| Type |
Details |
Score |
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603919 |
| Pattern: |
Not Specified |
| Stage: |
TS19 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 11.5 |
| Image: |
5j |
| Note: |
Expression is markedly reduced across all axial levels compared to earlier gestational times. |
| Specimen Label: |
5j |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603921 |
| Pattern: |
Regionally restricted |
| Stage: |
TS21 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 13.5 |
| Image: |
6a' E13.5 |
| Note: |
Expression is present in the notochord. |
| Specimen Label: |
6a' E13.5 |
| Detected: |
true |
| Specimen Num: |
13 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1380106 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603915 |
| Pattern: |
Not Specified |
| Stage: |
TS15 |
| Assay Id: |
MGI:5295461 |
| Age: |
embryonic day 9.5 |
| Image: |
S2-1a |
|
| Specimen Label: |
S2-1a |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1380106 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603915 |
| Pattern: |
Not Specified |
| Stage: |
TS15 |
| Assay Id: |
MGI:5295461 |
| Age: |
embryonic day 9.5 |
| Image: |
S2-1b |
|
| Specimen Label: |
S2-1b |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1380106 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603917 |
| Pattern: |
Not Specified |
| Stage: |
TS17 |
| Assay Id: |
MGI:5295461 |
| Age: |
embryonic day 10.5 |
| Image: |
S2-1d |
|
| Specimen Label: |
S2-1d |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1380106 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603917 |
| Pattern: |
Not Specified |
| Stage: |
TS17 |
| Assay Id: |
MGI:5295461 |
| Age: |
embryonic day 10.5 |
| Image: |
S2-1e |
|
| Specimen Label: |
S2-1e |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1380106 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603917 |
| Pattern: |
Not Specified |
| Stage: |
TS17 |
| Assay Id: |
MGI:5295461 |
| Age: |
embryonic day 10.5 |
| Image: |
S2-1f |
|
| Specimen Label: |
S2-1f |
| Detected: |
true |
| Specimen Num: |
5 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1380106 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603919 |
| Pattern: |
Not Specified |
| Stage: |
TS19 |
| Assay Id: |
MGI:5295461 |
| Age: |
embryonic day 11.5 |
| Image: |
S2-1j |
|
| Specimen Label: |
S2-1j |
| Detected: |
true |
| Specimen Num: |
6 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1380106 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603919 |
| Pattern: |
Not Specified |
| Stage: |
TS19 |
| Assay Id: |
MGI:5295461 |
| Age: |
embryonic day 11.5 |
| Image: |
S2-1k/l |
|
| Specimen Label: |
S2-1k/l |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1380106 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603919 |
| Pattern: |
Not Specified |
| Stage: |
TS19 |
| Assay Id: |
MGI:5295461 |
| Age: |
embryonic day 11.5 |
| Image: |
S2-1m/n |
|
| Specimen Label: |
S2-1m/n |
| Detected: |
true |
| Specimen Num: |
8 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295076 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603917 |
| Pattern: |
Not Specified |
| Stage: |
TS17 |
| Assay Id: |
MGI:5295462 |
| Age: |
embryonic day 10.25 |
| Image: |
S2-2a |
|
| Specimen Label: |
S2-2a |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295076 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-10 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1603918 |
| Pattern: |
Not Specified |
| Stage: |
TS18 |
| Assay Id: |
MGI:5295462 |
| Age: |
embryonic day 11.0 |
| Image: |
S2-2b |
|
| Specimen Label: |
S2-2b |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3185815 |
| Pattern: |
Not Specified |
| Stage: |
TS15 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 9.5 |
| Image: |
5a |
| Note: |
There is weak expression in anterior craniofacial/branchial arch tissue. |
| Specimen Label: |
5a |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3185815 |
| Pattern: |
Not Specified |
| Stage: |
TS15 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 9.5 |
| Image: |
5b |
| Note: |
There is weak expression in anterior craniofacial/branchial arch tissue. |
| Specimen Label: |
5b |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757820 |
| Pattern: |
Not Specified |
| Stage: |
TS20 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 12.5 |
| Image: |
6a' E12.5 |
|
| Specimen Label: |
6a' E12.5 |
| Detected: |
true |
| Specimen Num: |
12 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4418145 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-01-19 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1752421 |
| Pattern: |
Regionally restricted |
| Stage: |
TS21 |
| Assay Id: |
MGI:4418204 |
