728 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 7 |
Image: |
g01237 P7 |
|
Specimen Label: |
g01237 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4884887 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757728 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:4945692 |
Age: |
postnatal day 42 |
Image: |
g01237 Adult |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g01237 Adult |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7466947 |
Assay Type: |
RNA in situ |
Annotation Date: |
2023-04-28 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:1738319 |
|
Stage: |
TS19 |
Assay Id: |
MGI:7467147 |
Age: |
embryonic day 11.5 |
|
Note: |
There is no expression in somatic cells. |
Specimen Label: |
11.5 dpc - not shown |
Detected: |
false |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7423834 |
Assay Type: |
RNA in situ |
Annotation Date: |
2023-01-10 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1779720 |
|
Stage: |
TS20 |
Assay Id: |
MGI:7424932 |
Age: |
embryonic day 11.5 |
Image: |
S11 - E11.5 |
Note: |
The mucosal OECs lack expression. |
Specimen Label: |
S11 - E11.5 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7423834 |
Assay Type: |
RNA in situ |
Annotation Date: |
2023-01-10 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:1779722 |
|
Stage: |
TS22 |
Assay Id: |
MGI:7424932 |
Age: |
embryonic day 13.5 |
Image: |
S11 - E13.5 |
Note: |
The mucosal OECs lack expression. |
Specimen Label: |
S11 - E13.5 |
Detected: |
false |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1868228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870423 |
|
Specimen Label: |
UC Davis_1870423 |
Detected: |
true |
Specimen Num: |
19 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1868228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870424 |
|
Specimen Label: |
UC Davis_1870424 |
Detected: |
true |
Specimen Num: |
20 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1868228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692676 |
Age: |
postnatal adult |
Image: |
UC Davis_1870425 |
|
Specimen Label: |
UC Davis_1870425 |
Detected: |
true |
Specimen Num: |
21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yook C |
Year: |
2019 |
Journal: |
Front Mol Neurosci |
Title: |
A TBR1-K228E Mutation Induces Tbr1 Upregulation, Altered Cortical Distribution of Interneurons, Increased Inhibitory Synaptic Transmission, and Autistic-Like Behavioral Deficits in Mice. |
Volume: |
12 |
|
Pages: |
241 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen H |
Year: |
2012 |
Journal: |
PLoS One |
Title: |
Identification of novel markers of mouse fetal ovary development. |
Volume: |
7 |
Issue: |
7 |
Pages: |
e41683 |
|
•
•
•
•
•
|
Publication |
First Author: |
Moreau MX |
Year: |
2021 |
Journal: |
Development |
Title: |
Single-cell transcriptomics of the early developing mouse cerebral cortex disentangle the spatial and temporal components of neuronal fate acquisition. |
Volume: |
148 |
Issue: |
14 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Perera SN |
Year: |
2020 |
Journal: |
Glia |
Title: |
Insights into olfactory ensheathing cell development from a laser-microdissection and transcriptome-profiling approach. |
Volume: |
68 |
Issue: |
12 |
Pages: |
2550-2584 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gineste C |
Year: |
2013 |
Journal: |
Neuromuscul Disord |
Title: |
In vivo and in vitro investigations of heterozygous nebulin knock-out mice disclose a mild skeletal muscle phenotype. |
Volume: |
23 |
Issue: |
4 |
Pages: |
357-69 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schilling K |
Year: |
2009 |
Journal: |
Cerebellum |
Title: |
The treasury of the commons: making use of public gene expression resources to better characterize the molecular diversity of inhibitory interneurons in the cerebellar cortex. |
Volume: |
8 |
Issue: |
4 |
Pages: |
477-89 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lewandowski JP |
Year: |
2015 |
Journal: |
Dev Biol |
Title: |
Spatiotemporal regulation of GLI target genes in the mammalian limb bud. |
Volume: |
406 |
Issue: |
1 |
Pages: |
92-103 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tang T |
Year: |
2010 |
Journal: |
Nat Biotechnol |
Title: |
A mouse knockout library for secreted and transmembrane proteins. |
Volume: |
28 |
Issue: |
7 |
Pages: |
749-55 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lexicon Genetics, Inc |
Year: |
2011 |
Journal: |
Database Download |
Title: |
MGI download of Lexicon knockout data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Dickinson ME |
Year: |
2016 |
Journal: |
Nature |
Title: |
High-throughput discovery of novel developmental phenotypes. |
Volume: |
537 |
Issue: |
7621 |
Pages: |
508-514 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Function or Process or Component Unknown following Literature Review |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Koscielny G |
Year: |
2014 |
Journal: |
Nucleic Acids Res |
Title: |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
Volume: |
42 |
Issue: |
Database issue |
Pages: |
D802-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
International Knockout Mouse Consortium |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of modified allele data from IKMC and creation of new knockout alleles |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
International Mouse Strain Resource |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Wellcome Trust Sanger Institute |
Year: |
2009 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
|
•
•
•
•
•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Skarnes WC |
Year: |
2011 |
Journal: |
Nature |
Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
Volume: |
474 |
Issue: |
7351 |
Pages: |
337-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
2022 |
|
Title: |
Cyagen Biosciences Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Arvaniti M |
Year: |
2016 |
Journal: |
J Neurochem |
Title: |
Functional interaction between Lypd6 and nicotinic acetylcholine receptors. |
Volume: |
138 |
Issue: |
6 |
Pages: |
806-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ochoa V |
Year: |
2016 |
Journal: |
FASEB J |
Title: |
The prototoxin LYPD6B modulates heteromeric α3β4-containing nicotinic acetylcholine receptors, but not α7 homomers. |
Volume: |
30 |
Issue: |
3 |
Pages: |
1109-19 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry includes Ly6/PLAUR domain-containing protein 6 and Ly6/PLAUR domain-containing protein 6B (LYPD6/6B). They are prototoxins that belong to a larger family known as Ly-6/urokinase plasminogen activator receptor (Ly6/uPAR). They have 8-10 conserved cysteine residues that allow for the formation of disulfide bonds, constraining the protein to the 3-fingered motif secondary structure [].Ly6/PLAUR domain-containing protein 6 (LYPD6) is a higher eukaryotic protein expressed in neurons. It modulates nicotinic acetylcholine receptors by selectively increasing Ca2+-influx through this ion channel []. LYPD6 carries an LU protein domain - about 80 amino acids long characterised by a conserved pattern of 10 cysteine residues []. It is a positive feedback regulator of Wnt/beta-catenin signalling, e.g. for patterning of the mesoderm and neuroectoderm in zebrafish gastrulation, where Lypd6 is GPI-anchored to the plasma-membrane and interacts with the Wnt receptor Frizzled8 and the co-receptor Lrp6 [].LYPD6B has been shown to modulate heteromeric alpha3beta4-containing nicotinic acetylcholine receptors []. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
172
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Jensen MM |
Year: |
2015 |
Journal: |
Neurobiol Aging |
Title: |
Prostate stem cell antigen interacts with nicotinic acetylcholine receptors and is affected in Alzheimer's disease. |
Volume: |
36 |
Issue: |
4 |
Pages: |
1629-1638 |
|
•
•
•
•
•
|
Publication |
First Author: |
Demars MP |
Year: |
2014 |
Journal: |
Mol Brain |
Title: |
Cortical parvalbumin and somatostatin GABA neurons express distinct endogenous modulators of nicotinic acetylcholine receptors. |
Volume: |
7 |
|
Pages: |
75 |
|
•
•
•
•
•
|