| Age: |
embryonic day 13.5 |
|
| Note: |
Expression is present in the hair follicles of the skin. |
| Specimen Label: |
3I |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1735720 |
| Pattern: |
Not Specified |
| Stage: |
TS20 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 12.5 |
| Image: |
6b'o |
|
| Specimen Label: |
6b'o |
| Detected: |
true |
| Specimen Num: |
15 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1927921 |
| Pattern: |
Regionally restricted |
| Stage: |
TS21 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 13.5 |
| Image: |
6b't |
| Note: |
Expression is present in epithelial cells lining the future ureteric ducts. Shown at higher magnification in the red inset. |
| Specimen Label: |
6b't |
| Detected: |
true |
| Specimen Num: |
20 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4418145 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-01-19 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1758921 |
| Pattern: |
Not Specified |
| Stage: |
TS21 |
| Assay Id: |
MGI:4418204 |
| Age: |
embryonic day 13.5 |
|
|
| Specimen Label: |
3I |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1666915 |
|
| Stage: |
TS15 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 9.5 |
| Image: |
5a |
| Note: |
There is no expression in the otic capsule. |
| Specimen Label: |
5a |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1666915 |
|
| Stage: |
TS15 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 9.5 |
| Image: |
5b |
| Note: |
There is no expression in the otic capsule. |
| Specimen Label: |
5b |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4418145 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-01-19 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1677919 |
| Pattern: |
Not Specified |
| Stage: |
TS19 |
| Assay Id: |
MGI:4418204 |
| Age: |
embryonic day 11.5 |
|
|
| Specimen Label: |
3C |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1677917 |
| Pattern: |
Not Specified |
| Stage: |
TS17 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 10.5 |
| Image: |
5d |
|
| Specimen Label: |
5d |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1677919 |
| Pattern: |
Not Specified |
| Stage: |
TS19 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 11.5 |
| Image: |
5j |
|
| Specimen Label: |
5j |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3643721 |
| Pattern: |
Not Specified |
| Stage: |
TS21 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 13.5 |
| Image: |
6b't |
| Note: |
Expression is present in the nephrogenic mesenchyme of the developing kidney. Shown at higher magnification in the blue inset. |
| Specimen Label: |
6b't |
| Detected: |
true |
| Specimen Num: |
20 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4418145 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-01-19 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1741220 |
| Pattern: |
Not Specified |
| Stage: |
TS20 |
| Assay Id: |
MGI:4418204 |
| Age: |
embryonic day 12.5 |
|
|
| Specimen Label: |
3F |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4418145 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-01-19 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1741221 |
| Pattern: |
Not Specified |
| Stage: |
TS21 |
| Assay Id: |
MGI:4418204 |
| Age: |
embryonic day 13.5 |
|
|
| Specimen Label: |
3I |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6506552 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2021-02-17 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:2760524 |
|
| Stage: |
TS24 |
| Assay Id: |
MGI:6506752 |
| Age: |
embryonic day 16.5 |
|
|
| Specimen Label: |
not shown |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1611719 |
| Pattern: |
Not Specified |
| Stage: |
TS19 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 11.5 |
| Image: |
5j |
|
| Specimen Label: |
5j |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1611715 |
| Pattern: |
Not Specified |
| Stage: |
TS15 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 9.5 |
| Image: |
5a |
| Note: |
There is weak expression in anterior craniofacial/branchial arch tissue. |
| Specimen Label: |
5a |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1611715 |
| Pattern: |
Not Specified |
| Stage: |
TS15 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 9.5 |
| Image: |
5b |
| Note: |
There is weak expression in anterior craniofacial/branchial arch tissue. |
| Specimen Label: |
5b |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1929028 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691334 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1862166 |
|
| Specimen Label: |
UC Davis_1862166 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1619115 |
| Pattern: |
Not Specified |
| Stage: |
TS15 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 9.5 |
| Image: |
5b |
|
| Specimen Label: |
5b |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1619117 |
| Pattern: |
Not Specified |
| Stage: |
TS17 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 10.5 |
| Image: |
5e/f |
| Note: |
Expression is present in the anterior notochord. |
| Specimen Label: |
5e/f |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1619119 |
|
| Stage: |
TS19 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 11.5 |
| Image: |
5k/l |
| Note: |
There is no expression in the anterior domains. |
| Specimen Label: |
5k/l |
| Detected: |
false |
| Specimen Num: |
8 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Trace |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1619119 |
| Pattern: |
Regionally restricted |
| Stage: |
TS19 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 11.5 |
| Image: |
5m/n |
| Note: |
There is minimal expression in caudal domains at the level of the hindlimb bud. |
| Specimen Label: |
5m/n |
| Detected: |
true |
| Specimen Num: |
9 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1619117 |
| Pattern: |
Not Specified |
| Stage: |
TS17 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 10.5 |
| Image: |
6a' E10.5 |
| Note: |
Inset shows higher magnification of staining in the notochord. |
| Specimen Label: |
6a' E10.5 |
| Detected: |
true |
| Specimen Num: |
10 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1619119 |
| Pattern: |
Not Specified |
| Stage: |
TS19 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 11.5 |
| Image: |
6a' E11.5 |
|
| Specimen Label: |
6a' E11.5 |
| Detected: |
true |
| Specimen Num: |
11 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1619120 |
| Pattern: |
Not Specified |
| Stage: |
TS20 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 12.5 |
| Image: |
6a' E12.5 |
|
| Specimen Label: |
6a' E12.5 |
| Detected: |
true |
| Specimen Num: |
12 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1689428 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691334 |
| Age: |
postnatal adult |
| Image: |
UC Davis_1862168 |
|
| Specimen Label: |
UC Davis_1862168 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5295077 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-11-09 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1638817 |
| Pattern: |
Not Specified |
| Stage: |
TS17 |
| Assay Id: |
MGI:5295413 |
| Age: |
embryonic day 10.5 |
| Image: |
5d |
|
| Specimen Label: |
5d |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Vranka JA |
| Year: |
2004 |
| Journal: |
J Biol Chem |
| Title: |
Prolyl 3-hydroxylase 1, enzyme characterization and identification of a novel family of enzymes. |
| Volume: |
279 |
| Issue: |
22 |
| Pages: |
23615-21 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Vranka J |
| Year: |
2009 |
| Journal: |
Cell Struct Funct |
| Title: |
Expression of prolyl 3-hydroxylase genes in embryonic and adult mouse tissues. |
| Volume: |
34 |
| Issue: |
2 |
| Pages: |
97-104 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Heard ME |
| Year: |
2016 |
| Journal: |
PLoS Genet |
| Title: |
Sc65-Null Mice Provide Evidence for a Novel Endoplasmic Reticulum Complex Regulating Collagen Lysyl Hydroxylation. |
| Volume: |
12 |
| Issue: |
4 |
| Pages: |
e1006002 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ansari-Lari MA |
| Year: |
1998 |
| Journal: |
Genome Res |
| Title: |
Comparative sequence analysis of a gene-rich cluster at human chromosome 12p13 and its syntenic region in mouse chromosome 6. |
| Volume: |
8 |
| Issue: |
1 |
| Pages: |
29-40 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Capellini TD |
| Year: |
2008 |
| Journal: |
Genesis |
| Title: |
Conservation of notochord gene expression across chordates: insights from the Leprecan gene family. |
| Volume: |
46 |
| Issue: |
11 |
| Pages: |
683-96 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Rutledge EA |
| Year: |
2017 |
| Journal: |
Development |
| Title: |
Cellular heterogeneity in the ureteric progenitor niche and distinct profiles of branching morphogenesis in organ development. |
| Volume: |
144 |
| Issue: |
17 |
| Pages: |
3177-3188 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
GO Central curators, GOA curators, Rhea curators |
| Year: |
2020 |
|
| Title: |
Automatic Gene Ontology annotation based on Rhea mapping |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Dickinson ME |
| Year: |
2016 |
| Journal: |
Nature |
| Title: |
High-throughput discovery of novel developmental phenotypes. |
| Volume: |
537 |
| Issue: |
7621 |
| Pages: |
508-514 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
GOA curators, MGI curators |
| Year: |
2001 |
|
| Title: |
Gene Ontology annotation based on Enzyme Commission mapping |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Koscielny G |
| Year: |
2014 |
| Journal: |
Nucleic Acids Res |
| Title: |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
| Volume: |
42 |
| Issue: |
Database issue |
| Pages: |
D802-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
International Knockout Mouse Consortium |
| Year: |
2014 |
| Journal: |
Database Download |
| Title: |
MGI download of modified allele data from IKMC and creation of new knockout alleles |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Velocigene |
| Year: |
2008 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
International Mouse Strain Resource |
| Year: |
2014 |
| Journal: |
Database Download |
| Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
| Year: |
2014 |
| Journal: |
Database Release |
| Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hansen GM |
| Year: |
2008 |
| Journal: |
Genome Res |
| Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
| Volume: |
18 |
| Issue: |
10 |
| Pages: |
1670-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Helmholtz Zentrum Muenchen GmbH |
| Year: |
2010 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
| Year: |
2001 |
|
| Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2003 |
|
| Title: |
MGI Sequence Curation Reference |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Carninci P |
| Year: |
2005 |
| Journal: |
Science |
| Title: |
The transcriptional landscape of the mammalian genome. |
| Volume: |
309 |
| Issue: |
5740 |
| Pages: |
1559-63 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Adams DJ |
| Year: |
2024 |
| Journal: |
Nature |
| Title: |
Genetic determinants of micronucleus formation in vivo. |
| Volume: |
627 |
| Issue: |
8002 |
| Pages: |
130-136 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGD Nomenclature Committee |
| Year: |
1995 |
|
| Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
| Year: |
2008 |
| Journal: |
Database Download |
| Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Cyagen Biosciences Inc. |
| Year: |
2022 |
|
| Title: |
Cyagen Biosciences Website. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
GOA curators |
| Year: |
2016 |
|
| Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2010 |
|
| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGI Genome Annotation Group and UniGene Staff |
| Year: |
2015 |
| Journal: |
Database Download |
| Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
|
| Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
| Allele |
| Name: |
transgene insertion 1, M Katharine Rudd |
| Allele Type: |
Transgenic |
| Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
| Allele |
| Name: |
transgene insertion 5, M Katharine Rudd |
| Allele Type: |
Transgenic |
| Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ozdemir AC |
| Year: |
2017 |
| Journal: |
PLoS One |
| Title: |
GNB3 overexpression causes obesity and metabolic syndrome. |
| Volume: |
12 |
| Issue: |
12 |
| Pages: |
e0188763 |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Tg(RP11-578M14)5Mkru/? |
| Background: |
involves: FVB/N |
| Zygosity: |
ot |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Tg(RP11-578M14)1Mkru/? |
| Background: |
involves: FVB/N |
| Zygosity: |
ot |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
This entry represents prolyl 3-hydroxylase, including prolyl 3-hydroxylase catalyses 1-3 (P3H1-3) from humans. P3H1, also known as leprecan-1, is responsible for converting proline to 3-hydroxyproline (3Hyp) in type I collagen. P3H2 is responsible for 3-hydroxylating multiple proline sites in collagen types I, II, IV, and V []. However, P3H3 is not required for normal prolyl 3-hydroxylation on collagen chains []. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Goldlust IS |
| Year: |
2013 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Mouse model implicates GNB3 duplication in a childhood obesity syndrome. |
| Volume: |
110 |
| Issue: |
37 |
| Pages: |
14990-4 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tiainen P |
| Year: |
2008 |
| Journal: |
J Biol Chem |
| Title: |
Characterization of recombinant human prolyl 3-hydroxylase isoenzyme 2, an enzyme modifying the basement membrane collagen IV. |
| Volume: |
283 |
| Issue: |
28 |
| Pages: |
19432-9 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
363
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
739
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
703
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
748
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
746
 |
| Fragment?: |
false |
|
•
•
•
•
•
|